RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W ECM8P38246 354 aa4.06□□□□□ -1.76
VPS29YHR012W PEX32P38292 413 aa4.06□□□□□ -1.76
VPS29YHR012W LNP1P38878 278 aa4.06□□□□□ -1.76
VPS29YHR012W MDM31P38880 579 aa4.06□□□□□ -1.76
VPS29YHR012W RMD6P39975 231 aa4.06□□□□□ -1.76
VPS29YHR012W YDL186WP48568 277 aa4.06□□□□□ -1.76
VPS29YHR012W NSA1P53136 463 aaPredicted RBP4.06□□□□□ -1.76
VPS29YHR012W ASI3P53983 676 aa4.06□□□□□ -1.76
VPS29YHR012W YLR152CP54072 576 aa4.06□□□□□ -1.76
VPS29YHR012W TMA20P89886 181 aaPredicted RBP4.06□□□□□ -1.76
VPS29YHR012W YMD8Q03697 442 aa4.06□□□□□ -1.76
VPS29YHR012W FIN1Q03898 291 aa4.06□□□□□ -1.76
VPS29YHR012W ADH6Q04894 360 aaKnown RBP4.06□□□□□ -1.76
VPS29YHR012W SPR28Q04921 423 aa4.06□□□□□ -1.76
VPS29YHR012W TSR2Q06672 205 aaKnown RBP4.06□□□□□ -1.76
VPS29YHR012W SSK1Q07084 712 aa4.06□□□□□ -1.76
VPS29YHR012W LOT6Q07923 191 aa4.06□□□□□ -1.76
VPS29YHR012W RAX2Q12465 1220 aa4.06□□□□□ -1.76
VPS29YHR012W YGR035W-AQ45U48 73 aa4.06□□□□□ -1.76
VPS29YHR012W SGA1P08019 549 aa4.05□□□□□ -1.76
VPS29YHR012W YER190C-BP0CX94 160 aa4.05□□□□□ -1.76
VPS29YHR012W YEL077W-AP0CX95 160 aa4.05□□□□□ -1.76
VPS29YHR012W YGR296C-BP0CX96 160 aa4.05□□□□□ -1.76
VPS29YHR012W YPL283W-BP0CX97 160 aa4.05□□□□□ -1.76
VPS29YHR012W YPR204C-AP0CX98 160 aa4.05□□□□□ -1.76
VPS29YHR012W YFL068WP0CX99 160 aa4.05□□□□□ -1.76
VPS29YHR012W YLL066W-AP0CY00 160 aa4.05□□□□□ -1.76
VPS29YHR012W YLL067W-AP0CY01 160 aa4.05□□□□□ -1.76
VPS29YHR012W SAG1P20840 650 aa4.05□□□□□ -1.76
VPS29YHR012W RPA135P22138 1203 aaKnown RBP4.05□□□□□ -1.76
VPS29YHR012W HXT2P23585 541 aa4.05□□□□□ -1.76
VPS29YHR012W PCL1P24867 279 aa4.05□□□□□ -1.76
VPS29YHR012W MTH1P35198 433 aa4.05□□□□□ -1.76
VPS29YHR012W BAP2P38084 609 aa4.05□□□□□ -1.76
VPS29YHR012W THI2P38141 450 aa4.05□□□□□ -1.76
VPS29YHR012W YBR285WP38354 144 aa4.05□□□□□ -1.76
VPS29YHR012W YLF2P38746 405 aa4.05□□□□□ -1.76
VPS29YHR012W YHR035WP38769 630 aa4.05□□□□□ -1.76
VPS29YHR012W AVT4P50944 713 aa4.05□□□□□ -1.76
VPS29YHR012W MRH4P53166 561 aa4.05□□□□□ -1.76
VPS29YHR012W NOG1Q02892 647 aaKnown RBP4.05□□□□□ -1.76
VPS29YHR012W SMP3Q04174 516 aa4.05□□□□□ -1.76
VPS29YHR012W YDR514CQ04408 483 aa4.05□□□□□ -1.76
VPS29YHR012W ECM18Q04623 453 aa4.05□□□□□ -1.76
VPS29YHR012W LIP2Q06005 328 aa4.05□□□□□ -1.76
VPS29YHR012W THP3Q12049 470 aaKnown RBP4.05□□□□□ -1.76
VPS29YHR012W DYN1P36022 4092 aa4.05□□□□□ -1.76
VPS29YHR012W RPL25P04456 142 aaKnown RBP4.04□□□□□ -1.76
VPS29YHR012W ILV5P06168 395 aaKnown RBP4.04□□□□□ -1.76
VPS29YHR012W IDP1P21954 428 aaKnown RBP4.04□□□□□ -1.76
VPS29YHR012W AFG1P32317 509 aa4.04□□□□□ -1.76
VPS29YHR012W SDS22P36047 338 aa4.04□□□□□ -1.76
VPS29YHR012W YER079WP40052 210 aaKnown RBP4.04□□□□□ -1.76
VPS29YHR012W YRB2P40517 327 aa4.04□□□□□ -1.76
VPS29YHR012W QRI7P43122 407 aa4.04□□□□□ -1.76
VPS29YHR012W PMT5P52867 743 aa4.04□□□□□ -1.76
VPS29YHR012W YGL114WP53134 725 aa4.04□□□□□ -1.76
VPS29YHR012W SAY1P53324 424 aa4.04□□□□□ -1.76
VPS29YHR012W RNH201P53942 307 aa4.04□□□□□ -1.76
VPS29YHR012W YDR179W-AQ03983 463 aa4.04□□□□□ -1.76
VPS29YHR012W GRC3Q07845 632 aa4.04□□□□□ -1.76
VPS29YHR012W SOG2Q08817 791 aa4.04□□□□□ -1.76
VPS29YHR012W GDH1P07262 454 aaKnown RBP4.03□□□□□ -1.76
VPS29YHR012W RPS8AP0CX39 200 aaKnown RBP4.03□□□□□ -1.76
VPS29YHR012W RPS8BP0CX40 200 aaKnown RBP4.03□□□□□ -1.76
VPS29YHR012W PUT3P25502 979 aaPredicted RBP4.03□□□□□ -1.76
VPS29YHR012W PRP21P32524 280 aaPredicted RBP4.03□□□□□ -1.76
VPS29YHR012W PPZ2P33329 710 aa4.03□□□□□ -1.76
VPS29YHR012W RCN1P36054 211 aa4.03□□□□□ -1.76
VPS29YHR012W CCZ1P38273 704 aa4.03□□□□□ -1.76
VPS29YHR012W PSD1P39006 500 aa4.03□□□□□ -1.76
VPS29YHR012W MSS2P40990 351 aa4.03□□□□□ -1.76
VPS29YHR012W ERJ5P43613 295 aaPredicted RBP4.03□□□□□ -1.76
VPS29YHR012W GON7P46984 123 aa4.03□□□□□ -1.76
VPS29YHR012W EFM3P47163 339 aa4.03□□□□□ -1.76
VPS29YHR012W YGL159WP53110 370 aa4.03□□□□□ -1.76
VPS29YHR012W SLD3P53135 668 aa4.03□□□□□ -1.76
VPS29YHR012W PEX30Q06169 523 aa4.03□□□□□ -1.76
VPS29YHR012W MRX9Q07349 420 aaKnown RBP4.03□□□□□ -1.76
VPS29YHR012W YPR071WQ12346 211 aa4.03□□□□□ -1.76
VPS29YHR012W YMR105W-AQ8TGS8 64 aa4.03□□□□□ -1.76
VPS29YHR012W KIN28P06242 306 aa4.02□□□□□ -1.77
VPS29YHR012W RAD52P06778 471 aaKnown RBP4.02□□□□□ -1.77
VPS29YHR012W PHO85P17157 305 aa4.02□□□□□ -1.77
VPS29YHR012W ATP10P18496 279 aa4.02□□□□□ -1.77
VPS29YHR012W VPS17P32913 551 aa4.02□□□□□ -1.77
VPS29YHR012W SOR1P35497 357 aaKnown RBP4.02□□□□□ -1.77
VPS29YHR012W ECM4P36156 370 aa4.02□□□□□ -1.77
VPS29YHR012W ECM31P38122 312 aa4.02□□□□□ -1.77
VPS29YHR012W SHE1P38200 338 aa4.02□□□□□ -1.77
VPS29YHR012W SSH1P38353 490 aaKnown RBP4.02□□□□□ -1.77
VPS29YHR012W AIM10P39965 576 aaKnown RBP4.02□□□□□ -1.77
VPS29YHR012W YGL204CP53089 101 aa4.02□□□□□ -1.77
VPS29YHR012W POP6P53218 158 aa4.02□□□□□ -1.77
VPS29YHR012W COX18P53239 316 aa4.02□□□□□ -1.77
VPS29YHR012W OKP1P53298 406 aa4.02□□□□□ -1.77
VPS29YHR012W NCE103P53615 221 aa4.02□□□□□ -1.77
VPS29YHR012W WSC2P53832 503 aa4.02□□□□□ -1.77
VPS29YHR012W YMR099CQ03161 297 aaKnown RBP4.02□□□□□ -1.77
VPS29YHR012W YMR087WQ04299 284 aa4.02□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms