RNA–Protein interactions for RNA: YDL208W

NHP2, Transcript of Protein related to mammalian high mobility group (HMG) proteins, yeast

Gene NHP2, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHP2	YDL208W	SCM3	Q12334	223 aa		0.74	□□□□□ -2.29
NHP2	YDL208W	YOR012W	Q12351	137 aa		0.74	□□□□□ -2.29
NHP2	YDL208W	YCL012C	Q8J0M4	134 aa		0.74	□□□□□ -2.29
NHP2	YDL208W	TOR1	P35169	2470 aa		0.74	□□□□□ -2.29
NHP2	YDL208W	MEC1	P38111	2368 aa		0.74	□□□□□ -2.29
NHP2	YDL208W	CBP2	P03874	630 aa	Predicted RBP	0.73	□□□□□ -2.29
NHP2	YDL208W	RPL24A	P04449	155 aa	Known RBP	0.73	□□□□□ -2.29
NHP2	YDL208W	RHO1	P06780	209 aa	Known RBP	0.73	□□□□□ -2.29
NHP2	YDL208W	COS2	P0CX12	379 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	COS3	P0CX13	379 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	SNF4	P12904	322 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	GAL3	P13045	520 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	SCL1	P21243	252 aa	Known RBP	0.73	□□□□□ -2.29
NHP2	YDL208W	CPR2	P23285	205 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	TRX3	P25372	127 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	STP22	P25604	385 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	RPC19	P28000	142 aa	Known RBP	0.73	□□□□□ -2.29
NHP2	YDL208W	ITR2	P30606	609 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	SEC17	P32602	292 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	PXA2	P34230	853 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	YPT52	P36018	234 aa	Known RBP	0.73	□□□□□ -2.29
NHP2	YDL208W	PDX3	P38075	228 aa	Known RBP	0.73	□□□□□ -2.29
NHP2	YDL208W	NRG2	P38082	220 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	YBR285W	P38354	144 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	ATG7	P38862	630 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	CYC2	P38909	366 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	MTW1	P39731	289 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	OSW5	P40219	148 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	MPM1	P40364	252 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	AYR1	P40471	297 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	YIL001W	P40560	513 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	PRM10	P42946	383 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	YFR018C	P43599	363 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	PMT4	P46971	762 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	ILM1	P47155	203 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	YPT32	P51996	222 aa	Known RBP	0.73	□□□□□ -2.29
NHP2	YDL208W	NBP35	P52920	328 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	RMR1	P53060	241 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	MPS2	P53159	387 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	GET1	P53192	235 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	COG7	P53195	279 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	EFM5	P53200	248 aa	Known RBP	0.73	□□□□□ -2.29
NHP2	YDL208W	SWC4	P53201	476 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	NOP19	P53317	196 aa	Predicted RBP	0.73	□□□□□ -2.29
NHP2	YDL208W	AQR1	P53943	586 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	YNL033W	P53964	284 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	YNL019C	P53975	284 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	YNL010W	P53981	241 aa	Known RBP	0.73	□□□□□ -2.29
NHP2	YDL208W	SMP3	Q04174	516 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	DYN3	Q04949	312 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	SEC10	Q06245	871 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	GPI11	Q06636	219 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	RPN8	Q08723	338 aa	Known RBP	0.73	□□□□□ -2.29
NHP2	YDL208W	NSL1	Q12143	216 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	IES3	Q12345	250 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	GTT2	Q12390	233 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	PFK27	Q12471	397 aa	Predicted RBP	0.73	□□□□□ -2.29
NHP2	YDL208W	SAS5	Q99314	248 aa		0.73	□□□□□ -2.29
NHP2	YDL208W	RAS2	P01120	322 aa	Known RBP	0.72	□□□□□ -2.29
NHP2	YDL208W	RAD7	P06779	565 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	BCY1	P07278	416 aa	Known RBP	0.72	□□□□□ -2.29
NHP2	YDL208W	GAL7	P08431	366 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	YKR104W	P0CE69	306 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	NMT1	P14743	455 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	PDX1	P16451	410 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	FUR1	P18562	216 aa	Known RBP	0.72	□□□□□ -2.29
NHP2	YDL208W	PHO80	P20052	293 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	CCA1	P21269	546 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	RPL5	P26321	297 aa	Known RBP	0.72	□□□□□ -2.29
NHP2	YDL208W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.72	□□□□□ -2.29	not detected
NHP2	YDL208W	ATP7	P30902	174 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	CAT2	P32796	670 aa	Known RBP	0.72	□□□□□ -2.29
NHP2	YDL208W	MRPL6	P32904	214 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	RPT5	P33297	434 aa	Known RBP	0.72	□□□□□ -2.29
NHP2	YDL208W	LHP1	P33399	275 aa	Known RBP	0.72	□□□□□ -2.29
NHP2	YDL208W	PRP18	P33411	251 aa	Predicted RBP	0.72	□□□□□ -2.29
NHP2	YDL208W	YCR087C-A	P37263	153 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	MAK5	P38112	773 aa	Predicted RBP	0.72	□□□□□ -2.29
NHP2	YDL208W	GOS1	P38736	223 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	LRP1	P38801	184 aa	Known RBP	0.72	□□□□□ -2.29
NHP2	YDL208W	YHR127W	P38833	243 aa	Known RBP	0.72	□□□□□ -2.29
NHP2	YDL208W	MNN9	P39107	395 aa	Known RBP	0.72	□□□□□ -2.29
NHP2	YDL208W	SOP4	P39543	234 aa	Predicted RBP	0.72	□□□□□ -2.29
NHP2	YDL208W	YER034W	P40022	185 aa	Known RBP	0.72	□□□□□ -2.29
NHP2	YDL208W	RGI1	P40043	161 aa	Predicted RBP	0.72	□□□□□ -2.29
NHP2	YDL208W	GVP36	P40531	326 aa	Known RBP	0.72	□□□□□ -2.29
NHP2	YDL208W	APQ12	P40532	138 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	SNL1	P40548	159 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	YRB1	P41920	201 aa	Known RBP	0.72	□□□□□ -2.29
NHP2	YDL208W	FMP32	P43557	207 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	YJR149W	P47177	404 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	GPI8	P49018	411 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	MDM34	P53083	459 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	COS6	P53344	381 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	YNR068C	P53754	272 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	SWS2	P53937	143 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	RHO3	Q00245	231 aa	Known RBP	0.72	□□□□□ -2.29
NHP2	YDL208W	NHP10	Q03435	203 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	TRM82	Q03774	444 aa		0.72	□□□□□ -2.29
NHP2	YDL208W	YMR244W	Q04018	355 aa		0.72	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms