RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 TNNI1P19237 187 aa19.03■□□□□ 0.64
PHGDH-232ENST00000641947 CETN1Q12798 172 aa19.03■□□□□ 0.64
PHGDH-232ENST00000641947 DNTTIP2Q5QJE6 756 aaKnown RBP19.03■□□□□ 0.64
PHGDH-232ENST00000641947 GDF6Q6KF10 455 aaPredicted RBP19.03■□□□□ 0.64
PHGDH-232ENST00000641947 USP37Q86T82 979 aa19.03■□□□□ 0.64
PHGDH-232ENST00000641947 FBXL13Q8NEE6 735 aa19.03■□□□□ 0.64
PHGDH-232ENST00000641947 OLIG1Q8TAK6 271 aa19.03■□□□□ 0.64
PHGDH-232ENST00000641947 WNT8BQ93098 351 aa19.03■□□□□ 0.64
PHGDH-232ENST00000641947 CCDC42Q96M95 316 aa19.03■□□□□ 0.64
PHGDH-232ENST00000641947 FNBP1Q96RU3 617 aa19.03■□□□□ 0.64
PHGDH-232ENST00000641947 PI4K2AQ9BTU6 479 aa19.03■□□□□ 0.64
PHGDH-232ENST00000641947 STK33Q9BYT3 514 aa19.03■□□□□ 0.64
PHGDH-232ENST00000641947 SPC25Q9HBM1 224 aa19.03■□□□□ 0.64
PHGDH-232ENST00000641947 UBE2TQ9NPD8 197 aaPredicted RBP19.03■□□□□ 0.64
PHGDH-232ENST00000641947 LZTFL1Q9NQ48 299 aa19.03■□□□□ 0.64
PHGDH-232ENST00000641947 RAB20Q9NX57 234 aa19.03■□□□□ 0.64
PHGDH-232ENST00000641947 SAGE1Q9NXZ1 904 aa19.03■□□□□ 0.64
PHGDH-232ENST00000641947 GTF2IRD1Q9UHL9 959 aa19.03■□□□□ 0.64
PHGDH-232ENST00000641947 LCA5LO95447 670 aa19.02■□□□□ 0.64
PHGDH-232ENST00000641947 MYCNP04198 464 aaPredicted RBP19.02■□□□□ 0.64
PHGDH-232ENST00000641947 CST5P28325 142 aaPredicted RBP19.02■□□□□ 0.64
PHGDH-232ENST00000641947 CYLC1P35663 651 aaPredicted RBP19.02■□□□□ 0.64
PHGDH-232ENST00000641947 ARHGAP44Q17R89 818 aa19.02■□□□□ 0.64
PHGDH-232ENST00000641947 SLC9C1Q4G0N8 1177 aa19.02■□□□□ 0.64
PHGDH-232ENST00000641947 TDRD12Q587J7 1177 aaKnown RBP19.02■□□□□ 0.64
PHGDH-232ENST00000641947 KREMEN1Q96MU8 473 aa19.02■□□□□ 0.64
PHGDH-232ENST00000641947 IRX2Q9BZI1 471 aaPredicted RBP19.02■□□□□ 0.64
PHGDH-232ENST00000641947 HAUS4Q9H6D7 363 aa19.02■□□□□ 0.64
PHGDH-232ENST00000641947 TRIM10Q9UDY6 481 aa19.02■□□□□ 0.64
PHGDH-232ENST00000641947 DDX20Q9UHI6 824 aaKnown RBP19.02■□□□□ 0.64
PHGDH-232ENST00000641947 SSU72P8A0A1W2PR75 194 aa19.01■□□□□ 0.63
PHGDH-232ENST00000641947 GFPT2O94808 682 aa19.01■□□□□ 0.63
PHGDH-232ENST00000641947 GNRH1P01148 92 aa19.01■□□□□ 0.63
PHGDH-232ENST00000641947 INHAP05111 366 aa19.01■□□□□ 0.63
PHGDH-232ENST00000641947 CXCL8P10145 99 aa19.01■□□□□ 0.63
PHGDH-232ENST00000641947 DARSP14868 501 aaKnown RBP19.01■□□□□ 0.63
PHGDH-232ENST00000641947 HOXA11P31270 313 aaPredicted RBP19.01■□□□□ 0.63
PHGDH-232ENST00000641947 PRKCIP41743 596 aa19.01■□□□□ 0.63
PHGDH-232ENST00000641947 PTK2Q05397 1052 aa19.01■□□□□ 0.63
PHGDH-232ENST00000641947 KLHL30Q0D2K2 578 aa19.01■□□□□ 0.63
PHGDH-232ENST00000641947 ZNF571Q7Z3V5 609 aaPredicted RBP19.01■□□□□ 0.63
PHGDH-232ENST00000641947 HELQQ8TDG4 1101 aa19.01■□□□□ 0.63
PHGDH-232ENST00000641947 A0A1B0GUA9 196 aa19.01■□□□□ 0.63
PHGDH-232ENST00000641947 FOXN3O00409 490 aaPredicted RBP19.01■□□□□ 0.63
PHGDH-232ENST00000641947 EVI5O60447 810 aa19.01■□□□□ 0.63
PHGDH-232ENST00000641947 ERLIN2O94905 339 aa19.01■□□□□ 0.63
PHGDH-232ENST00000641947 HLA-DRAP01903 254 aa19.01■□□□□ 0.63
PHGDH-232ENST00000641947 MCF2P10911 925 aa19.01■□□□□ 0.63
PHGDH-232ENST00000641947 SOX5P35711 763 aa19.01■□□□□ 0.63
PHGDH-232ENST00000641947 GFPT1Q06210 699 aaPredicted RBP19.01■□□□□ 0.63
PHGDH-232ENST00000641947 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.01■□□□□ 0.63
PHGDH-232ENST00000641947 EFCAB13Q8IY85 973 aa19.01■□□□□ 0.63
PHGDH-232ENST00000641947 TMEM130Q8N3G9 435 aa19.01■□□□□ 0.63
PHGDH-232ENST00000641947 TATDN2Q93075 761 aa19.01■□□□□ 0.63
PHGDH-232ENST00000641947 GCOM2Q9BZD3 368 aaPredicted RBP19.01■□□□□ 0.63
PHGDH-232ENST00000641947 RFX1P22670 979 aa19■□□□□ 0.63
PHGDH-232ENST00000641947 STAT1P42224 750 aa19■□□□□ 0.63
PHGDH-232ENST00000641947 SNX17Q15036 470 aa19■□□□□ 0.63
PHGDH-232ENST00000641947 FAM212AQ96EL1 285 aa19■□□□□ 0.63
PHGDH-232ENST00000641947 PTCH2Q9Y6C5 1203 aa19■□□□□ 0.63
PHGDH-232ENST00000641947 MYH10P35580 1976 aa19■□□□□ 0.63
PHGDH-232ENST00000641947 STAG3L1P0CL83 205 aa18.99■□□□□ 0.63
PHGDH-232ENST00000641947 GNAT1P11488 350 aa18.99■□□□□ 0.63
PHGDH-232ENST00000641947 HSP90AA2PQ14568 343 aaPredicted RBP18.99■□□□□ 0.63
PHGDH-232ENST00000641947 SPOPLQ6IQ16 392 aa18.99■□□□□ 0.63
PHGDH-232ENST00000641947 WDR49Q8IV35 697 aa18.99■□□□□ 0.63
PHGDH-232ENST00000641947 PPM1KQ8N3J5 372 aa18.99■□□□□ 0.63
PHGDH-232ENST00000641947 MTMR12Q9C0I1 747 aa18.99■□□□□ 0.63
PHGDH-232ENST00000641947 LACRTQ9GZZ8 138 aa18.99■□□□□ 0.63
PHGDH-232ENST00000641947 DEF6Q9H4E7 631 aa18.99■□□□□ 0.63
PHGDH-232ENST00000641947 DAAM1Q9Y4D1 1078 aa18.99■□□□□ 0.63
PHGDH-232ENST00000641947 A0A087X0T9 212 aa18.98■□□□□ 0.63
PHGDH-232ENST00000641947 GOLGA6L9A6NEM1 432 aa18.98■□□□□ 0.63
PHGDH-232ENST00000641947 AKR1B10O60218 316 aa18.98■□□□□ 0.63
PHGDH-232ENST00000641947 FAM228BP0C875 321 aa18.98■□□□□ 0.63
PHGDH-232ENST00000641947 EIF4BP23588 611 aaKnown RBP18.98■□□□□ 0.63
PHGDH-232ENST00000641947 CDC42EP1Q00587 391 aa18.98■□□□□ 0.63
PHGDH-232ENST00000641947 BIRC3Q13489 604 aa18.98■□□□□ 0.63
PHGDH-232ENST00000641947 LHX8Q68G74 356 aa18.98■□□□□ 0.63
PHGDH-232ENST00000641947 SYT10Q6XYQ8 523 aa18.98■□□□□ 0.63
PHGDH-232ENST00000641947 CATSPER4Q7RTX7 472 aa18.98■□□□□ 0.63
PHGDH-232ENST00000641947 SYT11Q9BT88 431 aa18.98■□□□□ 0.63
PHGDH-232ENST00000641947 APOBEC3GQ9HC16 384 aaKnown RBP18.98■□□□□ 0.63
PHGDH-232ENST00000641947 FERP16591 822 aa18.98■□□□□ 0.63
PHGDH-232ENST00000641947 PIK3CAP42336 1068 aa18.98■□□□□ 0.63
PHGDH-232ENST00000641947 ETF1P62495 437 aaKnown RBP18.98■□□□□ 0.63
PHGDH-232ENST00000641947 FAM47CQ5HY64 1035 aa18.98■□□□□ 0.63
PHGDH-232ENST00000641947 SLAIN1Q8ND83 568 aa18.98■□□□□ 0.63
PHGDH-232ENST00000641947 DHX38Q92620 1227 aaKnown RBP18.98■□□□□ 0.63
PHGDH-232ENST00000641947 NT5C1BQ96P26 610 aa18.98■□□□□ 0.63
PHGDH-232ENST00000641947 WDR24Q96S15 920 aa18.98■□□□□ 0.63
PHGDH-232ENST00000641947 ARID3AQ99856 593 aa18.98■□□□□ 0.63
PHGDH-232ENST00000641947 EIF2AQ9BY44 585 aaKnown RBP18.98■□□□□ 0.63
PHGDH-232ENST00000641947 CXCL16Q9H2A7 254 aa18.98■□□□□ 0.63
PHGDH-232ENST00000641947 UMODL1Q5DID0 1318 aa18.97■□□□□ 0.63
PHGDH-232ENST00000641947 GRK4P32298 578 aa18.97■□□□□ 0.63
PHGDH-232ENST00000641947 KRT83P78385 493 aa18.97■□□□□ 0.63
PHGDH-232ENST00000641947 TAF2Q6P1X5 1199 aa18.97■□□□□ 0.63
PHGDH-232ENST00000641947 SERINC5Q86VE9 423 aa18.97■□□□□ 0.63
PHGDH-232ENST00000641947 SESTD1Q86VW0 696 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms