RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 SCP2P22307 547 aa18.93■□□□□ 0.62
PHGDH-227ENST00000641811 CASP5P51878 434 aa18.93■□□□□ 0.62
PHGDH-227ENST00000641811 KCNA1Q09470 495 aa18.93■□□□□ 0.62
PHGDH-227ENST00000641811 CLUL1Q15846 466 aa18.93■□□□□ 0.62
PHGDH-227ENST00000641811 ZBTB41Q5SVQ8 909 aa18.93■□□□□ 0.62
PHGDH-227ENST00000641811 ALKAL1Q6UXT8 129 aa18.93■□□□□ 0.62
PHGDH-227ENST00000641811 GRAMD1CQ8IYS0 662 aa18.93■□□□□ 0.62
PHGDH-227ENST00000641811 VN1R2Q8NFZ6 395 aa18.93■□□□□ 0.62
PHGDH-227ENST00000641811 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-227ENST00000641811 HPS3Q969F9 1004 aa18.93■□□□□ 0.62
PHGDH-227ENST00000641811 SNX27Q96L92 541 aa18.93■□□□□ 0.62
PHGDH-227ENST00000641811 ZMAT2Q96NC0 199 aaKnown RBP18.93■□□□□ 0.62
PHGDH-227ENST00000641811 PPP1R10Q96QC0 940 aaKnown RBP18.93■□□□□ 0.62
PHGDH-227ENST00000641811 COLEC11Q9BWP8 271 aa18.93■□□□□ 0.62
PHGDH-227ENST00000641811 STRA6Q9BX79 667 aa18.93■□□□□ 0.62
PHGDH-227ENST00000641811 COL25A1Q9BXS0 654 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-227ENST00000641811 TRIM9Q9C026 710 aa18.93■□□□□ 0.62
PHGDH-227ENST00000641811 TOPORSQ9NS56 1045 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-227ENST00000641811 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.92■□□□□ 0.62
PHGDH-227ENST00000641811 PPP1R37O75864 691 aa18.92■□□□□ 0.62
PHGDH-227ENST00000641811 MYBP10242 640 aa18.92■□□□□ 0.62
PHGDH-227ENST00000641811 CTSAP10619 480 aa18.92■□□□□ 0.62
PHGDH-227ENST00000641811 PFKFB1P16118 471 aa18.92■□□□□ 0.62
PHGDH-227ENST00000641811 CMA1P23946 247 aa18.92■□□□□ 0.62
PHGDH-227ENST00000641811 IGFBP6P24592 240 aaPredicted RBP18.92■□□□□ 0.62
PHGDH-227ENST00000641811 TNFSF9P41273 254 aa18.92■□□□□ 0.62
PHGDH-227ENST00000641811 HSP90AA2PQ14568 343 aaPredicted RBP18.92■□□□□ 0.62
PHGDH-227ENST00000641811 SLC10A6Q3KNW5 377 aa18.92■□□□□ 0.62
PHGDH-227ENST00000641811 LEXMQ3ZCV2 418 aa18.92■□□□□ 0.62
PHGDH-227ENST00000641811 XKR4Q5GH76 650 aa18.92■□□□□ 0.62
PHGDH-227ENST00000641811 ADALQ6DHV7 355 aa18.92■□□□□ 0.62
PHGDH-227ENST00000641811 LLGL2Q6P1M3 1020 aa18.92■□□□□ 0.62
PHGDH-227ENST00000641811 CCDC65Q8IXS2 484 aa18.92■□□□□ 0.62
PHGDH-227ENST00000641811 HASPINQ8TF76 798 aa18.92■□□□□ 0.62
PHGDH-227ENST00000641811 GPR62Q9BZJ7 368 aa18.92■□□□□ 0.62
PHGDH-227ENST00000641811 LRRC27Q9C0I9 530 aa18.92■□□□□ 0.62
PHGDH-227ENST00000641811 SCAND2PQ9GZW5 306 aaPredicted RBP18.92■□□□□ 0.62
PHGDH-227ENST00000641811 GOLGA2P5Q9HBQ8 144 aa18.92■□□□□ 0.62
PHGDH-227ENST00000641811 SERTAD1Q9UHV2 236 aa18.92■□□□□ 0.62
PHGDH-227ENST00000641811 BARX2Q9UMQ3 279 aaPredicted RBP18.92■□□□□ 0.62
PHGDH-227ENST00000641811 A0A0B4J269 797 aa18.91■□□□□ 0.62
PHGDH-227ENST00000641811 GCNT3O95395 438 aa18.91■□□□□ 0.62
PHGDH-227ENST00000641811 EFEMP2O95967 443 aa18.91■□□□□ 0.62
PHGDH-227ENST00000641811 AFMP43652 599 aa18.91■□□□□ 0.62
PHGDH-227ENST00000641811 NDUFV1P49821 464 aa18.91■□□□□ 0.62
PHGDH-227ENST00000641811 ASIC1P78348 528 aa18.91■□□□□ 0.62
PHGDH-227ENST00000641811 NUCB2P80303 420 aa18.91■□□□□ 0.62
PHGDH-227ENST00000641811 AMPD3Q01432 767 aa18.91■□□□□ 0.62
PHGDH-227ENST00000641811 SOX4Q06945 474 aaPredicted RBP18.91■□□□□ 0.62
PHGDH-227ENST00000641811 COASYQ13057 564 aa18.91■□□□□ 0.62
PHGDH-227ENST00000641811 PTPN14Q15678 1187 aa18.91■□□□□ 0.62
PHGDH-227ENST00000641811 GLIS3Q8NEA6 775 aa18.91■□□□□ 0.62
PHGDH-227ENST00000641811 B3GALT6Q96L58 329 aa18.91■□□□□ 0.62
PHGDH-227ENST00000641811 C7orf25Q9BPX7 421 aa18.91■□□□□ 0.62
PHGDH-227ENST00000641811 BLZF1Q9H2G9 400 aa18.91■□□□□ 0.62
PHGDH-227ENST00000641811 OLFML3Q9NRN5 406 aa18.91■□□□□ 0.62
PHGDH-227ENST00000641811 CLEC1BQ9P126 229 aa18.91■□□□□ 0.62
PHGDH-227ENST00000641811 ADAM28Q9UKQ2 775 aa18.91■□□□□ 0.62
PHGDH-227ENST00000641811 TCHHQ07283 1943 aa18.91■□□□□ 0.62
PHGDH-227ENST00000641811 TRIP11Q15643 1979 aa18.9■□□□□ 0.62
PHGDH-227ENST00000641811 C2CD2LO14523 706 aa18.9■□□□□ 0.62
PHGDH-227ENST00000641811 FAM189A1O60320 539 aa18.9■□□□□ 0.62
PHGDH-227ENST00000641811 CLASP2O75122 1294 aaKnown RBP18.9■□□□□ 0.62
PHGDH-227ENST00000641811 TADA2AO75478 443 aa18.9■□□□□ 0.62
PHGDH-227ENST00000641811 KIF4AO95239 1232 aa18.9■□□□□ 0.62
PHGDH-227ENST00000641811 SOD2P04179 222 aa18.9■□□□□ 0.62
PHGDH-227ENST00000641811 CLTAP09496 248 aa18.9■□□□□ 0.62
PHGDH-227ENST00000641811 CXCL8P10145 99 aa18.9■□□□□ 0.62
PHGDH-227ENST00000641811 ABCD1P33897 745 aa18.9■□□□□ 0.62
PHGDH-227ENST00000641811 BMS1Q14692 1282 aaKnown RBP18.9■□□□□ 0.62
PHGDH-227ENST00000641811 L1TD1Q5T7N2 865 aaKnown RBP18.9■□□□□ 0.62
PHGDH-227ENST00000641811 FUT10Q6P4F1 479 aa18.9■□□□□ 0.62
PHGDH-227ENST00000641811 RNF168Q8IYW5 571 aaPredicted RBP18.9■□□□□ 0.62
PHGDH-227ENST00000641811 TMEM130Q8N3G9 435 aa18.9■□□□□ 0.62
PHGDH-227ENST00000641811 ADAMTS19Q8TE59 1207 aa18.9■□□□□ 0.62
PHGDH-227ENST00000641811 C18orf25Q96B23 403 aaPredicted RBP18.9■□□□□ 0.62
PHGDH-227ENST00000641811 HVCN1Q96D96 273 aa18.9■□□□□ 0.62
PHGDH-227ENST00000641811 NECAB3Q96P71 396 aaPredicted RBP18.9■□□□□ 0.62
PHGDH-227ENST00000641811 CDCA3Q99618 268 aaPredicted RBP18.9■□□□□ 0.62
PHGDH-227ENST00000641811 MSTO1Q9BUK6 570 aa18.9■□□□□ 0.62
PHGDH-227ENST00000641811 HERC2P3Q9BVR0 1158 aa18.9■□□□□ 0.62
PHGDH-227ENST00000641811 MAGEF1Q9HAY2 307 aa18.9■□□□□ 0.62
PHGDH-227ENST00000641811 CNTN3Q9P232 1028 aa18.9■□□□□ 0.62
PHGDH-227ENST00000641811 HPSEQ9Y251 543 aa18.9■□□□□ 0.62
PHGDH-227ENST00000641811 TCF20Q9UGU0 1960 aaKnown RBP18.9■□□□□ 0.62
PHGDH-227ENST00000641811 DLL1O00548 723 aa18.89■□□□□ 0.61
PHGDH-227ENST00000641811 OGTO15294 1046 aa18.89■□□□□ 0.61
PHGDH-227ENST00000641811 ACTN4O43707 911 aaKnown RBP18.89■□□□□ 0.61
PHGDH-227ENST00000641811 LILRB3O75022 631 aa18.89■□□□□ 0.61
PHGDH-227ENST00000641811 PRPF6O94906 941 aaKnown RBP18.89■□□□□ 0.61
PHGDH-227ENST00000641811 SLFN14P0C7P3 912 aa18.89■□□□□ 0.61
PHGDH-227ENST00000641811 KCNE1P15382 129 aa18.89■□□□□ 0.61
PHGDH-227ENST00000641811 CLCNKBP51801 687 aa18.89■□□□□ 0.61
PHGDH-227ENST00000641811 SPAG1Q07617 926 aa18.89■□□□□ 0.61
PHGDH-227ENST00000641811 CUL4BQ13620 913 aa18.89■□□□□ 0.61
PHGDH-227ENST00000641811 KCNC3Q14003 757 aa18.89■□□□□ 0.61
PHGDH-227ENST00000641811 PTCRAQ6ISU1 281 aaPredicted RBP18.89■□□□□ 0.61
PHGDH-227ENST00000641811 CNNM4Q6P4Q7 775 aa18.89■□□□□ 0.61
PHGDH-227ENST00000641811 CEP57L1Q8IYX8 460 aa18.89■□□□□ 0.61
PHGDH-227ENST00000641811 MSLNLQ96KJ4 702 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms