RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 ERVK-9P63128 1117 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 FAM193AP78312 1265 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 GCNT1Q02742 428 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 MKRN4PQ13434 485 aaPredicted RBP19.21■□□□□ 0.67
PHGDH-226ENST00000641756 DHX37Q8IY37 1157 aaKnown RBP19.21■□□□□ 0.67
PHGDH-226ENST00000641756 CASKIN2Q8WXE0 1202 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 BBXQ8WY36 941 aaPredicted RBP19.21■□□□□ 0.67
PHGDH-226ENST00000641756 DDX1Q92499 740 aaKnown RBP19.21■□□□□ 0.67
PHGDH-226ENST00000641756 KCNN1Q92952 543 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 FAM167AQ96KS9 214 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 DDX47Q9H0S4 455 aaKnown RBP19.21■□□□□ 0.67
PHGDH-226ENST00000641756 EFCC1Q9HA90 598 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 PDGFCQ9NRA1 345 aa19.21■□□□□ 0.67
PHGDH-226ENST00000641756 KIAA0391O15091 583 aaKnown RBP19.2■□□□□ 0.66
PHGDH-226ENST00000641756 VNN1O95497 513 aa19.2■□□□□ 0.66
PHGDH-226ENST00000641756 COPB2P35606 906 aa19.2■□□□□ 0.66
PHGDH-226ENST00000641756 WDR44Q5JSH3 913 aa19.2■□□□□ 0.66
PHGDH-226ENST00000641756 ZBTB33Q86T24 672 aa19.2■□□□□ 0.66
PHGDH-226ENST00000641756 TRAPPC12Q8WVT3 735 aa19.2■□□□□ 0.66
PHGDH-226ENST00000641756 RIN2Q8WYP3 895 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-226ENST00000641756 ZNF668Q96K58 619 aaPredicted RBP19.2■□□□□ 0.66
PHGDH-226ENST00000641756 ADGRA2Q96PE1 1338 aa19.2■□□□□ 0.66
PHGDH-226ENST00000641756 ZBTB42B2RXF5 422 aa19.19■□□□□ 0.66
PHGDH-226ENST00000641756 ZC3H11AO75152 810 aaKnown RBP eCLIP19.19■□□□□ 0.66
PHGDH-226ENST00000641756 CLSTN1O94985 981 aa19.19■□□□□ 0.66
PHGDH-226ENST00000641756 SYF2O95926 243 aaKnown RBP19.19■□□□□ 0.66
PHGDH-226ENST00000641756 LDHAP00338 332 aaKnown RBP19.19■□□□□ 0.66
PHGDH-226ENST00000641756 FGGP02679 453 aa19.19■□□□□ 0.66
PHGDH-226ENST00000641756 HADHBP55084 474 aaKnown RBP19.19■□□□□ 0.66
PHGDH-226ENST00000641756 ZNF211Q13398 564 aaPredicted RBP19.19■□□□□ 0.66
PHGDH-226ENST00000641756 MESDQ14696 234 aa19.19■□□□□ 0.66
PHGDH-226ENST00000641756 PLCB4Q15147 1175 aa19.19■□□□□ 0.66
PHGDH-226ENST00000641756 KCNV1Q6PIU1 500 aa19.19■□□□□ 0.66
PHGDH-226ENST00000641756 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.19■□□□□ 0.66
PHGDH-226ENST00000641756 FAM71BQ8TC56 605 aa19.19■□□□□ 0.66
PHGDH-226ENST00000641756 ZNF653Q96CK0 615 aa19.19■□□□□ 0.66
PHGDH-226ENST00000641756 BTBD6Q96KE9 485 aa19.19■□□□□ 0.66
PHGDH-226ENST00000641756 ZNF408Q9H9D4 720 aa19.19■□□□□ 0.66
PHGDH-226ENST00000641756 LGR5O75473 907 aa19.19■□□□□ 0.66
PHGDH-226ENST00000641756 TXNP10599 105 aaKnown RBP19.19■□□□□ 0.66
PHGDH-226ENST00000641756 SCP2P22307 547 aa19.19■□□□□ 0.66
PHGDH-226ENST00000641756 GGCXP38435 758 aa19.19■□□□□ 0.66
PHGDH-226ENST00000641756 AARSP49588 968 aaKnown RBP eCLIP19.19■□□□□ 0.66
PHGDH-226ENST00000641756 LAMTOR4Q0VGL1 99 aa19.19■□□□□ 0.66
PHGDH-226ENST00000641756 NAA35Q5VZE5 725 aa19.19■□□□□ 0.66
PHGDH-226ENST00000641756 ATP8B4Q8TF62 1192 aa19.19■□□□□ 0.66
PHGDH-226ENST00000641756 ZBTB10Q96DT7 871 aa19.19■□□□□ 0.66
PHGDH-226ENST00000641756 CALR3Q96L12 384 aaKnown RBP19.19■□□□□ 0.66
PHGDH-226ENST00000641756 MROH8Q9H579 483 aa19.19■□□□□ 0.66
PHGDH-226ENST00000641756 GRIN3BO60391 1043 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 FAM153BP0C7A2 387 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 TNFSF9P41273 254 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 SNAPC2Q13487 334 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 FAM153CQ494X1 144 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 IER5Q5VY09 327 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 SCARA3Q6AZY7 606 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 C11orf63Q6NUN7 778 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 CCDC62Q6P9F0 684 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 EMBQ6PCB8 327 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 ENOSF1Q7L5Y1 443 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 RNF149Q8NC42 400 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 TSEN2Q8NCE0 465 aaKnown RBP19.18■□□□□ 0.66
PHGDH-226ENST00000641756 OR5B17Q8NGF7 314 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 ALG3Q92685 438 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 CGRRF1Q99675 332 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 NUP85Q9BW27 656 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 APOBEC3GQ9HC16 384 aaKnown RBP19.18■□□□□ 0.66
PHGDH-226ENST00000641756 FAM153AQ9UHL3 310 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 CNTNAP2Q9UHC6 1331 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 AGPSO00116 658 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 CLDN3O15551 220 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 SART1O43290 800 aaKnown RBP19.18■□□□□ 0.66
PHGDH-226ENST00000641756 MARCKSL1P49006 195 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 TCEAL1Q15170 157 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 AADACL2Q6P093 401 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 ADAT2Q7Z6V5 191 aaKnown RBP19.18■□□□□ 0.66
PHGDH-226ENST00000641756 CPNE8Q86YQ8 564 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 ZNF564Q8TBZ8 553 aaPredicted RBP19.18■□□□□ 0.66
PHGDH-226ENST00000641756 KRT35Q92764 455 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 SLC10A4Q96EP9 437 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 RNPC3Q96LT9 517 aaKnown RBP19.18■□□□□ 0.66
PHGDH-226ENST00000641756 TCHPQ9BT92 498 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 MED4Q9NPJ6 270 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 ADAM21Q9UKJ8 722 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 TRPC6Q9Y210 931 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 NR2E1Q9Y466 385 aa19.18■□□□□ 0.66
PHGDH-226ENST00000641756 MSCO60682 206 aa19.17■□□□□ 0.66
PHGDH-226ENST00000641756 GJB1P08034 283 aa19.17■□□□□ 0.66
PHGDH-226ENST00000641756 COMTP21964 271 aa19.17■□□□□ 0.66
PHGDH-226ENST00000641756 MKRN3Q13064 507 aaKnown RBP19.17■□□□□ 0.66
PHGDH-226ENST00000641756 PAK2Q13177 524 aa19.17■□□□□ 0.66
PHGDH-226ENST00000641756 LDLRAD1Q5T700 205 aa19.17■□□□□ 0.66
PHGDH-226ENST00000641756 PLPPR4Q7Z2D5 763 aa19.17■□□□□ 0.66
PHGDH-226ENST00000641756 RHPN2Q8IUC4 686 aa19.17■□□□□ 0.66
PHGDH-226ENST00000641756 CCDC113Q9H0I3 377 aa19.17■□□□□ 0.66
PHGDH-226ENST00000641756 TAF1DQ9H5J8 278 aaPredicted RBP19.17■□□□□ 0.66
PHGDH-226ENST00000641756 CCDC188H7C350 402 aa19.16■□□□□ 0.66
PHGDH-226ENST00000641756 CYP1A2P05177 515 aa19.16■□□□□ 0.66
PHGDH-226ENST00000641756 GUCY2FP51841 1108 aa19.16■□□□□ 0.66
PHGDH-226ENST00000641756 CLEC16AQ2KHT3 1053 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms