RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 CFAP157Q5JU67 520 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 KAZNQ674X7 775 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 DNAJC1Q96KC8 554 aaKnown RBP14.66□□□□□ -0.06
SCARB2-227ENST00000640957 NINJ2Q9NZG7 142 aa14.66□□□□□ -0.06
SCARB2-227ENST00000640957 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.66□□□□□ -0.06
SCARB2-227ENST00000640957 SERPINB2P05120 415 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 AKR1B1P15121 316 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 CDR2Q01850 454 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 GIT2Q14161 759 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 TMEM63BQ5T3F8 832 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 ARHGEF18Q6ZSZ5 1173 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 VPS52Q8N1B4 723 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 RFWD2Q8NHY2 731 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 SHKBP1Q8TBC3 707 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 ZSWIM1Q9BR11 485 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 ANAPC5Q9UJX4 755 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 ADAMTS7Q9UKP4 1686 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 SGPL1O95470 568 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 TMEM253P0C7T8 217 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 CCNB1P14635 433 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 GCLMP48507 274 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 IL9RQ01113 521 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 THOC5Q13769 683 aaKnown RBP14.65□□□□□ -0.06
SCARB2-227ENST00000640957 SHROOM1Q2M3G4 852 aaPredicted RBP14.65□□□□□ -0.06
SCARB2-227ENST00000640957 OR52E8Q6IFG1 317 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 GSTA5Q7RTV2 222 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 TRIM74Q86UV6 250 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 TRIM73Q86UV7 250 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 SLC13A5Q86YT5 568 aaPredicted RBP14.65□□□□□ -0.06
SCARB2-227ENST00000640957 ART4Q93070 314 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 MCUR1Q96AQ8 359 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 ZC3H12CQ9C0D7 883 aaKnown RBP14.65□□□□□ -0.06
SCARB2-227ENST00000640957 VCXQ9H320 206 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 C10orf88Q9H8K7 445 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 ARL8BQ9NVJ2 186 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 PCDHA3Q9Y5H8 950 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 PITPNM2Q9BZ72 1349 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 MAPK13O15264 365 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 TP73O15350 636 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 ETS1P14921 441 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 ZNF76P36508 570 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 GALNT17Q6IS24 598 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 ANKMY2Q8IV38 441 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 RBBP8NLQ8NC74 664 aaPredicted RBP14.65□□□□□ -0.06
SCARB2-227ENST00000640957 CADM1Q9BY67 442 aaKnown RBP14.65□□□□□ -0.06
SCARB2-227ENST00000640957 CCDC134Q9H6E4 229 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 VPS37BQ9H9H4 285 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 PKD2L1Q9P0L9 805 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 USTQ9Y2C2 406 aa14.65□□□□□ -0.06
SCARB2-227ENST00000640957 ASTN1O14525 1302 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 TTC4O95801 387 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 LMNB1P20700 586 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 AMPD1P23109 780 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 RRM1P23921 792 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 RASSF2P50749 326 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 JAM2P57087 298 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 NOP14P78316 857 aaKnown RBP14.64□□□□□ -0.07
SCARB2-227ENST00000640957 MCL1Q07820 350 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 ZYXQ15942 572 aaKnown RBP14.64□□□□□ -0.07
SCARB2-227ENST00000640957 COBLL1Q53SF7 1204 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 OLIG1Q8TAK6 271 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 RBM41Q96IZ5 413 aaKnown RBP14.64□□□□□ -0.07
SCARB2-227ENST00000640957 ZNF333Q96JL9 665 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 PHF12Q96QT6 1004 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 CNOT7Q9UIV1 285 aaKnown RBP14.64□□□□□ -0.07
SCARB2-227ENST00000640957 MTUS1Q9ULD2 1270 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 SLIT2O94813 1529 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 KAT6AQ92794 2004 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 EXOC1LA0A1B0GW35 172 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 BTNL10A8MVZ5 291 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 PRKCIP41743 596 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 STRN3Q13033 797 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 GRAPQ13588 217 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 HS2ST1Q7LGA3 356 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 NLRP9Q7RTR0 991 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 CCDC125Q86Z20 511 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 ARHGEF19Q8IW93 802 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 TEX9Q8N6V9 391 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 PDCD7Q8N8D1 485 aaKnown RBP14.64□□□□□ -0.07
SCARB2-227ENST00000640957 GRAPLQ8TC17 118 aaPredicted RBP14.64□□□□□ -0.07
SCARB2-227ENST00000640957 PCDHB18PQ96TA0 734 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 NUP85Q9BW27 656 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 PSTPIP2Q9H939 334 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 NUP188Q5SRE5 1749 aa14.64□□□□□ -0.07
SCARB2-227ENST00000640957 A6NJR5 290 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 PODXLO00592 558 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 TBCAO75347 108 aaKnown RBP14.63□□□□□ -0.07
SCARB2-227ENST00000640957 PRR5LQ6MZQ0 368 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 TPH2Q8IWU9 490 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 GLIS1Q8NBF1 620 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 FBXO27Q8NI29 283 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 MAIP1Q8WWC4 291 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 NMD3Q96D46 503 aaKnown RBP14.63□□□□□ -0.07
SCARB2-227ENST00000640957 MAGEB18Q96M61 343 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 PREBQ9HCU5 417 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 SAYSD1Q9NPB0 183 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 PCDHAC2Q9Y5I4 1007 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 GOLGA8IPA6NC78 632 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 GOLGA8JA6NMD2 632 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 CYP26A1O43174 497 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms