RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 RBM43Q6ZSC3 357 aaKnown RBP14.37□□□□□ -0.11
GTF3A-209ENST00000640289 CBWD2Q8IUF1 395 aa14.37□□□□□ -0.11
GTF3A-209ENST00000640289 C12orf56Q8IXR9 622 aa14.37□□□□□ -0.11
GTF3A-209ENST00000640289 TMEM130Q8N3G9 435 aa14.37□□□□□ -0.11
GTF3A-209ENST00000640289 RDH13Q8NBN7 331 aa14.37□□□□□ -0.11
GTF3A-209ENST00000640289 CLP1Q92989 425 aaKnown RBP14.37□□□□□ -0.11
GTF3A-209ENST00000640289 FAM212AQ96EL1 285 aa14.37□□□□□ -0.11
GTF3A-209ENST00000640289 TGS1Q96RS0 853 aaKnown RBP14.37□□□□□ -0.11
GTF3A-209ENST00000640289 GTPBP4Q9BZE4 634 aaKnown RBP14.37□□□□□ -0.11
GTF3A-209ENST00000640289 ZNF576Q9H609 170 aa14.37□□□□□ -0.11
GTF3A-209ENST00000640289 CNTN3Q9P232 1028 aa14.37□□□□□ -0.11
GTF3A-209ENST00000640289 CGNQ9P2M7 1197 aaKnown RBP14.37□□□□□ -0.11
GTF3A-209ENST00000640289 KANSL3Q9P2N6 904 aa14.37□□□□□ -0.11
GTF3A-209ENST00000640289 CACNG4Q9UBN1 327 aa14.37□□□□□ -0.11
GTF3A-209ENST00000640289 GBF1Q92538 1859 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 EPOPA6NHQ4 379 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 NT5C1B-RDH14C9J2C7 533 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 TULP1O00294 542 aaPredicted RBP14.36□□□□□ -0.11
GTF3A-209ENST00000640289 KIAA0391O15091 583 aaKnown RBP14.36□□□□□ -0.11
GTF3A-209ENST00000640289 NR3C1P04150 777 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 THP07101 528 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 ADRB2P07550 413 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 PTMSP20962 102 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 CTNNB1P35222 781 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 BMPR1AP36894 532 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 ERVK-21P61565 698 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 PPP2R3AQ06190 1150 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 DSC1Q08554 894 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 NFKBIBQ15653 356 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 NAB2Q15742 525 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 CENPPQ6IPU0 288 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 BRSK2Q8IWQ3 736 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 COLGALT2Q8IYK4 626 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 XXYLT1Q8NBI6 393 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 COLGALT1Q8NBJ5 622 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 GOLGA5Q8TBA6 731 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 RSPH1Q8WYR4 309 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 FBXL18Q96ME1 805 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 FAM161BQ96MY7 647 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 FAM193BQ96PV7 902 aaPredicted RBP14.36□□□□□ -0.11
GTF3A-209ENST00000640289 PPP1R10Q96QC0 940 aaKnown RBP14.36□□□□□ -0.11
GTF3A-209ENST00000640289 GOLGA2P5Q9HBQ8 144 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 DMAC2Q9NW81 257 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 CTNND2Q9UQB3 1225 aa14.36□□□□□ -0.11
GTF3A-209ENST00000640289 FNDC1Q4ZHG4 1894 aaPredicted RBP14.35□□□□□ -0.11
GTF3A-209ENST00000640289 CASTOR2A6NHX0 329 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 EXOC3O60645 756 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 KCNE1P15382 129 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 LAG3P18627 525 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 NR2F2P24468 414 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 CCNE1P24864 410 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 SLC11A1P49279 550 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 CASP4P49662 377 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 BCAR1P56945 870 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 STX17P56962 302 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 SOX4Q06945 474 aaPredicted RBP14.35□□□□□ -0.11
GTF3A-209ENST00000640289 STIM1Q13586 685 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 EPC2Q52LR7 807 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 ZNF697Q5TEC3 545 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 ANKRD40Q6AI12 368 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 JADE1Q6IE81 842 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 KCNT2Q6UVM3 1135 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 Q7L0L9 218 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 NELFBQ8WX92 580 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 ARNTL2Q8WYA1 636 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 RABGGTAQ92696 567 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 P2RX5Q93086 422 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 C18orf25Q96B23 403 aaPredicted RBP14.35□□□□□ -0.11
GTF3A-209ENST00000640289 KIF12Q96FN5 646 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 EEF2KMTQ96G04 330 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 FAM84AQ96KN4 292 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 PAAF1Q9BRP4 392 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 PLEKHA5Q9HAU0 1116 aa14.35□□□□□ -0.11
GTF3A-209ENST00000640289 RBAKQ9NYW8 714 aaPredicted RBP14.35□□□□□ -0.11
GTF3A-209ENST00000640289 TMEM265A0A087WTH1 108 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 ZNF233A6NK53 670 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 F8W810 466 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 RFXAPO00287 272 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 PSMA7O14818 248 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 GALTP07902 379 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 NFICP08651 508 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 OR1G1P47890 313 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 NLRP12P59046 1061 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 ADAM9Q13443 819 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 TUSC3Q13454 348 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 SNRNP35Q16560 246 aaKnown RBP14.34□□□□□ -0.11
GTF3A-209ENST00000640289 NFIL3Q16649 462 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 EDRF1Q3B7T1 1238 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 DPCR1Q3MIW9 517 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 TMEM173Q86WV6 379 aaPredicted RBP14.34□□□□□ -0.11
GTF3A-209ENST00000640289 SLC9A9Q8IVB4 645 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 FBXO22Q8NEZ5 403 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 DHTKD1Q96HY7 919 aaPredicted RBP14.34□□□□□ -0.11
GTF3A-209ENST00000640289 ZNF558Q96NG5 402 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 TSG101Q99816 390 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 PDE11AQ9HCR9 933 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 TUBGCP4Q9UGJ1 667 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 PRG3Q9Y2Y8 225 aaPredicted RBP14.34□□□□□ -0.11
GTF3A-209ENST00000640289 TRIOBPQ9H2D6 2365 aa14.34□□□□□ -0.11
GTF3A-209ENST00000640289 LAMA3Q16787 3333 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms