RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-231ENST00000639599 DNM3Q9UQ16 869 aa16.16■□□□□ 0.18
TARDBP-231ENST00000639599 N4BP1O75113 896 aaKnown RBP16.15■□□□□ 0.18
TARDBP-231ENST00000639599 EFEMP2O95967 443 aa16.15■□□□□ 0.18
TARDBP-231ENST00000639599 LAMP2P13473 410 aa16.15■□□□□ 0.18
TARDBP-231ENST00000639599 NBL1P41271 181 aa16.15■□□□□ 0.18
TARDBP-231ENST00000639599 FXR2P51116 673 aaKnown RBP eCLIP16.15■□□□□ 0.182e-7■■□□□ 11.5
TARDBP-231ENST00000639599 ANGPT1Q15389 498 aa16.15■□□□□ 0.18
TARDBP-231ENST00000639599 GLRA4Q5JXX5 417 aa16.15■□□□□ 0.18
TARDBP-231ENST00000639599 GRASPQ7Z6J2 395 aaPredicted RBP16.15■□□□□ 0.18
TARDBP-231ENST00000639599 SLC44A3Q8N4M1 653 aa16.15■□□□□ 0.18
TARDBP-231ENST00000639599 DTWD2Q8NBA8 298 aa16.15■□□□□ 0.18
TARDBP-231ENST00000639599 FBXO18Q8NFZ0 1043 aa16.15■□□□□ 0.18
TARDBP-231ENST00000639599 KCNG4Q8TDN1 519 aa16.15■□□□□ 0.18
TARDBP-231ENST00000639599 PAAF1Q9BRP4 392 aa16.15■□□□□ 0.18
TARDBP-231ENST00000639599 TCHPQ9BT92 498 aa16.15■□□□□ 0.18
TARDBP-231ENST00000639599 DDX19AQ9NUU7 478 aaKnown RBP16.15■□□□□ 0.18
TARDBP-231ENST00000639599 KMT2EQ8IZD2 1858 aa16.14■□□□□ 0.17
TARDBP-231ENST00000639599 PROB1E7EW31 1015 aa16.14■□□□□ 0.17
TARDBP-231ENST00000639599 PTGESO14684 152 aa16.14■□□□□ 0.17
TARDBP-231ENST00000639599 CCL16O15467 120 aa16.14■□□□□ 0.17
TARDBP-231ENST00000639599 ST3GAL1Q11201 340 aa16.14■□□□□ 0.17
TARDBP-231ENST00000639599 ZRSR1Q15695 479 aaKnown RBP16.14■□□□□ 0.17
TARDBP-231ENST00000639599 ZNF568Q3ZCX4 644 aa16.14■□□□□ 0.17
TARDBP-231ENST00000639599 SPECC1Q5M775 1068 aa16.14■□□□□ 0.17
TARDBP-231ENST00000639599 LILRA6Q6PI73 481 aa16.14■□□□□ 0.17
TARDBP-231ENST00000639599 MTSS1LQ765P7 747 aa16.14■□□□□ 0.17
TARDBP-231ENST00000639599 FRMD5Q7Z6J6 570 aa16.14■□□□□ 0.17
TARDBP-231ENST00000639599 SLC7A14Q8TBB6 771 aa16.14■□□□□ 0.17
TARDBP-231ENST00000639599 SHDQ96IW2 340 aa16.14■□□□□ 0.17
TARDBP-231ENST00000639599 DRC1Q96MC2 740 aa16.14■□□□□ 0.17
TARDBP-231ENST00000639599 MRPL4Q9BYD3 311 aaKnown RBP16.14■□□□□ 0.17
TARDBP-231ENST00000639599 CCDC113Q9H0I3 377 aa16.14■□□□□ 0.17
TARDBP-231ENST00000639599 TBC1D17Q9HA65 648 aa16.14■□□□□ 0.17
TARDBP-231ENST00000639599 ARHGEF3Q9NR81 526 aa16.14■□□□□ 0.17
TARDBP-231ENST00000639599 SLC38A7Q9NVC3 462 aa16.14■□□□□ 0.17
TARDBP-231ENST00000639599 USP20Q9Y2K6 914 aa16.14■□□□□ 0.17
TARDBP-231ENST00000639599 NUMBLQ9Y6R0 609 aa16.14■□□□□ 0.17
TARDBP-231ENST00000639599 ARID2Q68CP9 1835 aa16.14■□□□□ 0.17
TARDBP-231ENST00000639599 TTLL13PA6NNM8 815 aa16.13■□□□□ 0.17
TARDBP-231ENST00000639599 PI15O43692 258 aa16.13■□□□□ 0.17
TARDBP-231ENST00000639599 HOXA9P31269 272 aa16.13■□□□□ 0.17
TARDBP-231ENST00000639599 ELF1P32519 619 aa16.13■□□□□ 0.17
TARDBP-231ENST00000639599 PEX3P56589 373 aa16.13■□□□□ 0.17
TARDBP-231ENST00000639599 EEF1DP3Q658K8 133 aa16.13■□□□□ 0.17
TARDBP-231ENST00000639599 DCLRE1AQ6PJP8 1040 aa16.13■□□□□ 0.17
TARDBP-231ENST00000639599 ANKS3Q6ZW76 656 aa16.13■□□□□ 0.17
TARDBP-231ENST00000639599 LNX1Q8TBB1 728 aaPredicted RBP16.13■□□□□ 0.17
TARDBP-231ENST00000639599 GPR152Q8TDT2 470 aa16.13■□□□□ 0.17
TARDBP-231ENST00000639599 CLSTN3Q9BQT9 956 aa16.13■□□□□ 0.17
TARDBP-231ENST00000639599 KMT5AQ9NQR1 393 aa16.13■□□□□ 0.17
TARDBP-231ENST00000639599 CDH7Q9ULB5 785 aa16.13■□□□□ 0.17
TARDBP-231ENST00000639599 ZDBF2Q9HCK1 2354 aa16.13■□□□□ 0.17
TARDBP-231ENST00000639599 PRR23AA6NEV1 266 aa16.12■□□□□ 0.17
TARDBP-231ENST00000639599 LAD1O00515 517 aa16.12■□□□□ 0.17
TARDBP-231ENST00000639599 HARSP12081 509 aaKnown RBP16.12■□□□□ 0.17
TARDBP-231ENST00000639599 NPR3P17342 541 aa16.12■□□□□ 0.17
TARDBP-231ENST00000639599 OR1D2P34982 312 aa16.12■□□□□ 0.17
TARDBP-231ENST00000639599 CLCNKBP51801 687 aa16.12■□□□□ 0.17
TARDBP-231ENST00000639599 OSTNP61366 133 aa16.12■□□□□ 0.17
TARDBP-231ENST00000639599 STRN3Q13033 797 aa16.12■□□□□ 0.17
TARDBP-231ENST00000639599 PTGDRQ13258 359 aa16.12■□□□□ 0.17
TARDBP-231ENST00000639599 PDIA5Q14554 519 aa16.12■□□□□ 0.17
TARDBP-231ENST00000639599 NBR1Q14596 966 aa16.12■□□□□ 0.17
TARDBP-231ENST00000639599 UVSSAQ2YD98 709 aa16.12■□□□□ 0.17
TARDBP-231ENST00000639599 AXDND1Q5T1B0 1012 aaPredicted RBP16.12■□□□□ 0.17
TARDBP-231ENST00000639599 MCTP1Q6DN14 999 aa16.12■□□□□ 0.17
TARDBP-231ENST00000639599 DTHD1Q6ZMT9 781 aa16.12■□□□□ 0.17
TARDBP-231ENST00000639599 ASCL5Q7RTU5 278 aa16.12■□□□□ 0.17
TARDBP-231ENST00000639599 DDX27Q96GQ7 796 aaKnown RBP16.12■□□□□ 0.17
TARDBP-231ENST00000639599 CDK5RAP3Q96JB5 506 aa16.12■□□□□ 0.17
TARDBP-231ENST00000639599 POLD4Q9HCU8 107 aa16.12■□□□□ 0.17
TARDBP-231ENST00000639599 TNFSF13BQ9Y275 285 aa16.12■□□□□ 0.17
TARDBP-231ENST00000639599 NUB1Q9Y5A7 615 aa16.12■□□□□ 0.17
TARDBP-231ENST00000639599 CDY1Q9Y6F8 540 aa16.12■□□□□ 0.17
TARDBP-231ENST00000639599 TMEM189-UBE2V1I3L0A0 370 aa16.11■□□□□ 0.17
TARDBP-231ENST00000639599 HIP1RO75146 1068 aa16.11■□□□□ 0.17
TARDBP-231ENST00000639599 LRG1P02750 347 aa16.11■□□□□ 0.17
TARDBP-231ENST00000639599 MATR3P43243 847 aaKnown RBP eCLIP16.11■□□□□ 0.17
TARDBP-231ENST00000639599 HTR4Q13639 388 aa16.11■□□□□ 0.17
TARDBP-231ENST00000639599 PABPC1LQ4VXU2 614 aaKnown RBP16.11■□□□□ 0.17
TARDBP-231ENST00000639599 ZC3H14Q6PJT7 736 aaKnown RBP16.11■□□□□ 0.17
TARDBP-231ENST00000639599 MTRRQ9UBK8 725 aa16.11■□□□□ 0.17
TARDBP-231ENST00000639599 KCNG1Q9UIX4 513 aa16.11■□□□□ 0.17
TARDBP-231ENST00000639599 SIT1Q9Y3P8 196 aa16.11■□□□□ 0.17
TARDBP-231ENST00000639599 RBM19Q9Y4C8 960 aaKnown RBP16.11■□□□□ 0.17
TARDBP-231ENST00000639599 KRBA1A5PL33 1030 aa16.1■□□□□ 0.17
TARDBP-231ENST00000639599 PRRG1O14668 218 aa16.1■□□□□ 0.17
TARDBP-231ENST00000639599 FGFR3P22607 806 aa16.1■□□□□ 0.17
TARDBP-231ENST00000639599 GRM5P41594 1212 aa16.1■□□□□ 0.17
TARDBP-231ENST00000639599 NPTX2P47972 431 aa16.1■□□□□ 0.17
TARDBP-231ENST00000639599 SMTNP53814 917 aa16.1■□□□□ 0.17
TARDBP-231ENST00000639599 ARPP19P56211 112 aa16.1■□□□□ 0.17
TARDBP-231ENST00000639599 NTHL1P78549 312 aa16.1■□□□□ 0.17
TARDBP-231ENST00000639599 PFKPQ01813 784 aa16.1■□□□□ 0.17
TARDBP-231ENST00000639599 RAB33AQ14088 237 aa16.1■□□□□ 0.17
TARDBP-231ENST00000639599 NT5DC1Q5TFE4 455 aa16.1■□□□□ 0.17
TARDBP-231ENST00000639599 RTL10Q7L3V2 364 aa16.1■□□□□ 0.17
TARDBP-231ENST00000639599 ELMOD1Q8N336 334 aa16.1■□□□□ 0.17
TARDBP-231ENST00000639599 ST13P5Q8NFI4 369 aaPredicted RBP16.1■□□□□ 0.17
TARDBP-231ENST00000639599 ACAP3Q96P50 834 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms