RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 SNX29Q8TEQ0 813 aa20.33■□□□□ 0.85
CLN6-220ENST00000637450 NXPE3Q969Y0 559 aa20.33■□□□□ 0.85
CLN6-220ENST00000637450 RAB34Q9BZG1 259 aa20.33■□□□□ 0.85
CLN6-220ENST00000637450 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.33■□□□□ 0.852e-9■■■■■ 36.3
CLN6-220ENST00000637450 C2orf16Q68DN1 1984 aa20.32■□□□□ 0.84
CLN6-220ENST00000637450 K7ERI5 159 aa20.32■□□□□ 0.84
CLN6-220ENST00000637450 NARSO43776 548 aaKnown RBP20.32■□□□□ 0.84
CLN6-220ENST00000637450 PSMD5Q16401 504 aa20.32■□□□□ 0.84
CLN6-220ENST00000637450 CWF19L1Q69YN2 538 aaKnown RBP20.32■□□□□ 0.84
CLN6-220ENST00000637450 SLC44A3Q8N4M1 653 aa20.32■□□□□ 0.84
CLN6-220ENST00000637450 PPP1R10Q96QC0 940 aaKnown RBP20.32■□□□□ 0.84
CLN6-220ENST00000637450 FBXW11Q9UKB1 542 aa20.32■□□□□ 0.84
CLN6-220ENST00000637450 FBXL21Q9UKT6 434 aa20.32■□□□□ 0.84
CLN6-220ENST00000637450 DNM3Q9UQ16 869 aa20.32■□□□□ 0.84
CLN6-220ENST00000637450 TNFSF13BQ9Y275 285 aa20.32■□□□□ 0.84
CLN6-220ENST00000637450 PLXNA3P51805 1871 aa20.31■□□□□ 0.84
CLN6-220ENST00000637450 E9PMD0 336 aa20.31■□□□□ 0.84
CLN6-220ENST00000637450 LAD1O00515 517 aa20.31■□□□□ 0.84
CLN6-220ENST00000637450 PI15O43692 258 aa20.31■□□□□ 0.84
CLN6-220ENST00000637450 LAMP2P13473 410 aa20.31■□□□□ 0.84
CLN6-220ENST00000637450 AOC1P19801 751 aa20.31■□□□□ 0.84
CLN6-220ENST00000637450 IL17AQ16552 155 aa20.31■□□□□ 0.84
CLN6-220ENST00000637450 PDXDC1Q6P996 788 aa20.31■□□□□ 0.84
CLN6-220ENST00000637450 SIX5Q8N196 739 aa20.31■□□□□ 0.84
CLN6-220ENST00000637450 WNT16Q9UBV4 365 aa20.31■□□□□ 0.84
CLN6-220ENST00000637450 CCDC169A6NNP5 214 aa20.3■□□□□ 0.84
CLN6-220ENST00000637450 PROB1E7EW31 1015 aa20.3■□□□□ 0.84
CLN6-220ENST00000637450 TMEM189-UBE2V1I3L0A0 370 aa20.3■□□□□ 0.84
CLN6-220ENST00000637450 IGFBP6P24592 240 aaPredicted RBP20.3■□□□□ 0.84
CLN6-220ENST00000637450 PRPHP41219 470 aa20.3■□□□□ 0.84
CLN6-220ENST00000637450 NPTX2P47972 431 aa20.3■□□□□ 0.84
CLN6-220ENST00000637450 C8orf34Q49A92 452 aa20.3■□□□□ 0.84
CLN6-220ENST00000637450 KRT79Q5XKE5 535 aa20.3■□□□□ 0.84
CLN6-220ENST00000637450 DCLRE1AQ6PJP8 1040 aa20.3■□□□□ 0.84
CLN6-220ENST00000637450 CD300LGQ6UXG3 332 aa20.3■□□□□ 0.84
CLN6-220ENST00000637450 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.3■□□□□ 0.84
CLN6-220ENST00000637450 APBB1IPQ7Z5R6 666 aaPredicted RBP20.3■□□□□ 0.84
CLN6-220ENST00000637450 DAW1Q8N136 415 aa20.3■□□□□ 0.84
CLN6-220ENST00000637450 ACO2Q99798 780 aaKnown RBP20.3■□□□□ 0.84
CLN6-220ENST00000637450 TMEM134Q9H6X4 195 aa20.3■□□□□ 0.84
CLN6-220ENST00000637450 PTPRHQ9HD43 1115 aa20.3■□□□□ 0.84
CLN6-220ENST00000637450 PP2D1A8MPX8 630 aa20.29■□□□□ 0.84
CLN6-220ENST00000637450 ANHXE9PGG2 379 aa20.29■□□□□ 0.84
CLN6-220ENST00000637450 ADAM12O43184 909 aa20.29■□□□□ 0.84
CLN6-220ENST00000637450 ST18O60284 1047 aa20.29■□□□□ 0.84
CLN6-220ENST00000637450 GFRA3O60609 400 aa20.29■□□□□ 0.84
CLN6-220ENST00000637450 HIP1RO75146 1068 aa20.29■□□□□ 0.84
CLN6-220ENST00000637450 B3GAT3O94766 335 aa20.29■□□□□ 0.84
CLN6-220ENST00000637450 HNRNPA1P09651 372 aaKnown RBP eCLIP20.29■□□□□ 0.84
CLN6-220ENST00000637450 FGFR3P22607 806 aa20.29■□□□□ 0.84
CLN6-220ENST00000637450 CDC25AP30304 524 aa20.29■□□□□ 0.84
CLN6-220ENST00000637450 CLCNKBP51801 687 aa20.29■□□□□ 0.84
CLN6-220ENST00000637450 PEX3P56589 373 aa20.29■□□□□ 0.84
CLN6-220ENST00000637450 GLRA4Q5JXX5 417 aa20.29■□□□□ 0.84
CLN6-220ENST00000637450 RINT1Q6NUQ1 792 aa20.29■□□□□ 0.84
CLN6-220ENST00000637450 ALKAL1Q6UXT8 129 aa20.29■□□□□ 0.84
CLN6-220ENST00000637450 DTHD1Q6ZMT9 781 aa20.29■□□□□ 0.84
CLN6-220ENST00000637450 C1orf186Q6ZWK4 172 aa20.29■□□□□ 0.84
CLN6-220ENST00000637450 GET4Q7L5D6 327 aaPredicted RBP20.29■□□□□ 0.84
CLN6-220ENST00000637450 UROC1Q96N76 676 aa20.29■□□□□ 0.84
CLN6-220ENST00000637450 RTP3Q9BQQ7 232 aa20.29■□□□□ 0.84
CLN6-220ENST00000637450 MMTAG2Q9BU76 263 aaKnown RBP20.29■□□□□ 0.84
CLN6-220ENST00000637450 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.29■□□□□ 0.84
CLN6-220ENST00000637450 SMIM28A0A1B0GU29 152 aa20.28■□□□□ 0.84
CLN6-220ENST00000637450 CFHP08603 1231 aa20.28■□□□□ 0.84
CLN6-220ENST00000637450 SRFP11831 508 aa20.28■□□□□ 0.84
CLN6-220ENST00000637450 FSHRP23945 695 aa20.28■□□□□ 0.84
CLN6-220ENST00000637450 HOXA9P31269 272 aa20.28■□□□□ 0.84
CLN6-220ENST00000637450 GRM5P41594 1212 aa20.28■□□□□ 0.84
CLN6-220ENST00000637450 RAB33AQ14088 237 aa20.28■□□□□ 0.84
CLN6-220ENST00000637450 UPP1Q16831 310 aa20.28■□□□□ 0.84
CLN6-220ENST00000637450 XKR4Q5GH76 650 aa20.28■□□□□ 0.84
CLN6-220ENST00000637450 PPM1LQ5SGD2 360 aa20.28■□□□□ 0.84
CLN6-220ENST00000637450 LIN9Q5TKA1 542 aa20.28■□□□□ 0.84
CLN6-220ENST00000637450 TAS1R3Q7RTX0 852 aa20.28■□□□□ 0.84
CLN6-220ENST00000637450 GRASPQ7Z6J2 395 aaPredicted RBP20.28■□□□□ 0.84
CLN6-220ENST00000637450 RUSC1Q9BVN2 902 aa20.28■□□□□ 0.84
CLN6-220ENST00000637450 ARHGAP28Q9P2N2 729 aa20.28■□□□□ 0.84
CLN6-220ENST00000637450 RBM19Q9Y4C8 960 aaKnown RBP20.28■□□□□ 0.84
CLN6-220ENST00000637450 ZFP37Q9Y6Q3 630 aaPredicted RBP20.28■□□□□ 0.84
CLN6-220ENST00000637450 PHLPP2Q6ZVD8 1323 aa20.27■□□□□ 0.84
CLN6-220ENST00000637450 KRBA1A5PL33 1030 aa20.27■□□□□ 0.84
CLN6-220ENST00000637450 C8AP07357 584 aa20.27■□□□□ 0.84
CLN6-220ENST00000637450 OR1D2P34982 312 aa20.27■□□□□ 0.84
CLN6-220ENST00000637450 NBL1P41271 181 aa20.27■□□□□ 0.84
CLN6-220ENST00000637450 YARSP54577 528 aaKnown RBP20.27■□□□□ 0.84
CLN6-220ENST00000637450 MAPK7Q13164 816 aa20.27■□□□□ 0.84
CLN6-220ENST00000637450 DMP1Q13316 513 aaPredicted RBP20.27■□□□□ 0.84
CLN6-220ENST00000637450 HTR4Q13639 388 aa20.27■□□□□ 0.84
CLN6-220ENST00000637450 UVSSAQ2YD98 709 aa20.27■□□□□ 0.84
CLN6-220ENST00000637450 KCNK18Q7Z418 384 aa20.27■□□□□ 0.84
CLN6-220ENST00000637450 CEP120Q8N960 986 aa20.27■□□□□ 0.84
CLN6-220ENST00000637450 DRC1Q96MC2 740 aa20.27■□□□□ 0.84
CLN6-220ENST00000637450 NTPCRQ9BSD7 190 aaKnown RBP20.27■□□□□ 0.84
CLN6-220ENST00000637450 CCDC94Q9BW85 323 aaPredicted RBP20.27■□□□□ 0.84
CLN6-220ENST00000637450 MRPL4Q9BYD3 311 aaKnown RBP20.27■□□□□ 0.84
CLN6-220ENST00000637450 CDT1Q9H211 546 aa20.27■□□□□ 0.84
CLN6-220ENST00000637450 C17orf75Q9HAS0 396 aa20.27■□□□□ 0.84
CLN6-220ENST00000637450 KMT5AQ9NQR1 393 aa20.27■□□□□ 0.84
CLN6-220ENST00000637450 MTRRQ9UBK8 725 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms