RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 RNF10Q8N5U6 811 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-231ENST00000636816 CEP120Q8N960 986 aa17.12■□□□□ 0.33
CACNA1A-231ENST00000636816 SHC3Q92529 594 aa17.12■□□□□ 0.33
CACNA1A-231ENST00000636816 CCDC102AQ96A19 550 aa17.12■□□□□ 0.33
CACNA1A-231ENST00000636816 FAM212AQ96EL1 285 aa17.12■□□□□ 0.33
CACNA1A-231ENST00000636816 CGRRF1Q99675 332 aa17.12■□□□□ 0.33
CACNA1A-231ENST00000636816 ARID3AQ99856 593 aa17.12■□□□□ 0.33
CACNA1A-231ENST00000636816 SEPT11Q9NVA2 429 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-231ENST00000636816 SAR1BQ9Y6B6 198 aa17.12■□□□□ 0.33
CACNA1A-231ENST00000636816 EFCAB8A8MWE9 144 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 OGTO15294 1046 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 PALMO75781 387 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 CCDC172P0C7W6 258 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 CHRNB2P17787 502 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 TM4SF4P48230 202 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 GALCP54803 685 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 MPZL3Q6UWV2 235 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 SRGAP1Q7Z6B7 1085 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 NOP9Q86U38 636 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 BRSK2Q8IWQ3 736 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 TMEM192Q8IY95 271 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 KAT2BQ92831 832 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 ARHGAP39Q9C0H5 1083 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 JRKLQ9Y4A0 524 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 H2AFZP0C0S5 128 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 RGS2P41220 211 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 PIK3CAP42336 1068 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 SREBF2Q12772 1141 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 TUBB2AQ13885 445 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 AMHR2Q16671 573 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 TMEM132AQ24JP5 1023 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 ZNF568Q3ZCX4 644 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 CYP4F22Q6NT55 531 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 H2AFVQ71UI9 128 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 RSRC2Q7L4I2 434 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 TLK2Q86UE8 772 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 RPUSD2Q8IZ73 545 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 KIAA0319LQ8IZA0 1049 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 UBXN4Q92575 508 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 CAPZA3Q96KX2 299 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 TUBB2BQ9BVA1 445 aa17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 CPSF3Q9UKF6 684 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-231ENST00000636816 ANK1P16157 1881 aa17.1■□□□□ 0.33
CACNA1A-231ENST00000636816 ANO9A1A5B4 782 aa17.1■□□□□ 0.33
CACNA1A-231ENST00000636816 KIF3CO14782 793 aa17.1■□□□□ 0.33
CACNA1A-231ENST00000636816 CST3P01034 146 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-231ENST00000636816 IGHA2P01877 340 aa17.1■□□□□ 0.33
CACNA1A-231ENST00000636816 PHKA2P46019 1235 aa17.1■□□□□ 0.33
CACNA1A-231ENST00000636816 BEX3Q00994 111 aa17.1■□□□□ 0.33
CACNA1A-231ENST00000636816 HIC1Q14526 733 aa17.1■□□□□ 0.33
CACNA1A-231ENST00000636816 TEX35Q5T0J7 233 aa17.1■□□□□ 0.33
CACNA1A-231ENST00000636816 TAF3Q5VWG9 929 aa17.1■□□□□ 0.33
CACNA1A-231ENST00000636816 PAXIP1Q6ZW49 1069 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-231ENST00000636816 VTI1AQ96AJ9 217 aa17.1■□□□□ 0.33
CACNA1A-231ENST00000636816 CPB2Q96IY4 423 aa17.1■□□□□ 0.33
CACNA1A-231ENST00000636816 ALS2CR12Q96Q35 445 aa17.1■□□□□ 0.33
CACNA1A-231ENST00000636816 PCDHB18PQ96TA0 734 aa17.1■□□□□ 0.33
CACNA1A-231ENST00000636816 NFKBIZQ9BYH8 718 aa17.1■□□□□ 0.33
CACNA1A-231ENST00000636816 APOBEC3GQ9HC16 384 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-231ENST00000636816 GPBP1L1Q9HC44 474 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-231ENST00000636816 TRIP12Q14669 1992 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-231ENST00000636816 GPR25O00155 361 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 TMOD1P28289 359 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 POU5F1BQ06416 359 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 TMEM62Q0P6H9 643 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 WHAMMP3Q1A5X7 153 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 FMNL3Q8IVF7 1028 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 CEP112Q8N8E3 955 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 EPS8L1Q8TE68 723 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 LMBR1Q8WVP7 490 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 MMS19Q96T76 1030 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 PSMB7Q99436 277 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 APBA2Q99767 749 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 TLR10Q9BXR5 811 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 CDT1Q9H211 546 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 GOLPH3Q9H4A6 298 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 NOCTQ9UK39 431 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 TNFSF13BQ9Y275 285 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 UMODL1Q5DID0 1318 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 GRID2IPA4D2P6 1211 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 BTNL10A8MVZ5 291 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 FTCDO95954 541 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 SMIM10L2AP0DMW4 78 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 SMIM10L2BP0DMW5 78 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 ABCB4P21439 1286 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 CXCR5P32302 372 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 NFRKBQ6P4R8 1299 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 TMEM130Q8N3G9 435 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 COG1Q8WTW3 980 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 NLRP7Q8WX94 980 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 C1orf112Q9NSG2 853 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 PRMT7Q9NVM4 692 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 SNX12Q9UMY4 172 aa17.09■□□□□ 0.33
CACNA1A-231ENST00000636816 CA12O43570 354 aa17.08■□□□□ 0.33
CACNA1A-231ENST00000636816 ZC3H11AO75152 810 aaKnown RBP eCLIP17.08■□□□□ 0.33
CACNA1A-231ENST00000636816 TBC1D8O95759 1140 aa17.08■□□□□ 0.33
CACNA1A-231ENST00000636816 F2P00734 622 aa17.08■□□□□ 0.33
CACNA1A-231ENST00000636816 MMEP08473 750 aa17.08■□□□□ 0.33
CACNA1A-231ENST00000636816 FGFR4P22455 802 aa17.08■□□□□ 0.33
CACNA1A-231ENST00000636816 NOP2P46087 812 aaKnown RBP17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms