RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 SF3A1Q15459 793 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-230ENST00000636768 NAB2Q15742 525 aa16.46■□□□□ 0.23
CACNA1A-230ENST00000636768 RTP2Q5QGT7 225 aa16.46■□□□□ 0.23
CACNA1A-230ENST00000636768 FAM171A1Q5VUB5 890 aa16.46■□□□□ 0.23
CACNA1A-230ENST00000636768 PRSS55Q6UWB4 352 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-230ENST00000636768 SPATA31D4Q6ZUB0 917 aa16.46■□□□□ 0.23
CACNA1A-230ENST00000636768 CEP120Q8N960 986 aa16.46■□□□□ 0.23
CACNA1A-230ENST00000636768 FEZF2Q8TBJ5 459 aa16.46■□□□□ 0.23
CACNA1A-230ENST00000636768 SPIRE2Q8WWL2 714 aa16.46■□□□□ 0.23
CACNA1A-230ENST00000636768 TTPALQ9BTX7 342 aa16.46■□□□□ 0.23
CACNA1A-230ENST00000636768 FNIP2Q9P278 1114 aa16.46■□□□□ 0.23
CACNA1A-230ENST00000636768 USTQ9Y2C2 406 aa16.46■□□□□ 0.23
CACNA1A-230ENST00000636768 NPHP3-ACAD11A0A0J9YXS1 232 aa16.45■□□□□ 0.22
CACNA1A-230ENST00000636768 CCDC195A0A1B0GUA6 201 aa16.45■□□□□ 0.22
CACNA1A-230ENST00000636768 TGM5O43548 720 aa16.45■□□□□ 0.22
CACNA1A-230ENST00000636768 MCF2P10911 925 aa16.45■□□□□ 0.22
CACNA1A-230ENST00000636768 MTMR3Q13615 1198 aa16.45■□□□□ 0.22
CACNA1A-230ENST00000636768 DHX8Q14562 1220 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-230ENST00000636768 MPZL3Q6UWV2 235 aa16.45■□□□□ 0.22
CACNA1A-230ENST00000636768 GPBP1Q86WP2 473 aa16.45■□□□□ 0.22
CACNA1A-230ENST00000636768 PLCD3Q8N3E9 789 aa16.45■□□□□ 0.22
CACNA1A-230ENST00000636768 KREMEN2Q8NCW0 462 aa16.45■□□□□ 0.22
CACNA1A-230ENST00000636768 TMEM161BQ8NDZ6 487 aa16.45■□□□□ 0.22
CACNA1A-230ENST00000636768 CMASQ8NFW8 434 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-230ENST00000636768 PBXIP1Q96AQ6 731 aa16.45■□□□□ 0.22
CACNA1A-230ENST00000636768 ACSF2Q96CM8 615 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-230ENST00000636768 PPP1R10Q96QC0 940 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-230ENST00000636768 NTPCRQ9BSD7 190 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-230ENST00000636768 BACH2Q9BYV9 841 aa16.45■□□□□ 0.22
CACNA1A-230ENST00000636768 PTPRHQ9HD43 1115 aa16.45■□□□□ 0.22
CACNA1A-230ENST00000636768 LARSQ9P2J5 1176 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-230ENST00000636768 ANKFY1Q9P2R3 1169 aa16.45■□□□□ 0.22
CACNA1A-230ENST00000636768 SMIM28A0A1B0GU29 152 aa16.44■□□□□ 0.22
CACNA1A-230ENST00000636768 B3GAT3O94766 335 aa16.44■□□□□ 0.22
CACNA1A-230ENST00000636768 KRT18P05783 430 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-230ENST00000636768 PSMD5Q16401 504 aa16.44■□□□□ 0.22
CACNA1A-230ENST00000636768 PDXDC1Q6P996 788 aa16.44■□□□□ 0.22
CACNA1A-230ENST00000636768 OTOP3Q7RTS5 596 aa16.44■□□□□ 0.22
CACNA1A-230ENST00000636768 SUGP1Q8IWZ8 645 aaKnown RBP16.44■□□□□ 0.22
CACNA1A-230ENST00000636768 ZDHHC14Q8IZN3 488 aa16.44■□□□□ 0.22
CACNA1A-230ENST00000636768 HDAC7Q8WUI4 952 aa16.44■□□□□ 0.22
CACNA1A-230ENST00000636768 PIK3R5Q8WYR1 880 aa16.44■□□□□ 0.22
CACNA1A-230ENST00000636768 BICD1Q96G01 975 aa16.44■□□□□ 0.22
CACNA1A-230ENST00000636768 SNX27Q96L92 541 aa16.44■□□□□ 0.22
CACNA1A-230ENST00000636768 UROC1Q96N76 676 aa16.44■□□□□ 0.22
CACNA1A-230ENST00000636768 ACAP3Q96P50 834 aa16.44■□□□□ 0.22
CACNA1A-230ENST00000636768 PLEKHA4Q9H4M7 779 aa16.44■□□□□ 0.22
CACNA1A-230ENST00000636768 GOLGA2P5Q9HBQ8 144 aa16.44■□□□□ 0.22
CACNA1A-230ENST00000636768 SLC38A7Q9NVC3 462 aa16.44■□□□□ 0.22
CACNA1A-230ENST00000636768 LIMD1Q9UGP4 676 aa16.44■□□□□ 0.22
CACNA1A-230ENST00000636768 ODF2LQ9ULJ1 636 aa16.44■□□□□ 0.22
CACNA1A-230ENST00000636768 SORCS3Q9UPU3 1222 aa16.44■□□□□ 0.22
CACNA1A-230ENST00000636768 H0YCG3 227 aa16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 TOM1L1O75674 476 aa16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 RFPL2O75678 378 aa16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 BRD1O95696 1058 aa16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 C1RP00736 705 aa16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 ASGR2P07307 311 aa16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 MAPTP10636 758 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 PLCG1P19174 1290 aa16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 PROZP22891 400 aa16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 MATR3P43243 847 aaKnown RBP eCLIP16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 CLCNKBP51801 687 aa16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 GRIN1Q05586 938 aa16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 NOLC1Q14978 699 aaKnown RBP eCLIP16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 KARSQ15046 597 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 ARSHQ5FYA8 562 aa16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 DCLRE1AQ6PJP8 1040 aa16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 CYP26C1Q6V0L0 522 aa16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 BMP8AQ7Z5Y6 402 aa16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 SMG7Q92540 1137 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 REEP2Q9BRK0 252 aa16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 PIDD1Q9HB75 910 aa16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 ZDHHC7Q9NXF8 308 aa16.43■□□□□ 0.22
CACNA1A-230ENST00000636768 TMEM189-UBE2V1I3L0A0 370 aa16.42■□□□□ 0.22
CACNA1A-230ENST00000636768 ABLIM1O14639 778 aa16.42■□□□□ 0.22
CACNA1A-230ENST00000636768 TRAPPC3O43617 180 aa16.42■□□□□ 0.22
CACNA1A-230ENST00000636768 FAM13AO94988 1023 aa16.42■□□□□ 0.22
CACNA1A-230ENST00000636768 SYT1P21579 422 aa16.42■□□□□ 0.22
CACNA1A-230ENST00000636768 MCM6Q14566 821 aa16.42■□□□□ 0.22
CACNA1A-230ENST00000636768 XKR4Q5GH76 650 aa16.42■□□□□ 0.22
CACNA1A-230ENST00000636768 LIN9Q5TKA1 542 aa16.42■□□□□ 0.22
CACNA1A-230ENST00000636768 ZPBP2Q6X784 338 aa16.42■□□□□ 0.22
CACNA1A-230ENST00000636768 UBALD2Q8IYN6 164 aa16.42■□□□□ 0.22
CACNA1A-230ENST00000636768 MYCT1Q8N699 235 aa16.42■□□□□ 0.22
CACNA1A-230ENST00000636768 LNX1Q8TBB1 728 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-230ENST00000636768 RAD54LQ92698 747 aa16.42■□□□□ 0.22
CACNA1A-230ENST00000636768 STAMQ92783 540 aa16.42■□□□□ 0.22
CACNA1A-230ENST00000636768 ZBTB45Q96K62 511 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-230ENST00000636768 FOXD4L1Q9NU39 408 aa16.42■□□□□ 0.22
CACNA1A-230ENST00000636768 CLIC4Q9Y696 253 aa16.42■□□□□ 0.22
CACNA1A-230ENST00000636768 TDRD15B5MCY1 1934 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-230ENST00000636768 CLUHO75153 1309 aa16.42■□□□□ 0.22
CACNA1A-230ENST00000636768 K7ENM7 598 aa16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 CLDN3O15551 220 aa16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 TBCAO75347 108 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 KCNE1P15382 129 aa16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 MARCKSP29966 332 aaPredicted RBP16.41■□□□□ 0.22
CACNA1A-230ENST00000636768 GBP2P32456 591 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms