RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 USP17L10C9JJH3 530 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 DCTN3O75935 186 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 GFPT2O94808 682 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 SERPING1P05155 500 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 HNRNPCP07910 306 aaKnown RBP eCLIP11.48□□□□□ -0.577e-11■□□□□ 9.6
CHD2-223ENST00000636306 HARSP12081 509 aaKnown RBP11.48□□□□□ -0.57
CHD2-223ENST00000636306 BMP3P12645 472 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 MLH1P40692 756 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 POLGP54098 1239 aaPredicted RBP11.48□□□□□ -0.57
CHD2-223ENST00000636306 YARSP54577 528 aaKnown RBP11.48□□□□□ -0.57
CHD2-223ENST00000636306 RTP1P59025 263 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 IFI35P80217 286 aaPredicted RBP11.48□□□□□ -0.57
CHD2-223ENST00000636306 PRPF4BQ13523 1007 aaKnown RBP11.48□□□□□ -0.57
CHD2-223ENST00000636306 MTFR1Q15390 333 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 SLC9C1Q4G0N8 1177 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 SYDE2Q5VT97 1194 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 FBXO11Q86XK2 927 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 NIM1KQ8IY84 436 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 PROCA1Q8NCQ7 364 aaPredicted RBP11.48□□□□□ -0.57
CHD2-223ENST00000636306 AGBL3Q8NEM8 1001 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHD2-223ENST00000636306 SNX29Q8TEQ0 813 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 FAM151AQ8WW52 585 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 BAP1Q92560 729 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 LARP4BQ92615 738 aaKnown RBP11.48□□□□□ -0.57
CHD2-223ENST00000636306 P2RX5Q93086 422 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 TUBGCP5Q96RT8 1024 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 TBC1D10AQ9BXI6 508 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 BHMT2Q9H2M3 363 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 TDRD3Q9H7E2 651 aaKnown RBP11.48□□□□□ -0.57
CHD2-223ENST00000636306 EHMT1Q9H9B1 1298 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHD2-223ENST00000636306 LNPEPQ9UIQ6 1025 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 TTC7AQ9ULT0 858 aaPredicted RBP11.48□□□□□ -0.57
CHD2-223ENST00000636306 CHMP2BQ9UQN3 213 aa11.48□□□□□ -0.57
CHD2-223ENST00000636306 SPDYE2BA6NHP3 402 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 KRIT1O00522 736 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 KCNK3O14649 394 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 TBX3O15119 743 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 MAPK13O15264 365 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 SPDYE6P0CI01 402 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 PTPN4P29074 926 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 RGS2P41220 211 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 IFNAR2P48551 515 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 PMS1P54277 932 aaKnown RBP11.47□□□□□ -0.57
CHD2-223ENST00000636306 CACNB3P54284 484 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 PDE4DQ08499 809 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 CYLC2Q14093 348 aaPredicted RBP11.47□□□□□ -0.57
CHD2-223ENST00000636306 SPIDRQ14159 915 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 GIT2Q14161 759 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 VWA3BQ502W6 1294 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 TTBK2Q6IQ55 1244 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 FOXR2Q6PJQ5 311 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 ECHDC2Q86YB7 292 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 ZFPM1Q8IX07 1006 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 CCDC65Q8IXS2 484 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 ANKRD13CQ8N6S4 541 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 TTC8Q8TAM2 541 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 MAGEB18Q96M61 343 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 ZNF184Q99676 751 aaPredicted RBP11.47□□□□□ -0.57
CHD2-223ENST00000636306 TUBB6Q9BUF5 446 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 ANO3Q9BYT9 981 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 TSPYL2Q9H2G4 693 aaPredicted RBP11.47□□□□□ -0.57
CHD2-223ENST00000636306 DENND2DQ9H6A0 471 aaPredicted RBP11.47□□□□□ -0.57
CHD2-223ENST00000636306 TIMMDC1Q9NPL8 285 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 KCNQ5Q9NR82 932 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 BMP2KQ9NSY1 1161 aaPredicted RBP11.47□□□□□ -0.57
CHD2-223ENST00000636306 USH1CQ9Y6N9 552 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 PITPNM2Q9BZ72 1349 aa11.47□□□□□ -0.57
CHD2-223ENST00000636306 F5H6K3 240 aa11.46□□□□□ -0.57
CHD2-223ENST00000636306 KLRC4O43908 158 aa11.46□□□□□ -0.57
CHD2-223ENST00000636306 TDP2O95551 362 aa11.46□□□□□ -0.57
CHD2-223ENST00000636306 ALOX15P16050 662 aaPredicted RBP11.46□□□□□ -0.57
CHD2-223ENST00000636306 POLD1P28340 1107 aa11.46□□□□□ -0.57
CHD2-223ENST00000636306 SLC16A2P36021 539 aa11.46□□□□□ -0.57
CHD2-223ENST00000636306 ACADVLP49748 655 aa11.46□□□□□ -0.57
CHD2-223ENST00000636306 ADARP55265 1226 aaKnown RBP11.46□□□□□ -0.57
CHD2-223ENST00000636306 POU5F1Q01860 360 aaKnown RBP11.46□□□□□ -0.57
CHD2-223ENST00000636306 PLOD1Q02809 727 aaPredicted RBP11.46□□□□□ -0.57
CHD2-223ENST00000636306 GFPT1Q06210 699 aaPredicted RBP11.46□□□□□ -0.57
CHD2-223ENST00000636306 KLRC3Q07444 240 aa11.46□□□□□ -0.57
CHD2-223ENST00000636306 R3HDM1Q15032 1099 aaKnown RBP11.46□□□□□ -0.57
CHD2-223ENST00000636306 CLUL1Q15846 466 aa11.46□□□□□ -0.57
CHD2-223ENST00000636306 CLPPQ16740 277 aaPredicted RBP11.46□□□□□ -0.57
CHD2-223ENST00000636306 C4orf50Q6ZRC1 276 aa11.46□□□□□ -0.57
CHD2-223ENST00000636306 RRAGAQ7L523 313 aa11.46□□□□□ -0.57
CHD2-223ENST00000636306 SH3BP5LQ7L8J4 393 aa11.46□□□□□ -0.57
CHD2-223ENST00000636306 SPATA24Q86W54 205 aa11.46□□□□□ -0.57
CHD2-223ENST00000636306 ANKLE1Q8NAG6 615 aa11.46□□□□□ -0.57
CHD2-223ENST00000636306 ATP11CQ8NB49 1132 aa11.46□□□□□ -0.57
CHD2-223ENST00000636306 MTMR14Q8NCE2 650 aa11.46□□□□□ -0.57
CHD2-223ENST00000636306 RNF25Q96BH1 459 aaPredicted RBP11.46□□□□□ -0.57
CHD2-223ENST00000636306 MYLK2Q9H1R3 596 aa11.46□□□□□ -0.57
CHD2-223ENST00000636306 LRRC4CQ9HCJ2 640 aa11.46□□□□□ -0.57
CHD2-223ENST00000636306 SAR1AQ9NR31 198 aa11.46□□□□□ -0.57
CHD2-223ENST00000636306 ZDHHC18Q9NUE0 388 aa11.46□□□□□ -0.57
CHD2-223ENST00000636306 STX18Q9P2W9 335 aaKnown RBP11.46□□□□□ -0.57
CHD2-223ENST00000636306 PARP2Q9UGN5 583 aa11.46□□□□□ -0.57
CHD2-223ENST00000636306 ATF5Q9Y2D1 282 aaPredicted RBP11.46□□□□□ -0.57
CHD2-223ENST00000636306 DIS3Q9Y2L1 958 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms