RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 CHMP2BQ9UQN3 213 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 PRR23AA6NEV1 266 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 EVPLLA8MZ36 301 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 FKBP9O95302 570 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 POLD3Q15054 466 aaPredicted RBP5.85□□□□□ -1.47
SCN1A-209ENST00000635750 CYP4A22Q5TCH4 519 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ARHGAP17Q68EM7 881 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 FAM173BQ6P4H8 233 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 FKBP9P1Q75LS8 142 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 XXYLT1Q8NBI6 393 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 RFWD2Q8NHY2 731 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 CCDC3Q9BQI4 270 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 ADI1Q9BV57 179 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 MXD3Q9BW11 206 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 CDC23Q9UJX2 597 aa5.85□□□□□ -1.47
SCN1A-209ENST00000635750 MAP3K1Q13233 1512 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 ENC1O14682 589 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 P4HA2O15460 535 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 CCDC22O60826 627 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 GSPT1P15170 499 aaKnown RBP5.84□□□□□ -1.47
SCN1A-209ENST00000635750 PLCG1P19174 1290 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 BCAR1P56945 870 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 CSTF3Q12996 717 aaKnown RBP5.84□□□□□ -1.47
SCN1A-209ENST00000635750 INAQ16352 499 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 FAM83BQ5T0W9 1011 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 RNF180Q86T96 592 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 CLEC4FQ8N1N0 589 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 EEF2KMTQ96G04 330 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 PARK7Q99497 189 aaKnown RBP5.84□□□□□ -1.47
SCN1A-209ENST00000635750 C17orf80Q9BSJ5 609 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 NLNQ9BYT8 704 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 RAVER2Q9HCJ3 691 aaKnown RBP5.84□□□□□ -1.47
SCN1A-209ENST00000635750 PDE11AQ9HCR9 933 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 PCDHA6Q9UN73 950 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 PCDHA8Q9Y5H6 950 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 ABCC4O15439 1325 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 GH2P01242 217 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 CD4P01730 458 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 STAG3L1P0CL83 205 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 YWHAQP27348 245 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 MZF1P28698 734 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-209ENST00000635750 RANBP1P43487 201 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 CDK8P49336 464 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 KPNA1P52294 538 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-209ENST00000635750 GUCY1A3Q02108 690 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 UBE2SQ16763 222 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 AASDHQ4L235 1098 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-209ENST00000635750 LRRC24Q50LG9 513 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 NUGGCQ68CJ6 796 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 C11orf88Q6PI97 169 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 ACAD9Q9H845 621 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 MYO10Q9HD67 2058 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 MIF4GDA9UHW6 222 aaKnown RBP5.84□□□□□ -1.47
SCN1A-209ENST00000635750 F5H423 210 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-209ENST00000635750 BIRC5O15392 142 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 FTCDO95954 541 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 PHKG2P15735 406 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 GPR1P46091 355 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 GPS1Q13098 491 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 TMEM132DQ14C87 1099 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 PLCL1Q15111 1095 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 SARM1Q6SZW1 724 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 GLB1LQ6UWU2 654 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 PRUNE1Q86TP1 453 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 SLC35F6Q8N357 371 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 PSMC3P17980 439 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 CRKP46108 304 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 SERPINB4P48594 390 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 CPT1AP50416 773 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 DEFA1P59665 94 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 DEFA3P59666 94 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 HDLBPQ00341 1268 aaKnown RBP5.84□□□□□ -1.47
SCN1A-209ENST00000635750 RBL2Q08999 1139 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 CAMK2GQ13555 558 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-209ENST00000635750 MGAT5BQ3V5L5 792 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 COBLL1Q53SF7 1204 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 C1orf131Q8NDD1 294 aaKnown RBP5.84□□□□□ -1.47
SCN1A-209ENST00000635750 ELMO2Q96JJ3 720 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 MAGEB10Q96LZ2 347 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-209ENST00000635750 POLR3EQ9NVU0 708 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 CLIC4Q9Y696 253 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 LRRC14BA6NHZ5 514 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 CCDC188H7C350 402 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 GUCY2CP25092 1073 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 SNAPC2Q13487 334 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 GRAPQ13588 217 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 TTC23Q5W5X9 447 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 TIGD7Q6NT04 549 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-209ENST00000635750 PID1Q7Z2X4 250 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 PPM1NQ8N819 430 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 GRAPLQ8TC17 118 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-209ENST00000635750 RIN2Q8WYP3 895 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-209ENST00000635750 DYDC2Q96IM9 177 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 SLITRK1Q96PX8 696 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 MRPL1Q9BYD6 325 aaKnown RBP5.84□□□□□ -1.47
SCN1A-209ENST00000635750 POLR3FQ9H1D9 316 aaPredicted RBP5.84□□□□□ -1.47
SCN1A-209ENST00000635750 SCN3BQ9NY72 215 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 VPS9D1Q9Y2B5 631 aa5.84□□□□□ -1.47
SCN1A-209ENST00000635750 TTLL13PA6NNM8 815 aa5.84□□□□□ -1.48
SCN1A-209ENST00000635750 ATP9BO43861 1147 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms