RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 TPM4P67936 248 aa15.69■□□□□ 0.1
LINC00339-208ENST00000634934 SHHQ15465 462 aa15.69■□□□□ 0.1
LINC00339-208ENST00000634934 DNTTIP2Q5QJE6 756 aaKnown RBP15.69■□□□□ 0.1
LINC00339-208ENST00000634934 CRELD2Q6UXH1 353 aaPredicted RBP15.69■□□□□ 0.1
LINC00339-208ENST00000634934 FAM43BQ6ZT52 329 aaPredicted RBP15.69■□□□□ 0.1
LINC00339-208ENST00000634934 HACE1Q8IYU2 909 aa15.69■□□□□ 0.1
LINC00339-208ENST00000634934 ACAP3Q96P50 834 aa15.69■□□□□ 0.1
LINC00339-208ENST00000634934 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.69■□□□□ 0.1
LINC00339-208ENST00000634934 TRAIPQ9BWF2 469 aa15.69■□□□□ 0.1
LINC00339-208ENST00000634934 RNF39Q9H2S5 420 aa15.69■□□□□ 0.1
LINC00339-208ENST00000634934 RPF1Q9H9Y2 349 aaKnown RBP15.69■□□□□ 0.1
LINC00339-208ENST00000634934 RBAKQ9NYW8 714 aaPredicted RBP15.69■□□□□ 0.1
LINC00339-208ENST00000634934 MAGEC2Q9UBF1 373 aaPredicted RBP15.69■□□□□ 0.1
LINC00339-208ENST00000634934 PARP2Q9UGN5 583 aa15.69■□□□□ 0.1
LINC00339-208ENST00000634934 CPSF3Q9UKF6 684 aaKnown RBP15.69■□□□□ 0.1
LINC00339-208ENST00000634934 ABHD14A-ACY1A0A1B0GW23 586 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 GNA14O95837 355 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 ADRB2P07550 413 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 ITGA4P13612 1032 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 CDK11BP21127 795 aaKnown RBP15.68■□□□□ 0.1
LINC00339-208ENST00000634934 YARSP54577 528 aaKnown RBP15.68■□□□□ 0.1
LINC00339-208ENST00000634934 ZNF365Q70YC5 407 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 OTOP2Q7RTS6 562 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 ECHDC2Q86YB7 292 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 FAM114A1Q8IWE2 563 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 LPPQ93052 612 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 CNOT6LQ96LI5 555 aaKnown RBP15.68■□□□□ 0.1
LINC00339-208ENST00000634934 FBXL18Q96ME1 805 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 ZNF830Q96NB3 372 aaPredicted RBP15.68■□□□□ 0.1
LINC00339-208ENST00000634934 MKNK1Q9BUB5 465 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 TRIM5Q9C035 493 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 IMPACTQ9P2X3 320 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 PYCARDQ9ULZ3 195 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.68■□□□□ 0.1
LINC00339-208ENST00000634934 KCNJ18B7U540 433 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 ZNF623O75123 536 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 RECQL4O94761 1208 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 FGBP02675 491 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 CXCL8P10145 99 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 KRT13P13646 458 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 GSDMDP57764 484 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 CYP24A1Q07973 514 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 KCNJ12Q14500 433 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 ENOX2Q16206 610 aaKnown RBP15.68■□□□□ 0.1
LINC00339-208ENST00000634934 TMEM240Q5SV17 173 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 MRPL10Q7Z7H8 261 aaKnown RBP15.68■□□□□ 0.1
LINC00339-208ENST00000634934 IRF2BP1Q8IU81 584 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 TDHQ8IZJ6 230 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 CCDC127Q96BQ5 260 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 PGBD4Q96DM1 585 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 KLK14Q9P0G3 267 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 ARMCX3Q9UH62 379 aaPredicted RBP15.68■□□□□ 0.1
LINC00339-208ENST00000634934 LRFN2Q9ULH4 789 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 PAXBP1Q9Y5B6 917 aa15.68■□□□□ 0.1
LINC00339-208ENST00000634934 MEIS3P2A8K0S8 358 aa15.67■□□□□ 0.1
LINC00339-208ENST00000634934 ZBBXA8MT70 800 aa15.67■□□□□ 0.1
LINC00339-208ENST00000634934 EFCAB14O75071 495 aa15.67■□□□□ 0.1
LINC00339-208ENST00000634934 TUBB4AP04350 444 aa15.67■□□□□ 0.1
LINC00339-208ENST00000634934 MTIF2P46199 727 aaKnown RBP15.67■□□□□ 0.1
LINC00339-208ENST00000634934 FAM189BP81408 668 aa15.67■□□□□ 0.1
LINC00339-208ENST00000634934 CDKAL1Q5VV42 579 aa15.67■□□□□ 0.1
LINC00339-208ENST00000634934 PSRC1Q6PGN9 363 aaPredicted RBP15.67■□□□□ 0.1
LINC00339-208ENST00000634934 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.67■□□□□ 0.1
LINC00339-208ENST00000634934 FRMD5Q7Z6J6 570 aa15.67■□□□□ 0.1
LINC00339-208ENST00000634934 BRSK2Q8IWQ3 736 aa15.67■□□□□ 0.1
LINC00339-208ENST00000634934 HSD3B7Q9H2F3 369 aa15.67■□□□□ 0.1
LINC00339-208ENST00000634934 METTL14Q9HCE5 456 aaKnown RBP15.67■□□□□ 0.1
LINC00339-208ENST00000634934 TOPORSQ9NS56 1045 aaPredicted RBP15.67■□□□□ 0.1
LINC00339-208ENST00000634934 PCDHB7Q9Y5E2 793 aa15.67■□□□□ 0.1
LINC00339-208ENST00000634934 MAPK13O15264 365 aa15.66■□□□□ 0.1
LINC00339-208ENST00000634934 BAIAP3O94812 1187 aa15.66■□□□□ 0.1
LINC00339-208ENST00000634934 EOMESO95936 686 aa15.66■□□□□ 0.1
LINC00339-208ENST00000634934 ATP1A3P13637 1013 aa15.66■□□□□ 0.1
LINC00339-208ENST00000634934 ATF7P17544 494 aaPredicted RBP15.66■□□□□ 0.1
LINC00339-208ENST00000634934 PPP2R3AQ06190 1150 aa15.66■□□□□ 0.1
LINC00339-208ENST00000634934 SLC10A6Q3KNW5 377 aa15.66■□□□□ 0.1
LINC00339-208ENST00000634934 TCP11X2Q5H9J9 407 aa15.66■□□□□ 0.1
LINC00339-208ENST00000634934 TCERG1LQ5VWI1 586 aa15.66■□□□□ 0.1
LINC00339-208ENST00000634934 INTS8Q75QN2 995 aaKnown RBP15.66■□□□□ 0.1
LINC00339-208ENST00000634934 CCDC186Q7Z3E2 898 aa15.66■□□□□ 0.1
LINC00339-208ENST00000634934 ZNF598Q86UK7 904 aaKnown RBP15.66■□□□□ 0.1
LINC00339-208ENST00000634934 MFSD14AQ96MC6 490 aa15.66■□□□□ 0.1
LINC00339-208ENST00000634934 PDE11AQ9HCR9 933 aa15.66■□□□□ 0.1
LINC00339-208ENST00000634934 TMEM161AQ9NX61 479 aa15.66■□□□□ 0.1
LINC00339-208ENST00000634934 CXXC1Q9P0U4 656 aaPredicted RBP15.66■□□□□ 0.1
LINC00339-208ENST00000634934 LACTBL1A8MY62 500 aa15.65■□□□□ 0.1
LINC00339-208ENST00000634934 KIF2AO00139 706 aaPredicted RBP15.65■□□□□ 0.1
LINC00339-208ENST00000634934 UPP2O95045 317 aa15.65■□□□□ 0.1
LINC00339-208ENST00000634934 IL18RAPO95256 599 aa15.65■□□□□ 0.1
LINC00339-208ENST00000634934 AMHP03971 560 aa15.65■□□□□ 0.1
LINC00339-208ENST00000634934 DLATP10515 647 aaKnown RBP15.65■□□□□ 0.1
LINC00339-208ENST00000634934 ZNF18P17022 549 aa15.65■□□□□ 0.1
LINC00339-208ENST00000634934 EEF1GP26641 437 aaKnown RBP15.65■□□□□ 0.1
LINC00339-208ENST00000634934 VAMP7P51809 220 aa15.65■□□□□ 0.1
LINC00339-208ENST00000634934 WDR5P61964 334 aaKnown RBP15.65■□□□□ 0.1
LINC00339-208ENST00000634934 SPAG1Q07617 926 aa15.65■□□□□ 0.1
LINC00339-208ENST00000634934 BFSP1Q12934 665 aa15.65■□□□□ 0.1
LINC00339-208ENST00000634934 PSMD6Q15008 389 aa15.65■□□□□ 0.1
LINC00339-208ENST00000634934 DCAF17Q5H9S7 520 aaPredicted RBP15.65■□□□□ 0.1
LINC00339-208ENST00000634934 AGMOQ6ZNB7 445 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms