RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 FAM78AQ5JUQ0 283 aa13.3□□□□□ -0.28
CHD2-218ENST00000629346 TCEAL6Q6IPX3 200 aa13.3□□□□□ -0.28
CHD2-218ENST00000629346 SYNE3Q6ZMZ3 975 aa13.3□□□□□ -0.28
CHD2-218ENST00000629346 KBTBD6Q86V97 674 aa13.3□□□□□ -0.28
CHD2-218ENST00000629346 GATA6Q92908 595 aa13.3□□□□□ -0.28
CHD2-218ENST00000629346 TCEAL3Q969E4 200 aa13.3□□□□□ -0.28
CHD2-218ENST00000629346 MTA3Q9BTC8 594 aa13.3□□□□□ -0.28
CHD2-218ENST00000629346 SCNM1Q9BWG6 230 aa13.3□□□□□ -0.28
CHD2-218ENST00000629346 TEKT3Q9BXF9 490 aa13.3□□□□□ -0.28
CHD2-218ENST00000629346 BMP2KQ9NSY1 1161 aaPredicted RBP13.3□□□□□ -0.28
CHD2-218ENST00000629346 WASF3Q9UPY6 502 aa13.3□□□□□ -0.28
CHD2-218ENST00000629346 SF3B1O75533 1304 aaKnown RBP eCLIP13.3□□□□□ -0.28
CHD2-218ENST00000629346 LAMA1P25391 3075 aa13.3□□□□□ -0.28
CHD2-218ENST00000629346 FLNBO75369 2602 aaKnown RBP13.29□□□□□ -0.28
CHD2-218ENST00000629346 TDRD15B5MCY1 1934 aaKnown RBP13.29□□□□□ -0.28
CHD2-218ENST00000629346 GREB1Q4ZG55 1949 aa13.29□□□□□ -0.28
CHD2-218ENST00000629346 TAF4O00268 1085 aa13.29□□□□□ -0.28
CHD2-218ENST00000629346 NPEPPSP55786 919 aa13.29□□□□□ -0.28
CHD2-218ENST00000629346 LAMTOR4Q0VGL1 99 aa13.29□□□□□ -0.28
CHD2-218ENST00000629346 PTGDRQ13258 359 aa13.29□□□□□ -0.28
CHD2-218ENST00000629346 UVSSAQ2YD98 709 aa13.29□□□□□ -0.28
CHD2-218ENST00000629346 ANO5Q75V66 913 aa13.29□□□□□ -0.28
CHD2-218ENST00000629346 MAP4K3Q8IVH8 894 aa13.29□□□□□ -0.28
CHD2-218ENST00000629346 GSTCDQ8NEC7 633 aa13.29□□□□□ -0.28
CHD2-218ENST00000629346 PIK3R5Q8WYR1 880 aa13.29□□□□□ -0.28
CHD2-218ENST00000629346 CCDC136Q96JN2 1154 aa13.29□□□□□ -0.28
CHD2-218ENST00000629346 RIT2Q99578 217 aa13.29□□□□□ -0.28
CHD2-218ENST00000629346 JPH2Q9BR39 696 aaPredicted RBP13.29□□□□□ -0.28
CHD2-218ENST00000629346 TRIM6Q9C030 488 aaPredicted RBP13.29□□□□□ -0.28
CHD2-218ENST00000629346 NXF3Q9H4D5 531 aaKnown RBP13.29□□□□□ -0.28
CHD2-218ENST00000629346 RBM8AQ9Y5S9 174 aaKnown RBP13.29□□□□□ -0.28
CHD2-218ENST00000629346 DMXL2Q8TDJ6 3036 aa13.29□□□□□ -0.28
CHD2-218ENST00000629346 CASTOR2A6NHX0 329 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 C4orf47A7E2U8 309 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 hCG_1984214I3L0E3 225 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 RPP40O75818 363 aaKnown RBP13.28□□□□□ -0.28
CHD2-218ENST00000629346 EPN2O95208 641 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 POU2F2P09086 479 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 PTPN2P17706 415 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 PSMC3P17980 439 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 CIITAP33076 1130 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 VIPR2P41587 438 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 FUT2Q10981 343 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 RAB33AQ14088 237 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 LRRC32Q14392 662 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 SH3PXD2AQ5TCZ1 1133 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 NOTUMQ6P988 496 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 VITQ6UXI7 678 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 CACNA2D4Q7Z3S7 1137 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 WDR5BQ86VZ2 330 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 REXO1Q8N1G1 1221 aaKnown RBP13.28□□□□□ -0.28
CHD2-218ENST00000629346 ZNF713Q8N859 430 aaPredicted RBP13.28□□□□□ -0.28
CHD2-218ENST00000629346 ZNF579Q8NAF0 562 aaKnown RBP13.28□□□□□ -0.28
CHD2-218ENST00000629346 RNF149Q8NC42 400 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 PSPC1Q8WXF1 523 aaKnown RBP13.28□□□□□ -0.28
CHD2-218ENST00000629346 SLC5A5Q92911 643 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 TCEAL4Q96EI5 215 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 KIF12Q96FN5 646 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 LOXL4Q96JB6 756 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 CORO1BQ9BR76 489 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 CSRNP2Q9H175 543 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 RBM28Q9NW13 759 aaKnown RBP13.28□□□□□ -0.28
CHD2-218ENST00000629346 PARP2Q9UGN5 583 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 GIT1Q9Y2X7 761 aa13.28□□□□□ -0.28
CHD2-218ENST00000629346 TICRRQ7Z2Z1 1910 aa13.27□□□□□ -0.28
CHD2-218ENST00000629346 ZNF263O14978 683 aa13.27□□□□□ -0.29
CHD2-218ENST00000629346 TSPAN1O60635 241 aa13.27□□□□□ -0.29
CHD2-218ENST00000629346 KIF4AO95239 1232 aa13.27□□□□□ -0.29
CHD2-218ENST00000629346 PAPSS2O95340 614 aaPredicted RBP13.27□□□□□ -0.29
CHD2-218ENST00000629346 CCDC192P0DO97 292 aa13.27□□□□□ -0.29
CHD2-218ENST00000629346 MPLP40238 635 aa13.27□□□□□ -0.29
CHD2-218ENST00000629346 RAP1GAPP47736 663 aa13.27□□□□□ -0.29
CHD2-218ENST00000629346 SOX9P48436 509 aa13.27□□□□□ -0.29
CHD2-218ENST00000629346 GRIK3Q13003 919 aa13.27□□□□□ -0.29
CHD2-218ENST00000629346 RTN1Q16799 776 aa13.27□□□□□ -0.29
CHD2-218ENST00000629346 PLA2G2CQ5R387 149 aa13.27□□□□□ -0.29
CHD2-218ENST00000629346 KIAA1211LQ6NV74 962 aa13.27□□□□□ -0.29
CHD2-218ENST00000629346 CDR2LQ86X02 465 aaPredicted RBP13.27□□□□□ -0.29
CHD2-218ENST00000629346 HACE1Q8IYU2 909 aa13.27□□□□□ -0.29
CHD2-218ENST00000629346 GAB3Q8WWW8 586 aa13.27□□□□□ -0.29
CHD2-218ENST00000629346 SLC7A3Q8WY07 619 aa13.27□□□□□ -0.29
CHD2-218ENST00000629346 ZSWIM3Q96MP5 696 aa13.27□□□□□ -0.29
CHD2-218ENST00000629346 EDEM2Q9BV94 578 aa13.27□□□□□ -0.29
CHD2-218ENST00000629346 C6orf50Q9HD87 102 aa13.27□□□□□ -0.29
CHD2-218ENST00000629346 SLC38A8A6NNN8 435 aa13.26□□□□□ -0.29
CHD2-218ENST00000629346 KPNA1P52294 538 aaPredicted RBP13.26□□□□□ -0.29
CHD2-218ENST00000629346 NCBP1Q09161 790 aaKnown RBP13.26□□□□□ -0.29
CHD2-218ENST00000629346 SOWAHCQ53LP3 525 aaPredicted RBP13.26□□□□□ -0.29
CHD2-218ENST00000629346 WDR44Q5JSH3 913 aa13.26□□□□□ -0.29
CHD2-218ENST00000629346 APOA5Q6Q788 366 aa13.26□□□□□ -0.29
CHD2-218ENST00000629346 TTC8Q8TAM2 541 aa13.26□□□□□ -0.29
CHD2-218ENST00000629346 CSGALNACT1Q8TDX6 532 aa13.26□□□□□ -0.29
CHD2-218ENST00000629346 ASB16Q96NS5 453 aa13.26□□□□□ -0.29
CHD2-218ENST00000629346 TRPV5Q9NQA5 729 aa13.26□□□□□ -0.29
CHD2-218ENST00000629346 VPS45Q9NRW7 570 aa13.26□□□□□ -0.29
CHD2-218ENST00000629346 CDY1Q9Y6F8 540 aa13.26□□□□□ -0.29
CHD2-218ENST00000629346 WDR27A2RRH5 827 aa13.25□□□□□ -0.29
CHD2-218ENST00000629346 INO80B-WBP1J3KQ70 363 aa13.25□□□□□ -0.29
CHD2-218ENST00000629346 EDIL3O43854 480 aa13.25□□□□□ -0.29
CHD2-218ENST00000629346 EXTL3O43909 919 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms