RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 ZBED2Q9BTP6 218 aa12.54□□□□□ -0.4
PTPN7-219ENST00000629151 SRRTQ9BXP5 876 aaKnown RBP12.54□□□□□ -0.4
PTPN7-219ENST00000629151 CNTN3Q9P232 1028 aa12.54□□□□□ -0.4
PTPN7-219ENST00000629151 ARMCX3Q9UH62 379 aaPredicted RBP12.54□□□□□ -0.4
PTPN7-219ENST00000629151 C2CD2Q9Y426 696 aa12.54□□□□□ -0.4
PTPN7-219ENST00000629151 TRIM49BA6NDI0 452 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 ARL5CA6NH57 179 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 AKAP3O75969 853 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 THP07101 528 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 CYP3A5P20815 502 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 AKAP5P24588 427 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 GTF2H1P32780 548 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 MARSP56192 900 aaKnown RBP12.53□□□□□ -0.4
PTPN7-219ENST00000629151 HTRA4P83105 476 aaPredicted RBP12.53□□□□□ -0.4
PTPN7-219ENST00000629151 CYP24A1Q07973 514 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 GRIK3Q13003 919 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 ENOX2Q16206 610 aaKnown RBP12.53□□□□□ -0.4
PTPN7-219ENST00000629151 LRRC55Q6ZSA7 311 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 CBWD2Q8IUF1 395 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 CMTR2Q8IYT2 770 aaKnown RBP12.53□□□□□ -0.4
PTPN7-219ENST00000629151 TDHQ8IZJ6 230 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 RDH13Q8NBN7 331 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 FAM200AQ8TCP9 573 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 DDX27Q96GQ7 796 aaKnown RBP12.53□□□□□ -0.4
PTPN7-219ENST00000629151 YME1L1Q96TA2 773 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 GAD1Q99259 594 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 APOL6Q9BWW8 343 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 RNF39Q9H2S5 420 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 IKZF4Q9H2S9 585 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 CXXC1Q9P0U4 656 aaPredicted RBP12.53□□□□□ -0.4
PTPN7-219ENST00000629151 NFE2L3Q9Y4A8 694 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 HES2Q9Y543 173 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 TANC1Q9C0D5 1861 aa12.53□□□□□ -0.4
PTPN7-219ENST00000629151 SMIM28A0A1B0GU29 152 aa12.52□□□□□ -0.41
PTPN7-219ENST00000629151 GOLGA8IPA6NC78 632 aa12.52□□□□□ -0.41
PTPN7-219ENST00000629151 GOLGA8JA6NMD2 632 aa12.52□□□□□ -0.41
PTPN7-219ENST00000629151 GOLGA6L19H0YKK7 550 aa12.52□□□□□ -0.41
PTPN7-219ENST00000629151 UPP2O95045 317 aa12.52□□□□□ -0.41
PTPN7-219ENST00000629151 TPM2P07951 284 aa12.52□□□□□ -0.41
PTPN7-219ENST00000629151 CXCL8P10145 99 aa12.52□□□□□ -0.41
PTPN7-219ENST00000629151 EEF1GP26641 437 aaKnown RBP12.52□□□□□ -0.41
PTPN7-219ENST00000629151 VAMP7P51809 220 aa12.52□□□□□ -0.41
PTPN7-219ENST00000629151 CLDN10P78369 228 aa12.52□□□□□ -0.41
PTPN7-219ENST00000629151 DEFB103AP81534 67 aa12.52□□□□□ -0.41
PTPN7-219ENST00000629151 DUOXA2Q1HG44 320 aa12.52□□□□□ -0.41
PTPN7-219ENST00000629151 CCDC40Q4G0X9 1142 aa12.52□□□□□ -0.41
PTPN7-219ENST00000629151 C11orf57Q6ZUT1 292 aaPredicted RBP12.52□□□□□ -0.41
PTPN7-219ENST00000629151 WDR49Q8IV35 697 aa12.52□□□□□ -0.41
PTPN7-219ENST00000629151 LRRC43Q8N309 656 aa12.52□□□□□ -0.41
PTPN7-219ENST00000629151 CEP120Q8N960 986 aa12.52□□□□□ -0.41
PTPN7-219ENST00000629151 ZNF689Q96CS4 500 aaPredicted RBP12.52□□□□□ -0.41
PTPN7-219ENST00000629151 UROC1Q96N76 676 aa12.52□□□□□ -0.41
PTPN7-219ENST00000629151 CASD1Q96PB1 797 aa12.52□□□□□ -0.41
PTPN7-219ENST00000629151 FAM193BQ96PV7 902 aaPredicted RBP12.52□□□□□ -0.41
PTPN7-219ENST00000629151 AAASQ9NRG9 546 aa12.52□□□□□ -0.41
PTPN7-219ENST00000629151 UBQLN1Q9UMX0 589 aaKnown RBP12.52□□□□□ -0.41
PTPN7-219ENST00000629151 R3HCC1Q9Y3T6 440 aaKnown RBP12.52□□□□□ -0.41
PTPN7-219ENST00000629151 RWDD3Q9Y3V2 267 aa12.52□□□□□ -0.41
PTPN7-219ENST00000629151 TBKBP1A7MCY6 615 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 LACTBL1A8MY62 500 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 TLL1O43897 1013 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 TNNC2P02585 160 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 FGFR1P11362 822 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 RPL9P32969 192 aaKnown RBP12.51□□□□□ -0.41
PTPN7-219ENST00000629151 MLH1P40692 756 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 TNFSF9P41273 254 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 CASP4P49662 377 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 RNASELQ05823 741 aaKnown RBP12.51□□□□□ -0.41
PTPN7-219ENST00000629151 CETN1Q12798 172 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 BFSP1Q12934 665 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 BTG3Q14201 252 aaPredicted RBP12.51□□□□□ -0.41
PTPN7-219ENST00000629151 TMEM132DQ14C87 1099 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 RAB30Q15771 203 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 ZBTB6Q15916 424 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 SEZ6Q53EL9 994 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 CLLU1OSQ5K130 101 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 ZBTB41Q5SVQ8 909 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 C9orf50Q5SZB4 431 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 PRPF38BQ5VTL8 546 aaKnown RBP12.51□□□□□ -0.41
PTPN7-219ENST00000629151 BEST2Q8NFU1 509 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 HELQQ8TDG4 1101 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 PARD3BQ8TEW8 1205 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 LPPQ93052 612 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 FAM212AQ96EL1 285 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 KIF12Q96FN5 646 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 BORCS6Q96GS4 357 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 MED15Q96RN5 788 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 TMEM175Q9BSA9 504 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 STK39Q9UEW8 545 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 PCDHA11Q9Y5I1 949 aa12.51□□□□□ -0.41
PTPN7-219ENST00000629151 PMM2O15305 246 aa12.5□□□□□ -0.41
PTPN7-219ENST00000629151 P4HA2O15460 535 aa12.5□□□□□ -0.41
PTPN7-219ENST00000629151 N4BP1O75113 896 aaKnown RBP12.5□□□□□ -0.41
PTPN7-219ENST00000629151 ALDH2P05091 517 aa12.5□□□□□ -0.41
PTPN7-219ENST00000629151 TMEM191BP0C7N4 346 aa12.5□□□□□ -0.41
PTPN7-219ENST00000629151 TNNI1P19237 187 aa12.5□□□□□ -0.41
PTPN7-219ENST00000629151 CDK11BP21127 795 aaKnown RBP12.5□□□□□ -0.41
PTPN7-219ENST00000629151 IBSPP21815 317 aaPredicted RBP12.5□□□□□ -0.41
PTPN7-219ENST00000629151 TUSC3Q13454 348 aa12.5□□□□□ -0.41
PTPN7-219ENST00000629151 TMEM192Q8IY95 271 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms