RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 SMC1AQ14683 1233 aaKnown RBP8.5□□□□□ -1.05
NR1I3-235ENST00000628566 SURF1Q15526 300 aa8.5□□□□□ -1.05
NR1I3-235ENST00000628566 KIAA1841Q6NSI8 718 aa8.5□□□□□ -1.05
NR1I3-235ENST00000628566 ARMCX5Q6P1M9 558 aa8.5□□□□□ -1.05
NR1I3-235ENST00000628566 PDXDC1Q6P996 788 aa8.5□□□□□ -1.05
NR1I3-235ENST00000628566 ELMSAN1Q6PJG2 1045 aa8.5□□□□□ -1.05
NR1I3-235ENST00000628566 DDX53Q86TM3 631 aaKnown RBP8.5□□□□□ -1.05
NR1I3-235ENST00000628566 SPPL3Q8TCT6 385 aa8.5□□□□□ -1.05
NR1I3-235ENST00000628566 PPM1EQ8WY54 764 aa8.5□□□□□ -1.05
NR1I3-235ENST00000628566 IGSF21Q96ID5 467 aa8.5□□□□□ -1.05
NR1I3-235ENST00000628566 CHAMP1Q96JM3 812 aa8.5□□□□□ -1.05
NR1I3-235ENST00000628566 ZBTB45Q96K62 511 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-235ENST00000628566 SNX27Q96L92 541 aa8.5□□□□□ -1.05
NR1I3-235ENST00000628566 FIZ1Q96SL8 496 aa8.5□□□□□ -1.05
NR1I3-235ENST00000628566 CDCA3Q99618 268 aaPredicted RBP8.5□□□□□ -1.05
NR1I3-235ENST00000628566 TCF25Q9BQ70 676 aa8.5□□□□□ -1.05
NR1I3-235ENST00000628566 ASB7Q9H672 318 aa8.5□□□□□ -1.05
NR1I3-235ENST00000628566 COG5Q9UP83 839 aa8.5□□□□□ -1.05
NR1I3-235ENST00000628566 TCHHQ07283 1943 aa8.5□□□□□ -1.05
NR1I3-235ENST00000628566 COL4A4P53420 1690 aaPredicted RBP8.49□□□□□ -1.05
NR1I3-235ENST00000628566 CHD9Q3L8U1 2897 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 SMIM28A0A1B0GU29 152 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 ARHGEF37A1IGU5 675 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 NT5C1B-RDH14C9J2C7 533 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 TULP1O00294 542 aaPredicted RBP8.49□□□□□ -1.05
NR1I3-235ENST00000628566 CALUO43852 315 aaPredicted RBP8.49□□□□□ -1.05
NR1I3-235ENST00000628566 EXTL3O43909 919 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 DDHD2O94830 711 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 PRPF6O94906 941 aaKnown RBP8.49□□□□□ -1.05
NR1I3-235ENST00000628566 EDN1P05305 212 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 URODP06132 367 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 LINC00271P0C7V0 271 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 RPL9P32969 192 aaKnown RBP8.49□□□□□ -1.05
NR1I3-235ENST00000628566 PPP1R2P41236 205 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 SLC11A1P49279 550 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 DSC1Q08554 894 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 STIM1Q13586 685 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 KCNB1Q14721 858 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 CCDC85BQ15834 202 aaPredicted RBP8.49□□□□□ -1.05
NR1I3-235ENST00000628566 KNOP1Q1ED39 458 aaKnown RBP8.49□□□□□ -1.05
NR1I3-235ENST00000628566 KMT5BQ4FZB7 885 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 SPRED2Q7Z698 418 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 USP37Q86T82 979 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 NT5DC4Q86YG4 428 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 ZNF280BQ86YH2 543 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 ELOA2Q8IYF1 753 aaPredicted RBP8.49□□□□□ -1.05
NR1I3-235ENST00000628566 COLGALT2Q8IYK4 626 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 GRAMD1CQ8IYS0 662 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 FMR1NBQ8N0W7 255 aaPredicted RBP8.49□□□□□ -1.05
NR1I3-235ENST00000628566 BEST2Q8NFU1 509 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 ZNF507Q8TCN5 953 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 NOC3LQ8WTT2 800 aaKnown RBP8.49□□□□□ -1.05
NR1I3-235ENST00000628566 CACTINQ8WUQ7 758 aaKnown RBP8.49□□□□□ -1.05
NR1I3-235ENST00000628566 SMARCE1Q969G3 411 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 FAM212AQ96EL1 285 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 GSDMAQ96QA5 445 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 STRA6Q9BX79 667 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 EMILIN2Q9BXX0 1053 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 GOLPH3LQ9H4A5 285 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 TLE6Q9H808 572 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 SLC39A2Q9NP94 309 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 MRPL17Q9NRX2 175 aaKnown RBP8.49□□□□□ -1.05
NR1I3-235ENST00000628566 CNTN3Q9P232 1028 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 DNAJB4Q9UDY4 337 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 DPP7Q9UHL4 492 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 ADAM28Q9UKQ2 775 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 UBQLN1Q9UMX0 589 aaKnown RBP8.49□□□□□ -1.05
NR1I3-235ENST00000628566 FAM50BQ9Y247 325 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 PRG3Q9Y2Y8 225 aaPredicted RBP8.49□□□□□ -1.05
NR1I3-235ENST00000628566 DERAQ9Y315 318 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 NUB1Q9Y5A7 615 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 STYXL1Q9Y6J8 313 aa8.49□□□□□ -1.05
NR1I3-235ENST00000628566 TDRD15B5MCY1 1934 aaKnown RBP8.48□□□□□ -1.05
NR1I3-235ENST00000628566 KIAA1671Q9BY89 1806 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 ZNF233A6NK53 670 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 ABLIM1O14639 778 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 PTGESO14684 152 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 PRPF40AO75400 957 aaKnown RBP8.48□□□□□ -1.05
NR1I3-235ENST00000628566 B3GAT3O94766 335 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 RHOBTB3O94955 611 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 CSPG5O95196 566 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 SOD2P04179 222 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 CXCL8P10145 99 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 CYP3A5P20815 502 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 RPL13P26373 211 aaKnown RBP8.48□□□□□ -1.05
NR1I3-235ENST00000628566 PBX3P40426 434 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 CASP5P51878 434 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 DPYDQ12882 1025 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 TMEM132DQ14C87 1099 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 BMT2Q1RMZ1 405 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 USP41Q3LFD5 358 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 XKR4Q5GH76 650 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 GLRA4Q5JXX5 417 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 PLPP4Q5VZY2 271 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 DCLRE1AQ6PJP8 1040 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 EP400NLQ6ZTU2 488 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 PPFIBP1Q86W92 1011 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 NELFCDQ8IXH7 590 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 GPR65Q8IYL9 337 aa8.48□□□□□ -1.05
NR1I3-235ENST00000628566 VPS52Q8N1B4 723 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms