RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 ABHD14A-ACY1A0A1B0GW23 586 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 GOLGA8IPA6NC78 632 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 GOLGA8JA6NMD2 632 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 RBAK-RBAKDNI3L0D1 243 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 ABLIM1O14639 778 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 HNRNPDLO14979 420 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 ARHGAP6O43182 974 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 TLL1O43897 1013 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 SELPP16109 830 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 SLC9A1P19634 815 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 KLRC1P26715 233 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 PON1P27169 355 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 WNT7BP56706 349 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 IGBP1P78318 339 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 CNKSR3Q6P9H4 555 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 TOGARAM2Q6ZUX3 1019 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 CCAR2Q8N163 923 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 RNF149Q8NC42 400 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 ARNTL2Q8WYA1 636 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 FAM122AQ96E09 287 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 ZNF668Q96K58 619 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 ZBTB45Q96K62 511 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 PHF12Q96QT6 1004 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 ZBED2Q9BTP6 218 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 NAA15Q9BXJ9 866 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 MMRN2Q9H8L6 949 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 MINDY3Q9H8M7 445 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 IFT122Q9HBG6 1241 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 SUCLA2Q9P2R7 463 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 AJAP1Q9UKB5 411 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 LUC7L2Q9Y383 392 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 NCOR1O75376 2440 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 EYSQ5T1H1 3165 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 K7ERI5 159 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 HAS3O00219 553 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 FAM189A1O60320 539 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 LRRN2O75325 713 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 GARTP22102 1010 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 HNRNPH3P31942 346 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 FMO5P49326 533 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 ADAM17P78536 824 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 ZBED6P86452 979 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 PPP3CAQ08209 521 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 GRIK4Q16099 956 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 SNRNP35Q16560 246 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 TSR1Q2NL82 804 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 MTHFD1LQ6UB35 978 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 CRELD2Q6UXH1 353 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 INTS8Q75QN2 995 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 RHPN2Q8IUC4 686 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 ZNF397Q8NF99 534 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 OR8K1Q8NGG5 319 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 LMO3Q8TAP4 145 aa10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 TARS2Q9BW92 718 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-223ENST00000627587 SCN5AQ14524 2016 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 A0A0U1RQJ8 604 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 GTPBP10A4D1E9 387 aaKnown RBP10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 RFXAPO00287 272 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 MAGEB2O15479 319 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 CXCL10P02778 98 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 SRGAP2CP0DJJ0 459 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 KRT13P13646 458 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 PLA2G5P39877 138 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 LIG4P49917 911 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 EFNA5P52803 228 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 PTK7Q13308 1070 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 IKBKEQ14164 716 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 TFDP1Q14186 410 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 ZBTB41Q5SVQ8 909 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 LRRC8DQ7L1W4 858 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 ZBTB8OSQ8IWT0 167 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 REXO1L1PQ8IX06 675 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 METTL13Q8N6R0 699 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 C7orf31Q8N865 590 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 NEK11Q8NG66 645 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 LMBR1Q8WVP7 490 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 ATRIPQ8WXE1 791 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 POMGNT1Q8WZA1 660 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 MFSD14AQ96MC6 490 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 RAD9AQ99638 391 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 LSM14BQ9BX40 385 aaKnown RBP10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 CERS4Q9HA82 394 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 PLCB1Q9NQ66 1216 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 PLAGL2Q9UPG8 496 aa10.31□□□□□ -0.76
PDLIM5-223ENST00000627587 TRIP11Q15643 1979 aa10.3□□□□□ -0.76
PDLIM5-223ENST00000627587 TANC1Q9C0D5 1861 aa10.3□□□□□ -0.76
PDLIM5-223ENST00000627587 A0A0B4J269 797 aa10.3□□□□□ -0.76
PDLIM5-223ENST00000627587 LRRC53A6NM62 1247 aa10.3□□□□□ -0.76
PDLIM5-223ENST00000627587 ASAP2O43150 1006 aa10.3□□□□□ -0.76
PDLIM5-223ENST00000627587 TMOD1P28289 359 aa10.3□□□□□ -0.76
PDLIM5-223ENST00000627587 VAMP7P51809 220 aa10.3□□□□□ -0.76
PDLIM5-223ENST00000627587 PTENP60484 403 aa10.3□□□□□ -0.76
PDLIM5-223ENST00000627587 TFF2Q03403 129 aa10.3□□□□□ -0.76
PDLIM5-223ENST00000627587 MBTD1Q05BQ5 628 aa10.3□□□□□ -0.76
PDLIM5-223ENST00000627587 PPFIA1Q13136 1202 aa10.3□□□□□ -0.76
PDLIM5-223ENST00000627587 EXOC3L4Q17RC7 722 aa10.3□□□□□ -0.76
PDLIM5-223ENST00000627587 KLHDC7AQ5VTJ3 777 aa10.3□□□□□ -0.76
PDLIM5-223ENST00000627587 GDF6Q6KF10 455 aaPredicted RBP10.3□□□□□ -0.76
PDLIM5-223ENST00000627587 NYAP1Q6ZVC0 841 aa10.3□□□□□ -0.76
PDLIM5-223ENST00000627587 KIAA0319LQ8IZA0 1049 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms