RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 SUSD6Q92537 303 aa24.47■■□□□ 1.51
SF1-220ENST00000626028 ACAP3Q96P50 834 aa24.47■■□□□ 1.51
SF1-220ENST00000626028 PPP1R10Q96QC0 940 aaKnown RBP24.47■■□□□ 1.51
SF1-220ENST00000626028 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.47■■□□□ 1.51
SF1-220ENST00000626028 CFAP45Q9UL16 551 aa24.47■■□□□ 1.51
SF1-220ENST00000626028 TBX20Q9UMR3 447 aa24.47■■□□□ 1.51
SF1-220ENST00000626028 VWA8A3KMH1 1905 aa24.47■■□□□ 1.51
SF1-220ENST00000626028 TCHHQ07283 1943 aa24.47■■□□□ 1.51
SF1-220ENST00000626028 PLXNA3P51805 1871 aa24.47■■□□□ 1.51
SF1-220ENST00000626028 C19orf67A6NJJ6 358 aa24.46■■□□□ 1.51
SF1-220ENST00000626028 TMEM189-UBE2V1I3L0A0 370 aa24.46■■□□□ 1.51
SF1-220ENST00000626028 CUTAO60888 179 aa24.46■■□□□ 1.51
SF1-220ENST00000626028 TADA2AO75478 443 aa24.46■■□□□ 1.51
SF1-220ENST00000626028 STAT6P42226 847 aa24.46■■□□□ 1.51
SF1-220ENST00000626028 USP41Q3LFD5 358 aa24.46■■□□□ 1.51
SF1-220ENST00000626028 KIAA0319Q5VV43 1072 aa24.46■■□□□ 1.51
SF1-220ENST00000626028 KIAA1841Q6NSI8 718 aa24.46■■□□□ 1.51
SF1-220ENST00000626028 SLC22A17Q8WUG5 538 aa24.46■■□□□ 1.51
SF1-220ENST00000626028 S1PR5Q9H228 398 aa24.46■■□□□ 1.51
SF1-220ENST00000626028 CUEDC2Q9H467 287 aa24.46■■□□□ 1.51
SF1-220ENST00000626028 DPP7Q9UHL4 492 aa24.46■■□□□ 1.51
SF1-220ENST00000626028 USP15Q9Y4E8 981 aaPredicted RBP24.46■■□□□ 1.51
SF1-220ENST00000626028 K7ENM7 598 aa24.45■■□□□ 1.5
SF1-220ENST00000626028 ADH1AP07327 375 aa24.45■■□□□ 1.5
SF1-220ENST00000626028 KCNE1P15382 129 aa24.45■■□□□ 1.5
SF1-220ENST00000626028 GTF2BQ00403 316 aa24.45■■□□□ 1.5
SF1-220ENST00000626028 SYCE2Q6PIF2 218 aa24.45■■□□□ 1.5
SF1-220ENST00000626028 AUTS2Q8WXX7 1259 aa24.45■■□□□ 1.5
SF1-220ENST00000626028 HVCN1Q96D96 273 aa24.45■■□□□ 1.5
SF1-220ENST00000626028 DDX27Q96GQ7 796 aaKnown RBP24.45■■□□□ 1.5
SF1-220ENST00000626028 TSPAN18Q96SJ8 248 aa24.45■■□□□ 1.5
SF1-220ENST00000626028 RXFP1Q9HBX9 757 aa24.45■■□□□ 1.5
SF1-220ENST00000626028 TFIP11Q9UBB9 837 aaKnown RBP24.45■■□□□ 1.5
SF1-220ENST00000626028 SMIM28A0A1B0GU29 152 aa24.44■■□□□ 1.5
SF1-220ENST00000626028 CNPP09543 421 aaKnown RBP24.44■■□□□ 1.5
SF1-220ENST00000626028 GAP43P17677 238 aa24.44■■□□□ 1.5
SF1-220ENST00000626028 RBM10P98175 930 aaKnown RBP24.44■■□□□ 1.5
SF1-220ENST00000626028 CES5AQ6NT32 575 aa24.44■■□□□ 1.5
SF1-220ENST00000626028 LLGL2Q6P1M3 1020 aa24.44■■□□□ 1.5
SF1-220ENST00000626028 PDXDC1Q6P996 788 aa24.44■■□□□ 1.5
SF1-220ENST00000626028 ELMSAN1Q6PJG2 1045 aa24.44■■□□□ 1.5
SF1-220ENST00000626028 ZBTB33Q86T24 672 aa24.44■■□□□ 1.5
SF1-220ENST00000626028 DDX12PQ92771 950 aa24.44■■□□□ 1.5
SF1-220ENST00000626028 BICD1Q96G01 975 aa24.44■■□□□ 1.5
SF1-220ENST00000626028 SNX27Q96L92 541 aa24.44■■□□□ 1.5
SF1-220ENST00000626028 NECTIN4Q96NY8 510 aa24.44■■□□□ 1.5
SF1-220ENST00000626028 KLHL5Q96PQ7 755 aa24.44■■□□□ 1.5
SF1-220ENST00000626028 FIZ1Q96SL8 496 aa24.44■■□□□ 1.5
SF1-220ENST00000626028 LRRC27Q9C0I9 530 aa24.44■■□□□ 1.5
SF1-220ENST00000626028 PLEKHA5Q9HAU0 1116 aa24.44■■□□□ 1.5
SF1-220ENST00000626028 CNTN3Q9P232 1028 aa24.44■■□□□ 1.5
SF1-220ENST00000626028 FNIP2Q9P278 1114 aa24.44■■□□□ 1.5
SF1-220ENST00000626028 ANKFY1Q9P2R3 1169 aa24.44■■□□□ 1.5
SF1-220ENST00000626028 ANK1P16157 1881 aa24.43■■□□□ 1.5
SF1-220ENST00000626028 HNRNPDLO14979 420 aaKnown RBP24.43■■□□□ 1.5
SF1-220ENST00000626028 KLRC2P26717 231 aa24.43■■□□□ 1.5
SF1-220ENST00000626028 LIG4P49917 911 aa24.43■■□□□ 1.5
SF1-220ENST00000626028 CLCN4P51793 760 aa24.43■■□□□ 1.5
SF1-220ENST00000626028 DCLRE1AQ6PJP8 1040 aa24.43■■□□□ 1.5
SF1-220ENST00000626028 CEP120Q8N960 986 aa24.43■■□□□ 1.5
SF1-220ENST00000626028 GPR62Q9BZJ7 368 aa24.43■■□□□ 1.5
SF1-220ENST00000626028 ADAM7Q9H2U9 754 aa24.43■■□□□ 1.5
SF1-220ENST00000626028 ZHX3Q9H4I2 956 aa24.43■■□□□ 1.5
SF1-220ENST00000626028 C2orf16Q68DN1 1984 aa24.42■■□□□ 1.5
SF1-220ENST00000626028 CASTOR2A6NHX0 329 aa24.42■■□□□ 1.5
SF1-220ENST00000626028 CLTAP09496 248 aa24.42■■□□□ 1.5
SF1-220ENST00000626028 SSTR3P32745 418 aaPredicted RBP24.42■■□□□ 1.5
SF1-220ENST00000626028 CBX2Q14781 532 aaPredicted RBP24.42■■□□□ 1.5
SF1-220ENST00000626028 TAS1R1Q7RTX1 841 aa24.42■■□□□ 1.5
SF1-220ENST00000626028 MAP4K3Q8IVH8 894 aa24.42■■□□□ 1.5
SF1-220ENST00000626028 HDAC7Q8WUI4 952 aa24.42■■□□□ 1.5
SF1-220ENST00000626028 DNAJC19Q96DA6 116 aa24.42■■□□□ 1.5
SF1-220ENST00000626028 PHF7Q9BWX1 381 aaPredicted RBP24.42■■□□□ 1.5
SF1-220ENST00000626028 TNMDQ9H2S6 317 aa24.42■■□□□ 1.5
SF1-220ENST00000626028 OLFML3Q9NRN5 406 aa24.42■■□□□ 1.5
SF1-220ENST00000626028 DENND4AQ7Z401 1863 aa24.42■■□□□ 1.5
SF1-220ENST00000626028 MYMKA6NI61 221 aa24.41■■□□□ 1.5
SF1-220ENST00000626028 TRAPPC3O43617 180 aa24.41■■□□□ 1.5
SF1-220ENST00000626028 KIF4AO95239 1232 aa24.41■■□□□ 1.5
SF1-220ENST00000626028 RPL9P32969 192 aaKnown RBP24.41■■□□□ 1.5
SF1-220ENST00000626028 ALCAMQ13740 583 aa24.41■■□□□ 1.5
SF1-220ENST00000626028 UPP1Q16831 310 aa24.41■■□□□ 1.5
SF1-220ENST00000626028 SLFN12LQ6IEE8 588 aa24.41■■□□□ 1.5
SF1-220ENST00000626028 ZNF720Q7Z2F6 126 aa24.41■■□□□ 1.5
SF1-220ENST00000626028 ZBTB45Q96K62 511 aaPredicted RBP24.41■■□□□ 1.5
SF1-220ENST00000626028 PAAF1Q9BRP4 392 aa24.41■■□□□ 1.5
SF1-220ENST00000626028 C1QTNF1Q9BXJ1 281 aa24.41■■□□□ 1.5
SF1-220ENST00000626028 CXCL16Q9H2A7 254 aa24.41■■□□□ 1.5
SF1-220ENST00000626028 CD320Q9NPF0 282 aa24.41■■□□□ 1.5
SF1-220ENST00000626028 A0A087X0B3 334 aa24.4■■□□□ 1.5
SF1-220ENST00000626028 F8W810 466 aa24.4■■□□□ 1.5
SF1-220ENST00000626028 C2CD2LO14523 706 aa24.4■■□□□ 1.5
SF1-220ENST00000626028 TEX28O15482 410 aa24.4■■□□□ 1.5
SF1-220ENST00000626028 MTHFRP42898 656 aa24.4■■□□□ 1.5
SF1-220ENST00000626028 MATR3P43243 847 aaKnown RBP eCLIP24.4■■□□□ 1.5
SF1-220ENST00000626028 OSTNP61366 133 aa24.4■■□□□ 1.5
SF1-220ENST00000626028 AMPD3Q01432 767 aa24.4■■□□□ 1.5
SF1-220ENST00000626028 POU5F1Q01860 360 aaKnown RBP24.4■■□□□ 1.5
SF1-220ENST00000626028 GLRA4Q5JXX5 417 aa24.4■■□□□ 1.5
SF1-220ENST00000626028 CYP26C1Q6V0L0 522 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms