RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 COL23A1Q86Y22 540 aaPredicted RBP4.26□□□□□ -1.73
CDKL5-208ENST00000624953 PASD1Q8IV76 773 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 UNC5BQ8IZJ1 945 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 Q8TCH9 128 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 RABGGTAQ92696 567 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 ERCC4Q92889 916 aaPredicted RBP4.26□□□□□ -1.73
CDKL5-208ENST00000624953 TUBGCP5Q96RT8 1024 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 AGO3Q9H9G7 860 aaKnown RBP4.26□□□□□ -1.73
CDKL5-208ENST00000624953 MSRAQ9UJ68 235 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 TJP1Q07157 1748 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 RAB3GAP2Q9H2M9 1393 aa4.26□□□□□ -1.73
CDKL5-208ENST00000624953 TTC21BQ7Z4L5 1316 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.25□□□□□ -1.73
CDKL5-208ENST00000624953 A0A1W2PR48 441 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 PRSS38A1L453 326 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 K7ESM1 405 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 EXOC5O00471 708 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 ULK1O75385 1050 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 CR2P20023 1033 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 IL2P60568 153 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 ERVK-21P61565 698 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 ATP13A4Q4VNC1 1196 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 PRAMEF9Q5VWM5 478 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 MAMDC4Q6UXC1 1216 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 ESPNLQ6ZVH7 1005 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 SMIM5Q71RC9 77 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 CIR1Q86X95 450 aaPredicted RBP4.25□□□□□ -1.73
CDKL5-208ENST00000624953 UBR7Q8N806 425 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 LMBR1Q8WVP7 490 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 RSAD2Q8WXG1 361 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 RPGRQ92834 1020 aaKnown RBP4.25□□□□□ -1.73
CDKL5-208ENST00000624953 EDAQ92838 391 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 GFM2Q969S9 779 aaKnown RBP4.25□□□□□ -1.73
CDKL5-208ENST00000624953 TTC1Q99614 292 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 SLKQ9H2G2 1235 aaPredicted RBP4.25□□□□□ -1.73
CDKL5-208ENST00000624953 VTA1Q9NP79 307 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 TOPORSQ9NS56 1045 aaPredicted RBP4.25□□□□□ -1.73
CDKL5-208ENST00000624953 NRXN2Q9P2S2 1712 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 SAE1Q9UBE0 346 aaPredicted RBP4.25□□□□□ -1.73
CDKL5-208ENST00000624953 ANKRD36BQ8N2N9 1353 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 ARFGEF2Q9Y6D5 1785 aa4.25□□□□□ -1.73
CDKL5-208ENST00000624953 PXDNLA1KZ92 1463 aa4.24□□□□□ -1.73
CDKL5-208ENST00000624953 COL11A2P13942 1736 aaPredicted RBP4.24□□□□□ -1.73
CDKL5-208ENST00000624953 SLC26A4O43511 780 aa4.24□□□□□ -1.73
CDKL5-208ENST00000624953 KDM1AO60341 852 aa4.24□□□□□ -1.73
CDKL5-208ENST00000624953 INSRRP14616 1297 aa4.24□□□□□ -1.73
CDKL5-208ENST00000624953 RAC3P60763 192 aa4.24□□□□□ -1.73
CDKL5-208ENST00000624953 PLP2Q04941 152 aa4.24□□□□□ -1.73
CDKL5-208ENST00000624953 TRIM25Q14258 630 aaKnown RBP4.24□□□□□ -1.73
CDKL5-208ENST00000624953 FSCN1Q16658 493 aaKnown RBP4.24□□□□□ -1.73
CDKL5-208ENST00000624953 PITRM1Q5JRX3 1037 aa4.24□□□□□ -1.73
CDKL5-208ENST00000624953 TIGD7Q6NT04 549 aaPredicted RBP4.24□□□□□ -1.73
CDKL5-208ENST00000624953 ZNF662Q6ZS27 426 aa4.24□□□□□ -1.73
CDKL5-208ENST00000624953 KCNK18Q7Z418 384 aa4.24□□□□□ -1.73
CDKL5-208ENST00000624953 PIK3C3Q8NEB9 887 aa4.24□□□□□ -1.73
CDKL5-208ENST00000624953 SLC7A6OSQ96CW6 309 aaPredicted RBP4.24□□□□□ -1.73
CDKL5-208ENST00000624953 DYDC2Q96IM9 177 aa4.24□□□□□ -1.73
CDKL5-208ENST00000624953 LMF1Q96S06 567 aa4.24□□□□□ -1.73
CDKL5-208ENST00000624953 GPHA2Q96T91 129 aa4.24□□□□□ -1.73
CDKL5-208ENST00000624953 SLC6A15Q9H2J7 730 aa4.24□□□□□ -1.73
CDKL5-208ENST00000624953 SCOCQ9UIL1 159 aa4.24□□□□□ -1.73
CDKL5-208ENST00000624953 NR2E1Q9Y466 385 aa4.24□□□□□ -1.73
CDKL5-208ENST00000624953 TESMINQ9Y4I5 508 aa4.24□□□□□ -1.73
CDKL5-208ENST00000624953 SCN11AQ9UI33 1791 aa4.24□□□□□ -1.73
CDKL5-208ENST00000624953 CENPJQ9HC77 1338 aaPredicted RBP4.23□□□□□ -1.73
CDKL5-208ENST00000624953 KCPQ6ZWJ8 1503 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 NPEPPSL1A6NEC2 478 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 TMEM127O75204 238 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 H2AFYO75367 372 aaKnown RBP4.23□□□□□ -1.73
CDKL5-208ENST00000624953 GAAP10253 952 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 IL2RBP14784 551 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 ZNF20P17024 532 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 RRADP55042 308 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 AMPD3Q01432 767 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 STRN3Q13033 797 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 ADAM15Q13444 863 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 PUM1Q14671 1186 aaKnown RBP eCLIP4.23□□□□□ -1.73
CDKL5-208ENST00000624953 ZXDCQ2QGD7 858 aaPredicted RBP4.23□□□□□ -1.73
CDKL5-208ENST00000624953 ERICH6BQ5W0A0 696 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 HTR3DQ70Z44 454 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 C11orf74Q86VG3 221 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 FUKQ8N0W3 1084 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 CDYL2Q8N8U2 506 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 USP7Q93009 1102 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 WDR92Q96MX6 357 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 GNRHR2Q96P88 292 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 DPYSL5Q9BPU6 564 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 PLA2G12BQ9BX93 195 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 BRINP2Q9C0B6 783 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 NELFAQ9H3P2 528 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 SMPD4Q9NXE4 827 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 PRSS50Q9UI38 385 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 TSC22D4Q9Y3Q8 395 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 PCDHB6Q9Y5E3 794 aa4.23□□□□□ -1.73
CDKL5-208ENST00000624953 IGSF1Q8N6C5 1336 aa4.22□□□□□ -1.73
CDKL5-208ENST00000624953 TRIM75PA6NK02 468 aa4.22□□□□□ -1.73
CDKL5-208ENST00000624953 ZNF623O75123 536 aa4.22□□□□□ -1.73
CDKL5-208ENST00000624953 PRKD3O94806 890 aa4.22□□□□□ -1.73
CDKL5-208ENST00000624953 VSIG10L2P0DP72 767 aa4.22□□□□□ -1.73
CDKL5-208ENST00000624953 ENPP1P22413 925 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms