RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 CCDC105Q8IYK2 499 aa10.27□□□□□ -0.77
TARDBP-227ENST00000622057 PIK3R5Q8WYR1 880 aa10.27□□□□□ -0.77
TARDBP-227ENST00000622057 NKD2Q969F2 451 aaPredicted RBP10.27□□□□□ -0.77
TARDBP-227ENST00000622057 RPP25Q9BUL9 199 aaKnown RBP10.27□□□□□ -0.77
TARDBP-227ENST00000622057 BHMT2Q9H2M3 363 aa10.27□□□□□ -0.77
TARDBP-227ENST00000622057 FOXP1Q9H334 677 aaPredicted RBP10.27□□□□□ -0.77
TARDBP-227ENST00000622057 KIAA1024Q9UPX6 916 aa10.27□□□□□ -0.77
TARDBP-227ENST00000622057 NUMBLQ9Y6R0 609 aa10.27□□□□□ -0.77
TARDBP-227ENST00000622057 PRR23AA6NEV1 266 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 CCDC169A6NNP5 214 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 K7ERI5 159 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 CCL16O15467 120 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 ADAM12O43184 909 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 B3GAT3O94766 335 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 DCNP07585 359 aaKnown RBP10.26□□□□□ -0.77
TARDBP-227ENST00000622057 MUTP22033 750 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 IGFBP6P24592 240 aaPredicted RBP10.26□□□□□ -0.77
TARDBP-227ENST00000622057 OR1D2P34982 312 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 RBM25P49756 843 aaKnown RBP10.26□□□□□ -0.77
TARDBP-227ENST00000622057 CLCNKBP51801 687 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 PEX3P56589 373 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 OSTNP61366 133 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 ELAVL2Q12926 359 aaKnown RBP10.26□□□□□ -0.77
TARDBP-227ENST00000622057 ORC2Q13416 577 aaPredicted RBP10.26□□□□□ -0.77
TARDBP-227ENST00000622057 NAB2Q15742 525 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 DCAF4L1Q3SXM0 396 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 NT5DC1Q5TFE4 455 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 ATF7IP2Q5U623 682 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 DCLRE1AQ6PJP8 1040 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 PARM1Q6UWI2 310 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 FBXO18Q8NFZ0 1043 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 KIFAP3Q92845 792 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 LLPHQ9BRT6 129 aaKnown RBP10.26□□□□□ -0.77
TARDBP-227ENST00000622057 CCDC113Q9H0I3 377 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 TBC1D17Q9HA65 648 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 DDX19AQ9NUU7 478 aaKnown RBP10.26□□□□□ -0.77
TARDBP-227ENST00000622057 LRWD1Q9UFC0 647 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 FBXW11Q9UKB1 542 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 NOL7Q9UMY1 257 aaKnown RBP10.26□□□□□ -0.77
TARDBP-227ENST00000622057 ZMYM2Q9UBW7 1377 aa10.26□□□□□ -0.77
TARDBP-227ENST00000622057 ANHXE9PGG2 379 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 E9PMD0 336 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 PAPLNO95428 1278 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 HNRNPA1P09651 372 aaKnown RBP eCLIP10.25□□□□□ -0.77
TARDBP-227ENST00000622057 FXR2P51116 673 aaKnown RBP eCLIP10.25□□□□□ -0.772e-7■■□□□ 11.5
TARDBP-227ENST00000622057 EFNA5P52803 228 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 GPC5P78333 572 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 HMGN5P82970 282 aaKnown RBP10.25□□□□□ -0.77
TARDBP-227ENST00000622057 HTR4Q13639 388 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 AXDND1Q5T1B0 1012 aaPredicted RBP10.25□□□□□ -0.77
TARDBP-227ENST00000622057 PDXDC1Q6P996 788 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.25□□□□□ -0.77
TARDBP-227ENST00000622057 ADSSL1Q8N142 457 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 C4orf32Q8N8J7 132 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 SLC7A14Q8TBB6 771 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 KCNG4Q8TDN1 519 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 SNX29Q8TEQ0 813 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 FGF14Q92915 247 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 ZSCAN31Q96LW9 406 aaPredicted RBP10.25□□□□□ -0.77
TARDBP-227ENST00000622057 GOLGA2P5Q9HBQ8 144 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 CDH7Q9ULB5 785 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 DNM3Q9UQ16 869 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 TNFSF13BQ9Y275 285 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 SIT1Q9Y3P8 196 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 CDY1Q9Y6F8 540 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 ZFP37Q9Y6Q3 630 aaPredicted RBP10.25□□□□□ -0.77
TARDBP-227ENST00000622057 DMDP11532 3685 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 MYO15AQ9UKN7 3530 aa10.25□□□□□ -0.77
TARDBP-227ENST00000622057 I3L4J1 428 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 TRAPPC3O43617 180 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 XYLBO75191 536 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 FGFR3P22607 806 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 TKTP29401 623 aaKnown RBP10.24□□□□□ -0.77
TARDBP-227ENST00000622057 CDC25AP30304 524 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 BRCC3P46736 316 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 TRAPPC10P48553 1259 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 YARSP54577 528 aaKnown RBP10.24□□□□□ -0.77
TARDBP-227ENST00000622057 PTGDRQ13258 359 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 SNW1Q13573 536 aaKnown RBP10.24□□□□□ -0.77
TARDBP-227ENST00000622057 RAB33AQ14088 237 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 PDIA5Q14554 519 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 ZRSR1Q15695 479 aaKnown RBP10.24□□□□□ -0.77
TARDBP-227ENST00000622057 UPP1Q16831 310 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 UVSSAQ2YD98 709 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 RSPO2Q6UXX9 243 aaPredicted RBP10.24□□□□□ -0.77
TARDBP-227ENST00000622057 APBB1IPQ7Z5R6 666 aaPredicted RBP10.24□□□□□ -0.77
TARDBP-227ENST00000622057 CEP120Q8N960 986 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 ITFG1Q8TB96 612 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 FGF13Q92913 245 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 UROC1Q96N76 676 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 PPP1R10Q96QC0 940 aaKnown RBP10.24□□□□□ -0.77
TARDBP-227ENST00000622057 TCHPQ9BT92 498 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 CCDC94Q9BW85 323 aaPredicted RBP10.24□□□□□ -0.77
TARDBP-227ENST00000622057 RAB34Q9BZG1 259 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 KMT5AQ9NQR1 393 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 ARHGEF3Q9NR81 526 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 HCFC1R1Q9NWW0 138 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 DNMT3BQ9UBC3 853 aaKnown RBP10.24□□□□□ -0.77
TARDBP-227ENST00000622057 PCDHB6Q9Y5E3 794 aa10.24□□□□□ -0.77
TARDBP-227ENST00000622057 STK24Q9Y6E0 443 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms