RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 UTRNP46939 3433 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 TMEM150BA6NC51 233 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 HNRNPDLO14979 420 aaKnown RBP12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 PSEN1P49768 467 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 LIN9Q5TKA1 542 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 CCDC89Q8N998 374 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 PARD3BQ8TEW8 1205 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 CENPTQ96BT3 561 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 TCHPQ9BT92 498 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 CDCA7Q9BWT1 371 aaPredicted RBP12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 TRIM4Q9C037 500 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 GYG2O15488 501 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 TTC4O95801 387 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 SMARCA1P28370 1054 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 HOXA7P31268 230 aaPredicted RBP12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 MARSP56192 900 aaKnown RBP12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 SLC8A3P57103 927 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 RHBDL3P58872 404 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 IRX1P78414 480 aaPredicted RBP12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 BBS9Q3SYG4 887 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 PALM2Q8IXS6 379 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 RILPQ96NA2 401 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 GBP5Q96PP8 586 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 SYNCQ9H7C4 482 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 GPRC5CQ9NQ84 441 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 TOPORSQ9NS56 1045 aaPredicted RBP12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 TMOD2Q9NZR1 351 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 PCDHA2Q9Y5H9 948 aa12.13□□□□□ -0.47
PCDHGA11-203ENST00000622044 KRT10P13645 584 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 ANXA13P27216 316 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 NOP14P78316 857 aaKnown RBP12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 PIGWQ7Z7B1 504 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 CFAP57Q96MR6 1250 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 SERPINB12Q96P63 405 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 ACCSQ96QU6 501 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 RAB20Q9NX57 234 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 SLC12A4Q9UP95 1085 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 STXBP5LQ9Y2K9 1186 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 DCTN3O75935 186 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 NDUFB10O96000 172 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 KRT1P04264 644 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 HOXD13P35453 343 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 IRX4P78413 519 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 PPP3CAQ08209 521 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 SLFN11Q7Z7L1 901 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 NOP9Q86U38 636 aaKnown RBP12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 ZFPM1Q8IX07 1006 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 HIPK4Q8NE63 616 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 MAIP1Q8WWC4 291 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 TRAIPQ9BWF2 469 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 ROPN1BQ9BZX4 212 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 ROPN1Q9HAT0 212 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 GINM1Q9NU53 330 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 HSPBP1Q9NZL4 362 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 ALS2Q96Q42 1657 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 TESPA1A2RU30 521 aaPredicted RBP12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 RPS6KA4O75676 772 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 AP1G2O75843 785 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 KITP10721 976 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 ITIH2P19823 946 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 PRELPP51888 382 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 PDIA2Q13087 525 aaKnown RBP12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 SMAD1Q15797 465 aaKnown RBP12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 BTNL9Q6UXG8 535 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 USP37Q86T82 979 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 ZNF570Q96NI8 536 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 KCNMB3Q9NPA1 279 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 ZFATQ9P243 1243 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 CNOT7Q9UIV1 285 aaKnown RBP12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 USH1CQ9Y6N9 552 aa12.12□□□□□ -0.47
PCDHGA11-203ENST00000622044 GJB6O95452 261 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 MAGEA4P43358 317 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 ARSEP51690 589 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 LRRC36Q1X8D7 754 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 CFAP157Q5JU67 520 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 ZNF720Q7Z2F6 126 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 CBWD2Q8IUF1 395 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 DNAJC9Q8WXX5 260 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 CCDC17Q96LX7 622 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 NINJ2Q9NZG7 142 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 ADAM22Q9P0K1 906 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 SCOCQ9UIL1 159 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 ARHGAP42A6NI28 874 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 TCP10L2B9ZVM9 353 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 IPO5O00410 1097 aaKnown RBP12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 SERPINB2P05120 415 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 ESRRAP11474 423 aaPredicted RBP12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 TAF1BQ53T94 588 aaPredicted RBP12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 SLC30A9Q6PML9 568 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 LVRNQ6Q4G3 990 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 CYP4X1Q8N118 509 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 ATL2Q8NHH9 583 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 TTC8Q8TAM2 541 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 TBC1D16Q8TBP0 767 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 GJD4Q96KN9 370 aaPredicted RBP12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 TTC1Q99614 292 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 POLLQ9UGP5 575 aa12.11□□□□□ -0.47
PCDHGA11-203ENST00000622044 ZSCAN5DPP0CG00 497 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms