RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 CDCA5Q96FF9 252 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 RIT2Q99578 217 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 AGPAT1Q99943 283 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 EDEM3Q9BZQ6 932 aa9.69□□□□□ -0.86
GGA3-222ENST00000621217 MYH7P12883 1935 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 TARSL2A2RTX5 802 aaKnown RBP9.68□□□□□ -0.86
GGA3-222ENST00000621217 PI4K2BG5E9Z4 385 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 MYL3P08590 195 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 SNHG28P0DPA3 235 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 KRT15P19012 456 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 GPC5P78333 572 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 LRRC14Q15048 493 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 ZNF564Q8TBZ8 553 aaPredicted RBP9.68□□□□□ -0.86
GGA3-222ENST00000621217 RFFLQ8WZ73 363 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 COPS5Q92905 334 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 KLC4Q9NSK0 619 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 TAS2R14Q9NYV8 317 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 COL20A1Q9P218 1284 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 GGT7Q9UJ14 662 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 RAB21Q9UL25 225 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 PLCH1Q4KWH8 1693 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 SNED1Q8TER0 1413 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 SGPL1O95470 568 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 RANBP1P43487 201 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 CLCN3P51790 818 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 TTLL4Q14679 1199 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 TMEM132BQ14DG7 1078 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 SYCP2LQ5T4T6 812 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 WDR93Q6P2C0 686 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 ZNF354CQ86Y25 554 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 TPCN2Q8NHX9 752 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 GDAP1Q8TB36 358 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 MRIQ9BWK5 157 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 STK33Q9BYT3 514 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 KCNMB3Q9NPA1 279 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 ALG6Q9Y672 507 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 GLI3P10071 1580 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 CASZ1Q86V15 1759 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 CICQ96RK0 1608 aaPredicted RBP9.68□□□□□ -0.86
GGA3-222ENST00000621217 GAS8O95995 478 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 COG7P83436 770 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 ZBTB17Q13105 803 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 SNRNP35Q16560 246 aaKnown RBP9.68□□□□□ -0.86
GGA3-222ENST00000621217 C10orf76Q5T2E6 689 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 CCDC62Q6P9F0 684 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 CATSPER4Q7RTX7 472 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 ERO1BQ86YB8 467 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 WHAMMQ8TF30 809 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 SPATC1LQ9H0A9 340 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 AP5M1Q9H0R1 490 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 SLC38A10Q9HBR0 1119 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 RBAKQ9NYW8 714 aaPredicted RBP9.68□□□□□ -0.86
GGA3-222ENST00000621217 AGO2Q9UKV8 859 aaKnown RBP9.68□□□□□ -0.86
GGA3-222ENST00000621217 TJP1Q07157 1748 aa9.68□□□□□ -0.86
GGA3-222ENST00000621217 RASSF10A6NK89 507 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 TXNDC9O14530 226 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 CASQ2O14958 399 aaPredicted RBP9.67□□□□□ -0.86
GGA3-222ENST00000621217 SUN1O94901 812 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 DSG3P32926 999 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 SNAPC2Q13487 334 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 PDE1CQ14123 709 aaPredicted RBP9.67□□□□□ -0.86
GGA3-222ENST00000621217 FBXW10Q5XX13 1052 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 FASTKD5Q7L8L6 764 aaKnown RBP9.67□□□□□ -0.86
GGA3-222ENST00000621217 ZNF720Q7Z2F6 126 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 CCDC125Q86Z20 511 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 SEPT1Q8WYJ6 367 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 ASCC2Q9H1I8 757 aaPredicted RBP9.67□□□□□ -0.86
GGA3-222ENST00000621217 VIPAS39Q9H9C1 493 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 SLC5A4Q9NY91 659 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 LCMT1Q9UIC8 334 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 USH1CQ9Y6N9 552 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 CRYBG1Q9Y4K1 1723 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 MYH3P11055 1940 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 GOLGA8MH3BSY2 632 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 DDX3XO00571 662 aaKnown RBP eCLIP9.67□□□□□ -0.861e-12■■□□□ 12.3
GGA3-222ENST00000621217 OPHN1O60890 802 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 CTSHP09668 335 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 DYNC1I2Q13409 638 aaKnown RBP9.67□□□□□ -0.86
GGA3-222ENST00000621217 EMC2Q15006 297 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 MMGT1Q8N4V1 131 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 C7orf43Q8WVR3 580 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 SPIRE2Q8WWL2 714 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 ACSF2Q96CM8 615 aaPredicted RBP9.67□□□□□ -0.86
GGA3-222ENST00000621217 AGO4Q9HCK5 861 aaKnown RBP9.67□□□□□ -0.86
GGA3-222ENST00000621217 FAF1Q9UNN5 650 aaPredicted RBP9.67□□□□□ -0.86
GGA3-222ENST00000621217 XIRP1Q702N8 1843 aaKnown RBP9.67□□□□□ -0.86
GGA3-222ENST00000621217 DNAJC8O75937 253 aaPredicted RBP9.67□□□□□ -0.86
GGA3-222ENST00000621217 COMTP21964 271 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 RARRES1P49788 294 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 IRAK1P51617 712 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 FKBP1AP62942 108 aaKnown RBP9.67□□□□□ -0.86
GGA3-222ENST00000621217 HSP90AA5PQ58FG0 334 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 XKR3Q5GH77 459 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 CCDC137Q6PK04 289 aaKnown RBP9.67□□□□□ -0.86
GGA3-222ENST00000621217 MDM1Q8TC05 714 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.67□□□□□ -0.86
GGA3-222ENST00000621217 ZBTB10Q96DT7 871 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 POLR3CQ9BUI4 534 aaPredicted RBP9.67□□□□□ -0.86
GGA3-222ENST00000621217 BTAF1O14981 1849 aa9.67□□□□□ -0.86
GGA3-222ENST00000621217 TNPO2O14787 897 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms