RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 CELF4Q9BZC1 486 aaKnown RBP8.82□□□□□ -1
PTPDC1-204ENST00000620992 CHORDC1Q9UHD1 332 aaPredicted RBP8.82□□□□□ -1
PTPDC1-204ENST00000620992 FEM1BQ9UK73 627 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 PCDHAC2Q9Y5I4 1007 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 HMBSP08397 361 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 IRF2BP2Q7Z5L9 587 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 FRMD5Q7Z6J6 570 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 RREB1Q92766 1687 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 PBKQ96KB5 322 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 KIFC3Q9BVG8 833 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 ATP8A1Q9Y2Q0 1164 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 SUGT1Q9Y2Z0 365 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 PPME1Q9Y570 386 aa8.82□□□□□ -1
PTPDC1-204ENST00000620992 TYW5A2RUC4 315 aaKnown RBP8.81□□□□□ -1
PTPDC1-204ENST00000620992 GOLGA8MH3BSY2 632 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 KRT1P04264 644 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 ZNF211Q13398 564 aaPredicted RBP8.81□□□□□ -1
PTPDC1-204ENST00000620992 NAA25Q14CX7 972 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 ZC2HC1CQ53FD0 456 aaPredicted RBP8.81□□□□□ -1
PTPDC1-204ENST00000620992 C10orf76Q5T2E6 689 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 MFSD14CQ5VZR4 134 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 KCTD6Q8NC69 237 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 OR6J1Q8NGC5 347 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 RBM46Q8TBY0 533 aaKnown RBP8.81□□□□□ -1
PTPDC1-204ENST00000620992 RNF25Q96BH1 459 aaPredicted RBP8.81□□□□□ -1
PTPDC1-204ENST00000620992 THOC1Q96FV9 657 aaKnown RBP8.81□□□□□ -1
PTPDC1-204ENST00000620992 RUSC1Q9BVN2 902 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 TMEM106CQ9BVX2 250 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 GLIS2Q9BZE0 524 aaPredicted RBP8.81□□□□□ -1
PTPDC1-204ENST00000620992 POLR3FQ9H1D9 316 aaPredicted RBP8.81□□□□□ -1
PTPDC1-204ENST00000620992 KCNMB3Q9NPA1 279 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 MAST2Q6P0Q8 1798 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 FAM86B1E9PN63 330 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 TTI1O43156 1089 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 CREB3O43889 395 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 FAM86B2P0C5J1 330 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 HOXA7P31268 230 aaPredicted RBP8.81□□□□□ -1
PTPDC1-204ENST00000620992 STX2P32856 288 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 NME3Q13232 169 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 GKAP1Q5VSY0 366 aaPredicted RBP8.81□□□□□ -1
PTPDC1-204ENST00000620992 ATP6V1E2Q96A05 226 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 PPP1R12CQ9BZL4 782 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 OSGEPQ9NPF4 335 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 LRRC4BQ9NT99 713 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 RNF19AQ9NV58 838 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 ASXL3Q9C0F0 2248 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 PITPNM2Q9BZ72 1349 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 IGKV6D-41A0A0C4DH26 115 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 A6NNZ2 444 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 GRIN3BO60391 1043 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 HUS1O60921 280 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 GMNNO75496 209 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 PPP1R37O75864 691 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 FGGP02679 453 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 GAP43P17677 238 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 TNFRSF8P28908 595 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 HSD17B3P37058 310 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 PRELPP51888 382 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 IFT88Q13099 833 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 TUBB8Q3ZCM7 444 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 ERICH1Q86X53 443 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 MAP7D3Q8IWC1 876 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 XXYLT1Q8NBI6 393 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 SPDYE1Q8NFV5 336 aaPredicted RBP8.81□□□□□ -1
PTPDC1-204ENST00000620992 TPCN2Q8NHX9 752 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 KIF12Q96FN5 646 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 EIF2AK1Q9BQI3 630 aaKnown RBP8.81□□□□□ -1
PTPDC1-204ENST00000620992 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.81□□□□□ -1
PTPDC1-204ENST00000620992 TMEM206Q9H813 350 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 ATP6V0A4Q9HBG4 840 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 TYW1Q9NV66 732 aaKnown RBP8.81□□□□□ -1
PTPDC1-204ENST00000620992 HERC5Q9UII4 1024 aaKnown RBP8.81□□□□□ -1
PTPDC1-204ENST00000620992 FBXL5Q9UKA1 691 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 DNAJC12Q9UKB3 198 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 DDX60LQ5H9U9 1706 aaKnown RBP8.81□□□□□ -1
PTPDC1-204ENST00000620992 GRAP2O75791 330 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 RPA1P27694 616 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 ARL4AP40617 200 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 NEDD9Q14511 834 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 ZNF699Q32M78 642 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 GLRA4Q5JXX5 417 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 HYIQ5T013 277 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 DARS2Q6PI48 645 aaKnown RBP8.81□□□□□ -1
PTPDC1-204ENST00000620992 SYT2Q8N9I0 419 aaPredicted RBP8.81□□□□□ -1
PTPDC1-204ENST00000620992 DCAF4Q8WV16 495 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 ISCUQ9H1K1 167 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 EFCC1Q9HA90 598 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 ADAM22Q9P0K1 906 aa8.81□□□□□ -1
PTPDC1-204ENST00000620992 AJAP1Q9UKB5 411 aaPredicted RBP8.81□□□□□ -1
PTPDC1-204ENST00000620992 SPTBN2O15020 2390 aa8.8□□□□□ -1
PTPDC1-204ENST00000620992 HMGB1P1B2RPK0 211 aaPredicted RBP8.8□□□□□ -1
PTPDC1-204ENST00000620992 PDXKO00764 312 aa8.8□□□□□ -1
PTPDC1-204ENST00000620992 MEIS2O14770 477 aa8.8□□□□□ -1
PTPDC1-204ENST00000620992 ZBTB39O15060 712 aa8.8□□□□□ -1
PTPDC1-204ENST00000620992 EVI5O60447 810 aa8.8□□□□□ -1
PTPDC1-204ENST00000620992 ALDH3A1P30838 453 aa8.8□□□□□ -1
PTPDC1-204ENST00000620992 GALCP54803 685 aa8.8□□□□□ -1
PTPDC1-204ENST00000620992 SKOR1P84550 965 aa8.8□□□□□ -1
PTPDC1-204ENST00000620992 DHX9Q08211 1270 aaKnown RBP8.8□□□□□ -1
PTPDC1-204ENST00000620992 EPC2Q52LR7 807 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms