RNA–Protein interactions for RNA: ENST00000620879.4

GTF2I-218, Transcript of general transcription factor IIi, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GTF2I, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-218ENST00000620879 RAPH1Q70E73 1250 aa13.05□□□□□ -0.32
GTF2I-218ENST00000620879 GLT1D1Q96MS3 346 aa13.05□□□□□ -0.32
GTF2I-218ENST00000620879 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.05□□□□□ -0.327e-24■□□□□ 9.6
GTF2I-218ENST00000620879 SAYSD1Q9NPB0 183 aa13.05□□□□□ -0.32
GTF2I-218ENST00000620879 PRG3Q9Y2Y8 225 aaPredicted RBP13.05□□□□□ -0.32
GTF2I-218ENST00000620879 PCDHB2Q9Y5E7 798 aa13.05□□□□□ -0.32
GTF2I-218ENST00000620879 PPP2R3BQ9Y5P8 575 aa13.05□□□□□ -0.32
GTF2I-218ENST00000620879 KIAA0391O15091 583 aaKnown RBP13.04□□□□□ -0.32
GTF2I-218ENST00000620879 EXTL3O43909 919 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 ITGB3P05106 788 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 PRPSAP1Q14558 356 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 BBS5Q8N3I7 341 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 TAS1R2Q8TE23 839 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 SKA2Q8WVK7 121 aaPredicted RBP13.04□□□□□ -0.32
GTF2I-218ENST00000620879 ARHGEF2Q92974 986 aaKnown RBP13.04□□□□□ -0.32
GTF2I-218ENST00000620879 FAF2Q96CS3 445 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 MTMR12Q9C0I1 747 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 TMEM117Q9H0C3 514 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 KLHL8Q9P2G9 620 aaPredicted RBP13.04□□□□□ -0.32
GTF2I-218ENST00000620879 ASTN2O75129 1339 aaPredicted RBP13.04□□□□□ -0.32
GTF2I-218ENST00000620879 PDGFRAP16234 1089 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 MSH2P43246 934 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 CCT5P48643 541 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 METTL7BQ6UX53 244 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 TRIM72Q6ZMU5 477 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 C4orf19Q8IY42 314 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 IL31RAQ8NI17 732 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 GTF3C2Q8WUA4 911 aaPredicted RBP13.04□□□□□ -0.32
GTF2I-218ENST00000620879 HAS1Q92839 578 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 CFAP36Q96G28 342 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 LRRC1Q9BTT6 524 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 LACRTQ9GZZ8 138 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 STAP1Q9ULZ2 295 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 ATP8B3O60423 1300 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 A0A087WZ62 844 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 PON1P27169 355 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 GTF2H1P32780 548 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 PAN2Q504Q3 1202 aaKnown RBP13.04□□□□□ -0.32
GTF2I-218ENST00000620879 CACNA2D3Q8IZS8 1091 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 UBA3Q8TBC4 463 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 WHAMMQ8TF30 809 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 FDXACB1Q9BRP7 624 aaPredicted RBP13.04□□□□□ -0.32
GTF2I-218ENST00000620879 KATNAL1Q9BW62 490 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 VPS33BQ9H267 617 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 PFDN4Q9NQP4 134 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 INSRRP14616 1297 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 VSNL1P62760 191 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 FUT2Q10981 343 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 EMBQ6PCB8 327 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 CCDC137Q6PK04 289 aaKnown RBP13.04□□□□□ -0.32
GTF2I-218ENST00000620879 URGCPQ8TCY9 931 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 TNIP3Q96KP6 325 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 KIF9Q9HAQ2 790 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 SETD4Q9NVD3 440 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 EHD2Q9NZN4 543 aa13.04□□□□□ -0.32
GTF2I-218ENST00000620879 ANKRD26Q9UPS8 1709 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 LTN1O94822 1766 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 TISP43B9A030 160 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 OGTO15294 1046 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 SART1O43290 800 aaKnown RBP13.03□□□□□ -0.32
GTF2I-218ENST00000620879 SLC26A4O43511 780 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 NAB2Q15742 525 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 GKAP1Q5VSY0 366 aaPredicted RBP13.03□□□□□ -0.32
GTF2I-218ENST00000620879 GPAT2Q6NUI2 795 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 CC2D1AQ6P1N0 951 aaPredicted RBP13.03□□□□□ -0.32
GTF2I-218ENST00000620879 C1orf228Q6PIY5 440 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 MCUR1Q96AQ8 359 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 C17orf75Q9HAS0 396 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 PARVAQ9NVD7 372 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 IP6K2Q9UHH9 426 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 PODXLO00592 558 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 TROVE2P10155 538 aaKnown RBP eCLIP13.03□□□□□ -0.32
GTF2I-218ENST00000620879 BRD2P25440 801 aaKnown RBP13.03□□□□□ -0.32
GTF2I-218ENST00000620879 ADORA2AP29274 412 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 SLMAPQ14BN4 828 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 CDKAL1Q5VV42 579 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 PCGF5Q86SE9 256 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 PPP4R1Q8TF05 950 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 MCEEQ96PE7 176 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 OSMRQ99650 979 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 MAP3K20Q9NYL2 800 aaKnown RBP13.03□□□□□ -0.32
GTF2I-218ENST00000620879 PEX10O60683 326 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 KRT7P08729 469 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 FGFR4P22455 802 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 HPDLQ96IR7 371 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 ADAM33Q9BZ11 813 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 KLHL14Q9P2G3 628 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 NAGPAQ9UK23 515 aa13.03□□□□□ -0.32
GTF2I-218ENST00000620879 TADA3O75528 432 aa13.02□□□□□ -0.32
GTF2I-218ENST00000620879 CA4P22748 312 aa13.02□□□□□ -0.32
GTF2I-218ENST00000620879 THPOP40225 353 aa13.02□□□□□ -0.32
GTF2I-218ENST00000620879 KCNJ1P48048 391 aa13.02□□□□□ -0.32
GTF2I-218ENST00000620879 SARSP49591 514 aaKnown RBP13.02□□□□□ -0.32
GTF2I-218ENST00000620879 GPS1Q13098 491 aa13.02□□□□□ -0.32
GTF2I-218ENST00000620879 PSMD6Q15008 389 aa13.02□□□□□ -0.32
GTF2I-218ENST00000620879 GJC2Q5T442 439 aaPredicted RBP13.02□□□□□ -0.32
GTF2I-218ENST00000620879 SPOPLQ6IQ16 392 aa13.02□□□□□ -0.32
GTF2I-218ENST00000620879 CCDC62Q6P9F0 684 aa13.02□□□□□ -0.32
GTF2I-218ENST00000620879 KCTD17Q8N5Z5 321 aa13.02□□□□□ -0.32
GTF2I-218ENST00000620879 NKX2-3Q8TAU0 364 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms