RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 C19orf18Q8NEA5 215 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 PDCD10Q9BUL8 212 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 OSBPL10Q9BXB5 764 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 OVOS2A0A0G2JMS6 1433 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 OVOS2A0A0J9YW53 1432 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 OVOS2Q6IE36 1432 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 AREL1O15033 823 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 CDH16O75309 829 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 VCPP55072 806 aaKnown RBP7.55□□□□□ -1.2
COLCA1-205ENST00000620864 KRT76Q01546 638 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 ITIH4Q14624 930 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 ODR4Q5SWX8 454 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 TTC23LQ6PF05 361 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 TTC33Q6PID6 262 aaPredicted RBP7.55□□□□□ -1.2
COLCA1-205ENST00000620864 LRRC69Q6ZNQ3 347 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 BBS2Q9BXC9 721 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 CDY2AQ9Y6F7 541 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 CDY1Q9Y6F8 540 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 RGS20O76081 388 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 ZNF18P17022 549 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 ITGA1P56199 1179 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 AP1S2P56377 157 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 ZNF544Q6NX49 715 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 FAM47EQ6ZV65 393 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 SH3TC2Q8TF17 1288 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 OTUD5Q96G74 571 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 ZFP42Q96MM3 310 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 LRRC4Q9HBW1 653 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 GMEB2Q9UKD1 530 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 HNRNPDLO14979 420 aaKnown RBP7.55□□□□□ -1.2
COLCA1-205ENST00000620864 TPP2P29144 1249 aaPredicted RBP7.55□□□□□ -1.2
COLCA1-205ENST00000620864 IL6STP40189 918 aaPredicted RBP7.55□□□□□ -1.2
COLCA1-205ENST00000620864 CHRNDQ07001 517 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 MMRN1Q13201 1228 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 GPATCH4Q5T3I0 446 aaKnown RBP7.55□□□□□ -1.2
COLCA1-205ENST00000620864 C4orf22Q6V702 233 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 ZNF473Q8WTR7 871 aaKnown RBP7.55□□□□□ -1.2
COLCA1-205ENST00000620864 MLPHQ9BV36 600 aaPredicted RBP7.55□□□□□ -1.2
COLCA1-205ENST00000620864 MTFR1LQ9H019 292 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 SLC39A2Q9NP94 309 aa7.55□□□□□ -1.2
COLCA1-205ENST00000620864 C6orf203Q9P0P8 240 aaPredicted RBP7.55□□□□□ -1.2
COLCA1-205ENST00000620864 HAX1O00165 279 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 KCNQ3O43525 872 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 AKAP10O43572 662 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 SRP72O76094 671 aaKnown RBP7.54□□□□□ -1.2
COLCA1-205ENST00000620864 GRK2P25098 689 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 ILF2Q12905 390 aaKnown RBP7.54□□□□□ -1.2
COLCA1-205ENST00000620864 PTGDRQ13258 359 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 NCF4Q15080 339 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 ASPRV1Q53RT3 343 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 LONP2Q86WA8 852 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 DENND6AQ8IWF6 608 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 STAMQ92783 540 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 FSD1LQ9BXM9 530 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 NFKBIL1Q9UBC1 381 aaPredicted RBP7.54□□□□□ -1.2
COLCA1-205ENST00000620864 RCOR1Q9UKL0 485 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 KCNJ14Q9UNX9 436 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 PCDHA5Q9Y5H7 936 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 C5orf58C9J3I9 102 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 ARIH2O95376 493 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 CCT8P50990 548 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 TUBA4AP68366 448 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 PPARAQ07869 468 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 RIPPLY1Q0D2K3 151 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 MFSD14CQ5VZR4 134 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 TNS3Q68CZ2 1445 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 ALKBH5Q6P6C2 394 aaKnown RBP7.54□□□□□ -1.2
COLCA1-205ENST00000620864 ENOSF1Q7L5Y1 443 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 ERICH1Q86X53 443 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 APOBEC3FQ8IUX4 373 aaKnown RBP7.54□□□□□ -1.2
COLCA1-205ENST00000620864 CYGBQ8WWM9 190 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 IL17RAQ96F46 866 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 AURKCQ9UQB9 309 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 SOWAHDA6NJG2 315 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 NEMP1O14524 444 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 ECE2O60344 883 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 KLHL41O60662 606 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 COBLO75128 1261 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 SASH1O94885 1247 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 GPC5P78333 572 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 SGSM1Q2NKQ1 1148 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 PCNX4Q63HM2 1172 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 FGD2Q7Z6J4 655 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 FRMD8Q9BZ67 464 aaPredicted RBP7.54□□□□□ -1.2
COLCA1-205ENST00000620864 NDST4Q9H3R1 872 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 TTC37Q6PGP7 1564 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 FTCDO95954 541 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 RCSD1Q6JBY9 416 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 JADE3Q92613 823 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 CCT8L2Q96SF2 557 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 MMTAG2Q9BU76 263 aaKnown RBP7.54□□□□□ -1.2
COLCA1-205ENST00000620864 FAM117AQ9C073 453 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 ERAP1Q9NZ08 941 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 NDUFB9Q9Y6M9 179 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 STON1Q9Y6Q2 735 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 JAK2O60674 1132 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 GFPT2O94808 682 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 ATP10DQ9P241 1426 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 DPEP1P16444 411 aa7.54□□□□□ -1.2
COLCA1-205ENST00000620864 RXRGP48443 463 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms