RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 ZNF516Q92618 1163 aa20.8■□□□□ 0.92
LAPTM4B-204ENST00000619747 OPTNQ96CV9 577 aa20.8■□□□□ 0.92
LAPTM4B-204ENST00000619747 HAPLN2Q9GZV7 340 aa20.8■□□□□ 0.92
LAPTM4B-204ENST00000619747 C17orf75Q9HAS0 396 aa20.8■□□□□ 0.92
LAPTM4B-204ENST00000619747 EPB41L5Q9HCM4 733 aa20.8■□□□□ 0.92
LAPTM4B-204ENST00000619747 A0A0G2JLL6 359 aaPredicted RBP20.8■□□□□ 0.92
LAPTM4B-204ENST00000619747 AGPSO00116 658 aa20.8■□□□□ 0.92
LAPTM4B-204ENST00000619747 WLSQ5T9L3 541 aa20.8■□□□□ 0.92
LAPTM4B-204ENST00000619747 PRRT2Q7Z6L0 340 aaPredicted RBP20.8■□□□□ 0.92
LAPTM4B-204ENST00000619747 NT5DC3Q86UY8 548 aa20.8■□□□□ 0.92
LAPTM4B-204ENST00000619747 USP38Q8NB14 1042 aa20.8■□□□□ 0.92
LAPTM4B-204ENST00000619747 ZNF483Q8TF39 744 aaPredicted RBP20.8■□□□□ 0.92
LAPTM4B-204ENST00000619747 RFFLQ8WZ73 363 aa20.8■□□□□ 0.92
LAPTM4B-204ENST00000619747 COPS5Q92905 334 aa20.8■□□□□ 0.92
LAPTM4B-204ENST00000619747 TMEM8AQ9HCN3 771 aa20.8■□□□□ 0.92
LAPTM4B-204ENST00000619747 CTTNBP2NLQ9P2B4 639 aa20.8■□□□□ 0.92
LAPTM4B-204ENST00000619747 RBPJLQ9UBG7 517 aa20.8■□□□□ 0.92
LAPTM4B-204ENST00000619747 FBXO40Q9UH90 709 aa20.8■□□□□ 0.92
LAPTM4B-204ENST00000619747 SBF1O95248 1867 aa20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 HEXIM1O94992 359 aaKnown RBP20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 MCM3P25205 808 aa20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 PPFIA1Q13136 1202 aa20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 CEP85LQ5SZL2 805 aa20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 SCARA3Q6AZY7 606 aa20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 SPOPLQ6IQ16 392 aa20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 PHLDB2Q86SQ0 1253 aa20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 EPS8L1Q8TE68 723 aa20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 DDX20Q9UHI6 824 aaKnown RBP20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 DNAH12Q6ZR08 3092 aa20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 ZNF233A6NK53 670 aa20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 P4HA2O15460 535 aa20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 ITGA4P13612 1032 aa20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 SSTR3P32745 418 aaPredicted RBP20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 CARSP49589 748 aaKnown RBP20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 PPATQ06203 517 aa20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 ZNF211Q13398 564 aaPredicted RBP20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 FBXO16Q8IX29 292 aaPredicted RBP20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 LRRC71Q8N4P6 559 aa20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 MFSD14AQ96MC6 490 aa20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 DHX33Q9H6R0 707 aaKnown RBP20.79■□□□□ 0.92
LAPTM4B-204ENST00000619747 NDUFAB1O14561 156 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 CNMDO75829 334 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 TMEM253P0C7T8 217 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 SRGAP2CP0DJJ0 459 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 CYP2C8P10632 490 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 ICAM3P32942 547 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 BIRC3Q13489 604 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 HELQQ8TDG4 1101 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 LMBR1Q8WVP7 490 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 NT5C1BQ96P26 610 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 FNBP1Q96RU3 617 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 DDX47Q9H0S4 455 aaKnown RBP20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 PORCNQ9H237 461 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 NFU1Q9UMS0 254 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 PTPRFP10586 1907 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 MEFVO15553 781 aaPredicted RBP20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 ATG7O95352 703 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 CHRNB2P17787 502 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 ANXA13P27216 316 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 MFAP3P55082 362 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 SNRPFP62306 86 aaKnown RBP20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 ITIH3Q06033 890 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 LLGL1Q15334 1064 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 C2CD6Q53TS8 623 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 TRAPPC12Q8WVT3 735 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 BTBD6Q96KE9 485 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 FBXL18Q96ME1 805 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 AMFRQ9UKV5 643 aa20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 AGO2Q9UKV8 859 aaKnown RBP20.78■□□□□ 0.92
LAPTM4B-204ENST00000619747 ANKRD62A6NC57 917 aa20.77■□□□□ 0.92
LAPTM4B-204ENST00000619747 GJB1P08034 283 aa20.77■□□□□ 0.92
LAPTM4B-204ENST00000619747 COPB2P35606 906 aa20.77■□□□□ 0.92
LAPTM4B-204ENST00000619747 FAM71AQ8IYT1 594 aa20.77■□□□□ 0.92
LAPTM4B-204ENST00000619747 PTPRJQ12913 1337 aa20.77■□□□□ 0.92
LAPTM4B-204ENST00000619747 MAPK13O15264 365 aa20.77■□□□□ 0.92
LAPTM4B-204ENST00000619747 RAD51CO43502 376 aa20.77■□□□□ 0.92
LAPTM4B-204ENST00000619747 NAA25Q14CX7 972 aa20.77■□□□□ 0.92
LAPTM4B-204ENST00000619747 AADACL2Q6P093 401 aa20.77■□□□□ 0.92
LAPTM4B-204ENST00000619747 ZBTB33Q86T24 672 aa20.77■□□□□ 0.92
LAPTM4B-204ENST00000619747 CPNE8Q86YQ8 564 aa20.77■□□□□ 0.92
LAPTM4B-204ENST00000619747 PRPF31Q8WWY3 499 aaKnown RBP20.77■□□□□ 0.92
LAPTM4B-204ENST00000619747 HVCN1Q96D96 273 aa20.77■□□□□ 0.92
LAPTM4B-204ENST00000619747 TCHPQ9BT92 498 aa20.77■□□□□ 0.92
LAPTM4B-204ENST00000619747 INTUQ9ULD6 942 aa20.77■□□□□ 0.92
LAPTM4B-204ENST00000619747 NOC2LQ9Y3T9 749 aaKnown RBP20.77■□□□□ 0.92
LAPTM4B-204ENST00000619747 GRIK3Q13003 919 aa20.76■□□□□ 0.91
LAPTM4B-204ENST00000619747 GJC2Q5T442 439 aaPredicted RBP20.76■□□□□ 0.91
LAPTM4B-204ENST00000619747 CDR2LQ86X02 465 aaPredicted RBP20.76■□□□□ 0.91
LAPTM4B-204ENST00000619747 TMEM174Q8WUU8 243 aa20.76■□□□□ 0.91
LAPTM4B-204ENST00000619747 PDGFCQ9NRA1 345 aa20.76■□□□□ 0.91
LAPTM4B-204ENST00000619747 RNF14Q9UBS8 474 aa20.76■□□□□ 0.91
LAPTM4B-204ENST00000619747 NR2E1Q9Y466 385 aa20.76■□□□□ 0.91
LAPTM4B-204ENST00000619747 MCM3APO60318 1980 aa20.76■□□□□ 0.91
LAPTM4B-204ENST00000619747 NOP56O00567 594 aaKnown RBP20.76■□□□□ 0.91
LAPTM4B-204ENST00000619747 RFX1P22670 979 aa20.76■□□□□ 0.91
LAPTM4B-204ENST00000619747 GUCY2FP51841 1108 aa20.76■□□□□ 0.91
LAPTM4B-204ENST00000619747 DPY19L2Q6NUT2 758 aa20.76■□□□□ 0.91
LAPTM4B-204ENST00000619747 SLFN11Q7Z7L1 901 aa20.76■□□□□ 0.91
LAPTM4B-204ENST00000619747 SHC3Q92529 594 aa20.76■□□□□ 0.91
LAPTM4B-204ENST00000619747 NOCTQ9UK39 431 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms