RNA–Protein interactions for RNA: ENST00000619290.4

CYFIP1-210, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-210ENST00000619290 FAM160A2Q8N612 972 aaPredicted RBP13.68□□□□□ -0.22
CYFIP1-210ENST00000619290 DHX33Q9H6R0 707 aaKnown RBP13.68□□□□□ -0.22
CYFIP1-210ENST00000619290 KLK14Q9P0G3 267 aa13.68□□□□□ -0.22
CYFIP1-210ENST00000619290 NAP1L2Q9ULW6 460 aaPredicted RBP13.68□□□□□ -0.22
CYFIP1-210ENST00000619290 PIAS3Q9Y6X2 628 aa13.68□□□□□ -0.22
CYFIP1-210ENST00000619290 CASTOR2A6NHX0 329 aa13.67□□□□□ -0.22
CYFIP1-210ENST00000619290 INO80B-WBP1J3KQ70 363 aa13.67□□□□□ -0.22
CYFIP1-210ENST00000619290 ASAP2O43150 1006 aa13.67□□□□□ -0.22
CYFIP1-210ENST00000619290 KIF4AO95239 1232 aa13.67□□□□□ -0.22
CYFIP1-210ENST00000619290 FCARP24071 287 aa13.67□□□□□ -0.22
CYFIP1-210ENST00000619290 OR1D2P34982 312 aa13.67□□□□□ -0.22
CYFIP1-210ENST00000619290 RFC5P40937 340 aa13.67□□□□□ -0.22
CYFIP1-210ENST00000619290 EXOSC10Q01780 885 aaKnown RBP13.67□□□□□ -0.22
CYFIP1-210ENST00000619290 RAB33AQ14088 237 aa13.67□□□□□ -0.22
CYFIP1-210ENST00000619290 GAS6Q14393 721 aa13.67□□□□□ -0.22
CYFIP1-210ENST00000619290 HEATR6Q6AI08 1181 aaKnown RBP13.67□□□□□ -0.22
CYFIP1-210ENST00000619290 UNQ6494/PRO21346Q6UXR6 183 aa13.67□□□□□ -0.22
CYFIP1-210ENST00000619290 CEP68Q76N32 757 aa13.67□□□□□ -0.22
CYFIP1-210ENST00000619290 C12orf50Q8NA57 414 aaPredicted RBP13.67□□□□□ -0.22
CYFIP1-210ENST00000619290 TCP11Q8WWU5 503 aa13.67□□□□□ -0.22
CYFIP1-210ENST00000619290 IRF7Q92985 503 aa13.67□□□□□ -0.22
CYFIP1-210ENST00000619290 TRMT61BQ9BVS5 477 aaKnown RBP13.67□□□□□ -0.22
CYFIP1-210ENST00000619290 RXFP3Q9NSD7 469 aa13.67□□□□□ -0.22
CYFIP1-210ENST00000619290 PARP2Q9UGN5 583 aa13.67□□□□□ -0.22
CYFIP1-210ENST00000619290 AXIN1O15169 862 aa13.66□□□□□ -0.22
CYFIP1-210ENST00000619290 KCNK5O95279 499 aa13.66□□□□□ -0.22
CYFIP1-210ENST00000619290 TDP2O95551 362 aa13.66□□□□□ -0.22
CYFIP1-210ENST00000619290 CHRNB1P11230 501 aa13.66□□□□□ -0.22
CYFIP1-210ENST00000619290 QARSP47897 775 aaKnown RBP13.66□□□□□ -0.22
CYFIP1-210ENST00000619290 PTENP60484 403 aa13.66□□□□□ -0.22
CYFIP1-210ENST00000619290 TUSC3Q13454 348 aa13.66□□□□□ -0.22
CYFIP1-210ENST00000619290 EMC2Q15006 297 aa13.66□□□□□ -0.22
CYFIP1-210ENST00000619290 CCDC6Q16204 474 aa13.66□□□□□ -0.22
CYFIP1-210ENST00000619290 FAM78AQ5JUQ0 283 aa13.66□□□□□ -0.22
CYFIP1-210ENST00000619290 PDXDC1Q6P996 788 aa13.66□□□□□ -0.22
CYFIP1-210ENST00000619290 CDR2LQ86X02 465 aaPredicted RBP13.66□□□□□ -0.22
CYFIP1-210ENST00000619290 SPEM1Q8N4L4 309 aa13.66□□□□□ -0.22
CYFIP1-210ENST00000619290 TBCKQ8TEA7 893 aa13.66□□□□□ -0.22
CYFIP1-210ENST00000619290 ARRDC1-AS1Q9H2J1 176 aa13.66□□□□□ -0.22
CYFIP1-210ENST00000619290 ZFP14Q9HCL3 533 aa13.66□□□□□ -0.22
CYFIP1-210ENST00000619290 ZNF334Q9HCZ1 680 aaPredicted RBP13.66□□□□□ -0.22
CYFIP1-210ENST00000619290 PPME1Q9Y570 386 aa13.66□□□□□ -0.22
CYFIP1-210ENST00000619290 TDRD15B5MCY1 1934 aaKnown RBP13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 CCDC196A0A1B0GTZ2 297 aa13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 K7ESF4 209 aa13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 EML1O00423 815 aa13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 NRG2O14511 850 aaPredicted RBP13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 PRPF3O43395 683 aaKnown RBP13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 NPTXRO95502 500 aa13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 ARF4P18085 180 aaPredicted RBP13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 CCNE1P24864 410 aa13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 GDI1P31150 447 aa13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 RCAN1P53805 252 aa13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 MBTD1Q05BQ5 628 aa13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 AMHR2Q16671 573 aa13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 STPG1Q5TH74 334 aa13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 RTL10Q7L3V2 364 aa13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 DHX32Q7L7V1 743 aaKnown RBP13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 MAP4K3Q8IVH8 894 aa13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 CCDC148Q8NFR7 591 aa13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 ETNPPLQ8TBG4 499 aa13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 AVENQ9NQS1 362 aaPredicted RBP13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 WRAP73Q9P2S5 460 aaPredicted RBP13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 CDY1Q9Y6F8 540 aa13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 F5P12259 2224 aa13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 IGF2RP11717 2491 aa13.65□□□□□ -0.22
CYFIP1-210ENST00000619290 NOTCH4Q99466 2003 aa13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 ZMYM2Q9UBW7 1377 aa13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 CYP3A7-CYP3A51PA0A087WV96 503 aa13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 B4GALT5O43286 388 aa13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 DKC1O60832 514 aaKnown RBP eCLIP13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 PAPSS2O95340 614 aaPredicted RBP13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 ZNF806P0C7X5 589 aa13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 PTPN2P17706 415 aa13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 PSMC3P17980 439 aa13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 CYP3A7P24462 503 aa13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 ELAVL2Q12926 359 aaKnown RBP13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 PTGDRQ13258 359 aa13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 SLC27A1Q6PCB7 646 aa13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 KDF1Q8NAX2 398 aaPredicted RBP13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 TCEAL4Q96EI5 215 aa13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 MTRQ99707 1265 aa13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 LSM14BQ9BX40 385 aaKnown RBP13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 SLKQ9H2G2 1235 aaPredicted RBP13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 TRPV5Q9NQA5 729 aa13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 RBM12Q9NTZ6 932 aaKnown RBP13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 VPS54Q9P1Q0 977 aa13.64□□□□□ -0.23
CYFIP1-210ENST00000619290 LRG1P02750 347 aa13.63□□□□□ -0.23
CYFIP1-210ENST00000619290 P4HBP07237 508 aaKnown RBP13.63□□□□□ -0.23
CYFIP1-210ENST00000619290 YWHABP31946 246 aaKnown RBP13.63□□□□□ -0.23
CYFIP1-210ENST00000619290 AKAP17AQ02040 695 aaKnown RBP13.63□□□□□ -0.23
CYFIP1-210ENST00000619290 TFDP1Q14186 410 aa13.63□□□□□ -0.23
CYFIP1-210ENST00000619290 LRRC32Q14392 662 aa13.63□□□□□ -0.23
CYFIP1-210ENST00000619290 MXD4Q14582 209 aaPredicted RBP13.63□□□□□ -0.23
CYFIP1-210ENST00000619290 PRSS36Q5K4E3 855 aa13.63□□□□□ -0.23
CYFIP1-210ENST00000619290 PSAPL1Q6NUJ1 521 aa13.63□□□□□ -0.23
CYFIP1-210ENST00000619290 VITQ6UXI7 678 aa13.63□□□□□ -0.23
CYFIP1-210ENST00000619290 Q6ZS52 159 aa13.63□□□□□ -0.23
CYFIP1-210ENST00000619290 ASB16Q96NS5 453 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms