RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.22■■□□□ 1.95
PMS1-220ENST00000618056 GRXCR2A6NFK2 248 aa27.22■■□□□ 1.95
PMS1-220ENST00000618056 LIG4P49917 911 aa27.22■■□□□ 1.95
PMS1-220ENST00000618056 OSTNP61366 133 aa27.22■■□□□ 1.95
PMS1-220ENST00000618056 KRT85P78386 507 aa27.22■■□□□ 1.95
PMS1-220ENST00000618056 HSP90AA2PQ14568 343 aaPredicted RBP27.22■■□□□ 1.95
PMS1-220ENST00000618056 PTPN14Q15678 1187 aa27.22■■□□□ 1.95
PMS1-220ENST00000618056 VN1R2Q8NFZ6 395 aa27.22■■□□□ 1.95
PMS1-220ENST00000618056 AUTS2Q8WXX7 1259 aa27.22■■□□□ 1.95
PMS1-220ENST00000618056 HVCN1Q96D96 273 aa27.22■■□□□ 1.95
PMS1-220ENST00000618056 OLFML3Q9NRN5 406 aa27.22■■□□□ 1.95
PMS1-220ENST00000618056 ADAM28Q9UKQ2 775 aa27.22■■□□□ 1.95
PMS1-220ENST00000618056 F8W810 466 aa27.21■■□□□ 1.95
PMS1-220ENST00000618056 PPP1R37O75864 691 aa27.21■■□□□ 1.95
PMS1-220ENST00000618056 COASYQ13057 564 aa27.21■■□□□ 1.95
PMS1-220ENST00000618056 DHX58Q96C10 678 aa27.21■■□□□ 1.95
PMS1-220ENST00000618056 SNX27Q96L92 541 aa27.21■■□□□ 1.95
PMS1-220ENST00000618056 PAAF1Q9BRP4 392 aa27.21■■□□□ 1.95
PMS1-220ENST00000618056 STRA6Q9BX79 667 aa27.21■■□□□ 1.95
PMS1-220ENST00000618056 HAPLN2Q9GZV7 340 aa27.21■■□□□ 1.95
PMS1-220ENST00000618056 FAM13BQ9NYF5 915 aa27.21■■□□□ 1.95
PMS1-220ENST00000618056 CD207Q9UJ71 328 aa27.21■■□□□ 1.95
PMS1-220ENST00000618056 FAM50BQ9Y247 325 aa27.21■■□□□ 1.95
PMS1-220ENST00000618056 SMIM28A0A1B0GU29 152 aa27.2■■□□□ 1.95
PMS1-220ENST00000618056 CASTOR2A6NHX0 329 aa27.2■■□□□ 1.95
PMS1-220ENST00000618056 CLASP2O75122 1294 aaKnown RBP27.2■■□□□ 1.95
PMS1-220ENST00000618056 SRGAP2BP0DMP2 458 aa27.2■■□□□ 1.95
PMS1-220ENST00000618056 HARSP12081 509 aaKnown RBP27.2■■□□□ 1.95
PMS1-220ENST00000618056 ZC2HC1CQ53FD0 456 aaPredicted RBP27.2■■□□□ 1.95
PMS1-220ENST00000618056 GLRA4Q5JXX5 417 aa27.2■■□□□ 1.95
PMS1-220ENST00000618056 LEO1Q8WVC0 666 aaPredicted RBP27.2■■□□□ 1.95
PMS1-220ENST00000618056 UHRF1Q96T88 793 aaPredicted RBP27.2■■□□□ 1.95
PMS1-220ENST00000618056 MAGEF1Q9HAY2 307 aa27.2■■□□□ 1.95
PMS1-220ENST00000618056 CNTN3Q9P232 1028 aa27.2■■□□□ 1.95
PMS1-220ENST00000618056 BARX2Q9UMQ3 279 aaPredicted RBP27.2■■□□□ 1.95
PMS1-220ENST00000618056 VWA8A3KMH1 1905 aa27.2■■□□□ 1.94
PMS1-220ENST00000618056 LILRB3O75022 631 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 IDEP14735 1019 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 KCNE1P15382 129 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 CA8P35219 290 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 RBM10P98175 930 aaKnown RBP27.19■■□□□ 1.94
PMS1-220ENST00000618056 FUT10Q6P4F1 479 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 MRPL44Q9H9J2 332 aaKnown RBP27.19■■□□□ 1.94
PMS1-220ENST00000618056 MRPL17Q9NRX2 175 aaKnown RBP27.19■■□□□ 1.94
PMS1-220ENST00000618056 CACNG4Q9UBN1 327 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 SSX2IPQ9Y2D8 614 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 POLR2DO15514 142 aaKnown RBP27.19■■□□□ 1.94
PMS1-220ENST00000618056 URODP06132 367 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 ANK1P16157 1881 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 MATR3P43243 847 aaKnown RBP eCLIP27.19■■□□□ 1.94
PMS1-220ENST00000618056 AMPD3Q01432 767 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 SMAD4Q13485 552 aaKnown RBP27.19■■□□□ 1.94
PMS1-220ENST00000618056 KYAT1Q16773 422 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 HERC4Q5GLZ8 1057 aaPredicted RBP27.19■■□□□ 1.94
PMS1-220ENST00000618056 CNNM4Q6P4Q7 775 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 TAS1R1Q7RTX1 841 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 GPR65Q8IYL9 337 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 SMRP1Q8NCR6 262 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 SPATA32Q96LK8 384 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 PYM1Q9BRP8 204 aaKnown RBP27.19■■□□□ 1.94
PMS1-220ENST00000618056 GPR62Q9BZJ7 368 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 TRIM9Q9C026 710 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 CHST7Q9NS84 486 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 SLC38A7Q9NVC3 462 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 PANK4Q9NVE7 773 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 HCFC2Q9Y5Z7 792 aa27.19■■□□□ 1.94
PMS1-220ENST00000618056 MTCL1Q9Y4B5 1905 aaKnown RBP27.18■■□□□ 1.94
PMS1-220ENST00000618056 MEFVO15553 781 aaPredicted RBP27.18■■□□□ 1.94
PMS1-220ENST00000618056 FAM189A1O60320 539 aa27.18■■□□□ 1.94
PMS1-220ENST00000618056 CLTAP09496 248 aa27.18■■□□□ 1.94
PMS1-220ENST00000618056 IL9P15248 144 aa27.18■■□□□ 1.94
PMS1-220ENST00000618056 GLUD2P49448 558 aa27.18■■□□□ 1.94
PMS1-220ENST00000618056 SLC10A6Q3KNW5 377 aa27.18■■□□□ 1.94
PMS1-220ENST00000618056 KIAA0319Q5VV43 1072 aa27.18■■□□□ 1.94
PMS1-220ENST00000618056 SLC39A4Q6P5W5 647 aa27.18■■□□□ 1.94
PMS1-220ENST00000618056 TMEM87AQ8NBN3 555 aa27.18■■□□□ 1.94
PMS1-220ENST00000618056 RABGGTAQ92696 567 aa27.18■■□□□ 1.94
PMS1-220ENST00000618056 STAMQ92783 540 aa27.18■■□□□ 1.94
PMS1-220ENST00000618056 UROC1Q96N76 676 aa27.18■■□□□ 1.94
PMS1-220ENST00000618056 A0A0B4J269 797 aa27.17■■□□□ 1.94
PMS1-220ENST00000618056 TMEM189-UBE2V1I3L0A0 370 aa27.17■■□□□ 1.94
PMS1-220ENST00000618056 MBTPS2O43462 519 aa27.17■■□□□ 1.94
PMS1-220ENST00000618056 TADA2AO75478 443 aa27.17■■□□□ 1.94
PMS1-220ENST00000618056 KIF4AO95239 1232 aa27.17■■□□□ 1.94
PMS1-220ENST00000618056 DSG1Q02413 1049 aa27.17■■□□□ 1.94
PMS1-220ENST00000618056 ALCAMQ13740 583 aa27.17■■□□□ 1.94
PMS1-220ENST00000618056 CLUL1Q15846 466 aa27.17■■□□□ 1.94
PMS1-220ENST00000618056 USP41Q3LFD5 358 aa27.17■■□□□ 1.94
PMS1-220ENST00000618056 SEZ6Q53EL9 994 aa27.17■■□□□ 1.94
PMS1-220ENST00000618056 ADALQ6DHV7 355 aa27.17■■□□□ 1.94
PMS1-220ENST00000618056 CCDC65Q8IXS2 484 aa27.17■■□□□ 1.94
PMS1-220ENST00000618056 CASP10Q92851 521 aa27.17■■□□□ 1.94
PMS1-220ENST00000618056 CHAMP1Q96JM3 812 aa27.17■■□□□ 1.94
PMS1-220ENST00000618056 ZMAT2Q96NC0 199 aaKnown RBP27.17■■□□□ 1.94
PMS1-220ENST00000618056 SCAND2PQ9GZW5 306 aaPredicted RBP27.17■■□□□ 1.94
PMS1-220ENST00000618056 PLEKHA5Q9HAU0 1116 aa27.17■■□□□ 1.94
PMS1-220ENST00000618056 KCNH3Q9ULD8 1083 aa27.17■■□□□ 1.94
PMS1-220ENST00000618056 STYXL1Q9Y6J8 313 aa27.17■■□□□ 1.94
PMS1-220ENST00000618056 SF3B1O75533 1304 aaKnown RBP eCLIP27.17■■□□□ 1.945e-8■■■■■ 189.5
PMS1-220ENST00000618056 OGTO15294 1046 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms