RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 IER5LQ5T953 404 aa24.42■■□□□ 1.5
NEDD4L-237ENST00000617539 ZNF707Q96C28 371 aaPredicted RBP24.42■■□□□ 1.5
NEDD4L-237ENST00000617539 TARS2Q9BW92 718 aaKnown RBP24.42■■□□□ 1.5
NEDD4L-237ENST00000617539 KMT5AQ9NQR1 393 aa24.42■■□□□ 1.5
NEDD4L-237ENST00000617539 PDCD11Q14690 1871 aaKnown RBP24.42■■□□□ 1.5
NEDD4L-237ENST00000617539 CITO14578 2027 aa24.42■■□□□ 1.5
NEDD4L-237ENST00000617539 DOCK8Q8NF50 2099 aa24.41■■□□□ 1.5
NEDD4L-237ENST00000617539 PROZP22891 400 aa24.41■■□□□ 1.5
NEDD4L-237ENST00000617539 SLC12A3P55017 1021 aa24.41■■□□□ 1.5
NEDD4L-237ENST00000617539 RAD51AP2Q09MP3 1159 aa24.41■■□□□ 1.5
NEDD4L-237ENST00000617539 TMEM119Q4V9L6 283 aa24.41■■□□□ 1.5
NEDD4L-237ENST00000617539 FAM171A1Q5VUB5 890 aa24.41■■□□□ 1.5
NEDD4L-237ENST00000617539 ARL6IP4Q66PJ3 421 aaKnown RBP24.41■■□□□ 1.5
NEDD4L-237ENST00000617539 CD300LGQ6UXG3 332 aa24.41■■□□□ 1.5
NEDD4L-237ENST00000617539 SYT2Q8N9I0 419 aaPredicted RBP24.41■■□□□ 1.5
NEDD4L-237ENST00000617539 LRRC15Q8TF66 581 aa24.41■■□□□ 1.5
NEDD4L-237ENST00000617539 RHOBTB2Q9BYZ6 727 aa24.41■■□□□ 1.5
NEDD4L-237ENST00000617539 SLC16A4O15374 487 aa24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 C1RP00736 705 aa24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 GRM5P41594 1212 aa24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 VCPP55072 806 aaKnown RBP24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 NHLH1Q02575 133 aa24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 ZNF568Q3ZCX4 644 aa24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 XKR4Q5GH76 650 aa24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 LARP1BQ659C4 914 aaKnown RBP24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 UBALD2Q8IYN6 164 aa24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 PLCD3Q8N3E9 789 aa24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 PRSS33Q8NF86 280 aa24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 LNX1Q8TBB1 728 aaPredicted RBP24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 HDAC7Q8WUI4 952 aa24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 PIK3R5Q8WYR1 880 aa24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 CLSTN3Q9BQT9 956 aa24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 NTPCRQ9BSD7 190 aaKnown RBP24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 TTPALQ9BTX7 342 aa24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 TIPINQ9BVW5 301 aa24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 MRPL4Q9BYD3 311 aaKnown RBP24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 C17orf75Q9HAS0 396 aa24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 GOLGA2P5Q9HBQ8 144 aa24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 DOCK6Q96HP0 2047 aa24.4■■□□□ 1.5
NEDD4L-237ENST00000617539 MEFVO15553 781 aaPredicted RBP24.39■■□□□ 1.49
NEDD4L-237ENST00000617539 CLCNKBP51801 687 aa24.39■■□□□ 1.49
NEDD4L-237ENST00000617539 SOX4Q06945 474 aaPredicted RBP24.39■■□□□ 1.49
NEDD4L-237ENST00000617539 ALKAL1Q6UXT8 129 aa24.39■■□□□ 1.49
NEDD4L-237ENST00000617539 OTOP3Q7RTS5 596 aa24.39■■□□□ 1.49
NEDD4L-237ENST00000617539 SUGP1Q8IWZ8 645 aaKnown RBP24.39■■□□□ 1.49
NEDD4L-237ENST00000617539 NT5C3AQ9H0P0 336 aa24.39■■□□□ 1.49
NEDD4L-237ENST00000617539 PLEKHA4Q9H4M7 779 aa24.39■■□□□ 1.49
NEDD4L-237ENST00000617539 WDR6Q9NNW5 1121 aaKnown RBP24.39■■□□□ 1.49
NEDD4L-237ENST00000617539 DAXXQ9UER7 740 aaPredicted RBP24.39■■□□□ 1.49
NEDD4L-237ENST00000617539 DPP7Q9UHL4 492 aa24.39■■□□□ 1.49
NEDD4L-237ENST00000617539 RBM19Q9Y4C8 960 aaKnown RBP24.39■■□□□ 1.49
NEDD4L-237ENST00000617539 NPHP3-ACAD11A0A0J9YXS1 232 aa24.38■■□□□ 1.49
NEDD4L-237ENST00000617539 SMIM28A0A1B0GU29 152 aa24.38■■□□□ 1.49
NEDD4L-237ENST00000617539 TMEM189-UBE2V1I3L0A0 370 aa24.38■■□□□ 1.49
NEDD4L-237ENST00000617539 ADAM12O43184 909 aa24.38■■□□□ 1.49
NEDD4L-237ENST00000617539 PLA2G4BP0C869 781 aa24.38■■□□□ 1.49
NEDD4L-237ENST00000617539 OSTNP61366 133 aa24.38■■□□□ 1.49
NEDD4L-237ENST00000617539 CREMQ03060 361 aa24.38■■□□□ 1.49
NEDD4L-237ENST00000617539 GRIN1Q05586 938 aa24.38■■□□□ 1.49
NEDD4L-237ENST00000617539 CUL4AQ13619 759 aa24.38■■□□□ 1.49
NEDD4L-237ENST00000617539 ARSHQ5FYA8 562 aa24.38■■□□□ 1.49
NEDD4L-237ENST00000617539 CYP26C1Q6V0L0 522 aa24.38■■□□□ 1.49
NEDD4L-237ENST00000617539 CEP57Q86XR8 500 aa24.38■■□□□ 1.49
NEDD4L-237ENST00000617539 KCTD17Q8N5Z5 321 aa24.38■■□□□ 1.49
NEDD4L-237ENST00000617539 C3orf58Q8NDZ4 430 aa24.38■■□□□ 1.49
NEDD4L-237ENST00000617539 TMEM161BQ8NDZ6 487 aa24.38■■□□□ 1.49
NEDD4L-237ENST00000617539 SPIRE2Q8WWL2 714 aa24.38■■□□□ 1.49
NEDD4L-237ENST00000617539 SMG7Q92540 1137 aaKnown RBP24.38■■□□□ 1.49
NEDD4L-237ENST00000617539 ACSF2Q96CM8 615 aaPredicted RBP24.38■■□□□ 1.49
NEDD4L-237ENST00000617539 ZMAT2Q96NC0 199 aaKnown RBP24.38■■□□□ 1.49
NEDD4L-237ENST00000617539 CLUHO75153 1309 aa24.37■■□□□ 1.49
NEDD4L-237ENST00000617539 PLS3P13797 630 aa24.37■■□□□ 1.49
NEDD4L-237ENST00000617539 PSMD5Q16401 504 aa24.37■■□□□ 1.49
NEDD4L-237ENST00000617539 UPP1Q16831 310 aa24.37■■□□□ 1.49
NEDD4L-237ENST00000617539 ELMSAN1Q6PJG2 1045 aa24.37■■□□□ 1.49
NEDD4L-237ENST00000617539 APBB1IPQ7Z5R6 666 aaPredicted RBP24.37■■□□□ 1.49
NEDD4L-237ENST00000617539 ZBTB45Q96K62 511 aaPredicted RBP24.37■■□□□ 1.49
NEDD4L-237ENST00000617539 SNX27Q96L92 541 aa24.37■■□□□ 1.49
NEDD4L-237ENST00000617539 ZDHHC7Q9NXF8 308 aa24.37■■□□□ 1.49
NEDD4L-237ENST00000617539 PIEZO1Q92508 2521 aa24.36■■□□□ 1.49
NEDD4L-237ENST00000617539 B3GAT3O94766 335 aa24.36■■□□□ 1.49
NEDD4L-237ENST00000617539 MAPTP10636 758 aaKnown RBP24.36■■□□□ 1.49
NEDD4L-237ENST00000617539 MCF2P10911 925 aa24.36■■□□□ 1.49
NEDD4L-237ENST00000617539 FGFR3P22607 806 aa24.36■■□□□ 1.49
NEDD4L-237ENST00000617539 CACNB1Q02641 598 aaPredicted RBP24.36■■□□□ 1.49
NEDD4L-237ENST00000617539 ELAVL2Q12926 359 aaKnown RBP24.36■■□□□ 1.49
NEDD4L-237ENST00000617539 MPZL3Q6UWV2 235 aa24.36■■□□□ 1.49
NEDD4L-237ENST00000617539 AK8Q96MA6 479 aa24.36■■□□□ 1.49
NEDD4L-237ENST00000617539 CCDC94Q9BW85 323 aaPredicted RBP24.36■■□□□ 1.49
NEDD4L-237ENST00000617539 FBXW11Q9UKB1 542 aa24.36■■□□□ 1.49
NEDD4L-237ENST00000617539 ZMYND10O75800 440 aa24.35■■□□□ 1.49
NEDD4L-237ENST00000617539 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.35■■□□□ 1.49
NEDD4L-237ENST00000617539 CDK5RAP3Q96JB5 506 aa24.35■■□□□ 1.49
NEDD4L-237ENST00000617539 MYADMQ96S97 322 aa24.35■■□□□ 1.49
NEDD4L-237ENST00000617539 PRKD2Q9BZL6 878 aa24.35■■□□□ 1.49
NEDD4L-237ENST00000617539 KCNK12Q9HB15 430 aa24.35■■□□□ 1.49
NEDD4L-237ENST00000617539 TOPORSQ9NS56 1045 aaPredicted RBP24.35■■□□□ 1.49
NEDD4L-237ENST00000617539 BLOC1S4Q9NUP1 217 aa24.35■■□□□ 1.49
NEDD4L-237ENST00000617539 KCND2Q9NZV8 630 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms