RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 LCA5Q86VQ0 697 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 PDCD6IPQ8WUM4 868 aaKnown RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 KCNB2Q92953 911 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 FOXP3Q9BZS1 431 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 TUFMP49411 452 aaKnown RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 ORC2Q13416 577 aaPredicted RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 CAVIN1Q6NZI2 390 aaKnown RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 GLYCTKQ8IVS8 523 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 DEFB123Q8N688 67 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 ZNF274Q96GC6 653 aaPredicted RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 DISC1Q9NRI5 854 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 ZFP37Q9Y6Q3 630 aaPredicted RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 USP27XA6NNY8 438 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 C9J4A7 227 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 A1BGP04217 495 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 PHBP35232 272 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 FNDC3BQ53EP0 1204 aaKnown RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 CDKL2Q92772 493 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 TSR2Q969E8 191 aaKnown RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 EPSTI1Q96J88 318 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 RPGRIP1Q96KN7 1286 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 ZKSCAN3Q9BRR0 538 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 MUC3BQ9H195 1237 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 LRRC14BA6NHZ5 514 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 GOLGA8MH3BSY2 632 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 SPTLC1O15269 473 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 YKT6O15498 198 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 LMNB2Q03252 620 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 NELL2Q99435 816 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 MAGEF1Q9HAY2 307 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 ATG3Q9NT62 314 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 NDOR1Q9UHB4 597 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 TUBE1Q9UJT0 475 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 AXIN2Q9Y2T1 843 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 PNPLA7Q6ZV29 1317 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 MBD5Q9P267 1494 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 TEX28O15482 410 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 NDUFB5O43674 189 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 BMP4P12644 408 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 EFNA5P52803 228 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 DGKHQ86XP1 1220 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 IRX2Q9BZI1 471 aaPredicted RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 DLL1O00548 723 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 ZSCAN12O43309 604 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 NOL3O60936 208 aaKnown RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 CD63P08962 238 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 SCYL2Q6P3W7 929 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 SFXN1Q9H9B4 322 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 ARL15Q9NXU5 204 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 DDX41Q9UJV9 622 aaKnown RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 A0A1W2PRG0 241 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 C2CD2LO14523 706 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 GPC3P51654 580 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 CNTNAP1P78357 1384 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 GUCY1B3Q02153 619 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 TCEA2Q15560 299 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 CD302Q8IX05 232 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 CAMKK1Q8N5S9 505 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 CCDC3Q9BQI4 270 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 GRPEL1Q9HAV7 217 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 MICAL3Q7RTP6 2002 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 PDCD11Q14690 1871 aaKnown RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 ADM5C9JUS6 153 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 CHTF18Q8WVB6 975 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 KCNJ9Q92806 393 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 IRF7Q92985 503 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 LOC102724159A0A0B4J2E5 919 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 AP3B1O00203 1094 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 GPAA1O43292 621 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 USP2O75604 605 aaPredicted RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 PWP2Q15269 919 aaKnown RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 USP41Q3LFD5 358 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 ARHGAP45Q92619 1136 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 CRELD1Q96HD1 420 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 TMEM237Q96Q45 408 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 ATXN3LQ9H3M9 355 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 PSTPIP2Q9H939 334 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 SLC24A3Q9HC58 644 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 CITO14578 2027 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 PSME4Q14997 1843 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 A0A0B4J269 797 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 CSF1RP07333 972 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 IVLP07476 585 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 OAZ1P54368 228 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 MC1RQ01726 317 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 TP53BP2Q13625 1128 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 IL12RB2Q99665 862 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 JPH1Q9HDC5 661 aaPredicted RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 DAAM1Q9Y4D1 1078 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 URADA6NGE7 173 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 IFRD1O00458 451 aaPredicted RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 ASGR1P07306 291 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 FAM83BQ5T0W9 1011 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 NEK6Q9HC98 313 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 MTRF1LQ9UGC7 380 aaKnown RBP3.57□□□□□ -1.84
LPP-220ENST00000617246 COL4A3BPQ9Y5P4 624 aa3.57□□□□□ -1.84
LPP-220ENST00000617246 LRRC72A6NJI9 287 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 CLIC2O15247 247 aa3.56□□□□□ -1.84
LPP-220ENST00000617246 MFAP3P55082 362 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms