RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 CCDC159P0C7I6 412 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 STAT3P40763 770 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 QARSP47897 775 aaKnown RBP11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 SERPINB9P50453 376 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 ZNF200P98182 395 aaPredicted RBP11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 DNAJC3Q13217 504 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 ZCWPW2Q504Y3 356 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 RWDD4Q6NW29 188 aaKnown RBP11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 OSBPL8Q9BZF1 889 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 TMBIM4Q9HC24 238 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 BLOC1S6Q9UL45 172 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 TSC22D4Q9Y3Q8 395 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 CFAP74Q9C0B2 1584 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 PPEF1O14829 653 aaPredicted RBP11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 SPAG6O75602 509 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 KRT76Q01546 638 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 MAPK6Q16659 721 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 ANGPTL8Q6UXH0 198 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 CDR2LQ86X02 465 aaPredicted RBP11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 SLC44A5Q8NCS7 719 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 NLRP4Q96MN2 994 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 MRPL1Q9BYD6 325 aaKnown RBP11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 ADNPQ9H2P0 1102 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 SLAIN2Q9P270 581 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 SLC13A4Q9UKG4 626 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 FMO5P49326 533 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 RCN1Q15293 331 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 ITPRIPL1Q6GPH6 555 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 CNKSR1Q969H4 720 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 DNAJC7Q99615 494 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 DCLRE1BQ9H816 532 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 MRGBPQ9NV56 204 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 TFR2Q9UP52 801 aa11.24□□□□□ -0.61
CLTCL1-209ENST00000617103 UTYO14607 1347 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 UGGT1Q9NYU2 1555 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 PLA2R1Q13018 1463 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 GTPBP10A4D1E9 387 aaKnown RBP11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 XPAP23025 273 aaPredicted RBP11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 SCARF1Q14162 830 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 PODNQ7Z5L7 613 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 EIF2AK1Q9BQI3 630 aaKnown RBP11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 MANSC1Q9H8J5 431 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 CHCHD3Q9NX63 227 aaKnown RBP11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 KIF17Q9P2E2 1029 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 ZC3H7BQ9UGR2 993 aaKnown RBP11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 ARHGEF37A1IGU5 675 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 SMAPO00193 183 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 AP5Z1O43299 807 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 AKAP10O43572 662 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 COMTP21964 271 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 TARSP26639 723 aaKnown RBP11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 IFNA8P32881 189 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 ITGA8P53708 1063 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 PMS1P54277 932 aaKnown RBP11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 TRADDQ15628 312 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 GADL1Q6ZQY3 521 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 HAUS6Q7Z4H7 955 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 SUGP1Q8IWZ8 645 aaKnown RBP11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 TMCO5AQ8N6Q1 288 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 ANKRD27Q96NW4 1050 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 ZNF408Q9H9D4 720 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 DMGDHQ9UI17 866 aaKnown RBP11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 TEKT2Q9UIF3 430 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 ATP8B3O60423 1300 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 MYMKA6NI61 221 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 M0QYV0 167 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 O00370 1275 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 SLC9A1P19634 815 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 KCNJ1P48048 391 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 PTK7Q13308 1070 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 RABL6Q3YEC7 729 aaPredicted RBP11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 FAM102AQ5T9C2 384 aaPredicted RBP11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 C1orf228Q6PIY5 440 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 FRA10AC1Q70Z53 315 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 ADCK1Q86TW2 530 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 KIRREL3Q8IZU9 778 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 GALNT4Q8N4A0 578 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 ANKZF1Q9H8Y5 726 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 EML4Q9HC35 981 aaKnown RBP11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 RAB21Q9UL25 225 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 STAP1Q9ULZ2 295 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 PNPLA6Q8IY17 1366 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 ADGRL3Q9HAR2 1447 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 SNRPAP09012 282 aaKnown RBP11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 KLK7P49862 253 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 DSG1Q02413 1049 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 MAP3K10Q02779 954 aa11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 SPDYE1Q8NFV5 336 aaPredicted RBP11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 PAPOLBQ9NRJ5 636 aaKnown RBP11.23□□□□□ -0.61
CLTCL1-209ENST00000617103 TMEM247A6NEH6 219 aa11.22□□□□□ -0.61
CLTCL1-209ENST00000617103 ANGPT2O15123 496 aa11.22□□□□□ -0.61
CLTCL1-209ENST00000617103 NMT1P30419 496 aaKnown RBP11.22□□□□□ -0.61
CLTCL1-209ENST00000617103 NSUN2Q08J23 767 aaKnown RBP eCLIP11.22□□□□□ -0.61
CLTCL1-209ENST00000617103 QRICH1Q2TAL8 776 aa11.22□□□□□ -0.61
CLTCL1-209ENST00000617103 SLC27A3Q5K4L6 730 aa11.22□□□□□ -0.61
CLTCL1-209ENST00000617103 NAIF1Q69YI7 327 aaPredicted RBP11.22□□□□□ -0.61
CLTCL1-209ENST00000617103 C3orf62Q6ZUJ4 267 aa11.22□□□□□ -0.61
CLTCL1-209ENST00000617103 ARHGAP27Q6ZUM4 889 aa11.22□□□□□ -0.61
CLTCL1-209ENST00000617103 NEDD1Q8NHV4 660 aa11.22□□□□□ -0.61
CLTCL1-209ENST00000617103 TMA16Q96EY4 203 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms