RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 HVCN1Q96D96 273 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 MS4A14Q96JA4 679 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 MMS19Q96T76 1030 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 CCDC113Q9H0I3 377 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 ADGRA2Q96PE1 1338 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 MANSC4A6NHS7 340 aaPredicted RBP8.41□□□□□ -1.06
NEK3-207ENST00000617054 PDE2AO00408 941 aaPredicted RBP8.41□□□□□ -1.06
NEK3-207ENST00000617054 ATMINO43313 823 aaPredicted RBP8.41□□□□□ -1.06
NEK3-207ENST00000617054 MMEP08473 750 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 RHOXF2BP0C7M4 288 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 ZSCAN20P17040 1043 aaPredicted RBP8.41□□□□□ -1.06
NEK3-207ENST00000617054 AMPD2Q01433 879 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 TRIM32Q13049 653 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 PPFIA1Q13136 1202 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 MTHFD1LQ6UB35 978 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 RPUSD2Q8IZ73 545 aaKnown RBP8.41□□□□□ -1.06
NEK3-207ENST00000617054 ADAMTS19Q8TE59 1207 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 RHOXF2Q9BQY4 288 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 MTMR12Q9C0I1 747 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 CXCL16Q9H2A7 254 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 GABRQQ9UN88 632 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 SAR1BQ9Y6B6 198 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 KAT6AQ92794 2004 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 RBM47A0AV96 593 aaKnown RBP8.41□□□□□ -1.06
NEK3-207ENST00000617054 SLC15A5A6NIM6 579 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 TADA3O75528 432 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 HLA-DRAP01903 254 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 C4BPAP04003 597 aaKnown RBP8.41□□□□□ -1.06
NEK3-207ENST00000617054 TNFAIP3P21580 790 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 PIK3CAP42336 1068 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 GALCP54803 685 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 MBTD1Q05BQ5 628 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 GRIK4Q16099 956 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 DGKDQ16760 1214 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 ZNF394Q53GI3 561 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 NOP9Q86U38 636 aaKnown RBP8.41□□□□□ -1.06
NEK3-207ENST00000617054 ZBTB8OSQ8IWT0 167 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 NOA1Q8NC60 698 aaKnown RBP8.41□□□□□ -1.06
NEK3-207ENST00000617054 SLC30A5Q8TAD4 765 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 TCP11Q8WWU5 503 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 PCDHB18PQ96TA0 734 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 MRPL4Q9BYD3 311 aaKnown RBP8.41□□□□□ -1.06
NEK3-207ENST00000617054 APOBEC3GQ9HC16 384 aaKnown RBP8.41□□□□□ -1.06
NEK3-207ENST00000617054 FBXL5Q9UKA1 691 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 STYXL1Q9Y6J8 313 aa8.41□□□□□ -1.06
NEK3-207ENST00000617054 CNTNAP2Q9UHC6 1331 aa8.4□□□□□ -1.06
NEK3-207ENST00000617054 GPR25O00155 361 aa8.4□□□□□ -1.06
NEK3-207ENST00000617054 PHACTR2O75167 634 aa8.4□□□□□ -1.06
NEK3-207ENST00000617054 TACC1O75410 805 aa8.4□□□□□ -1.06
NEK3-207ENST00000617054 TOM1L1O75674 476 aa8.4□□□□□ -1.06
NEK3-207ENST00000617054 CFHP08603 1231 aa8.4□□□□□ -1.06
NEK3-207ENST00000617054 SLC10A3P09131 477 aa8.4□□□□□ -1.06
NEK3-207ENST00000617054 ZNF865P0CJ78 1059 aaPredicted RBP8.4□□□□□ -1.06
NEK3-207ENST00000617054 FERP16591 822 aa8.4□□□□□ -1.06
NEK3-207ENST00000617054 PRKCIP41743 596 aa8.4□□□□□ -1.06
NEK3-207ENST00000617054 SNRPFP62306 86 aaKnown RBP8.4□□□□□ -1.06
NEK3-207ENST00000617054 HTRA3P83110 453 aa8.4□□□□□ -1.06
NEK3-207ENST00000617054 TFAMQ00059 246 aaKnown RBP8.4□□□□□ -1.06
NEK3-207ENST00000617054 NAB2Q15742 525 aa8.4□□□□□ -1.06
NEK3-207ENST00000617054 ZNF568Q3ZCX4 644 aa8.4□□□□□ -1.06
NEK3-207ENST00000617054 ATF7IP2Q5U623 682 aa8.4□□□□□ -1.06
NEK3-207ENST00000617054 FBXO38Q6PIJ6 1188 aa8.4□□□□□ -1.06
NEK3-207ENST00000617054 TLK2Q86UE8 772 aa8.4□□□□□ -1.06
NEK3-207ENST00000617054 TMEM174Q8WUU8 243 aa8.4□□□□□ -1.06
NEK3-207ENST00000617054 ARHGEF26Q96DR7 871 aa8.4□□□□□ -1.06
NEK3-207ENST00000617054 THAP2Q9H0W7 228 aa8.4□□□□□ -1.06
NEK3-207ENST00000617054 TMEM134Q9H6X4 195 aa8.4□□□□□ -1.06
NEK3-207ENST00000617054 GJD2Q9UKL4 321 aa8.4□□□□□ -1.06
NEK3-207ENST00000617054 MYADML2A6NDP7 307 aa8.4□□□□□ -1.07
NEK3-207ENST00000617054 H0YCG3 227 aa8.4□□□□□ -1.07
NEK3-207ENST00000617054 FAM189A1O60320 539 aa8.4□□□□□ -1.07
NEK3-207ENST00000617054 MYL3P08590 195 aa8.4□□□□□ -1.07
NEK3-207ENST00000617054 CXCL8P10145 99 aa8.4□□□□□ -1.07
NEK3-207ENST00000617054 GUCY2FP51841 1108 aa8.4□□□□□ -1.07
NEK3-207ENST00000617054 CDR1P51861 262 aa8.4□□□□□ -1.07
NEK3-207ENST00000617054 PTENP60484 403 aa8.4□□□□□ -1.07
NEK3-207ENST00000617054 PSMD6Q15008 389 aa8.4□□□□□ -1.07
NEK3-207ENST00000617054 CDCA2Q69YH5 1023 aaPredicted RBP8.4□□□□□ -1.07
NEK3-207ENST00000617054 SLFN12LQ6IEE8 588 aa8.4□□□□□ -1.07
NEK3-207ENST00000617054 TRAPPC11Q7Z392 1133 aa8.4□□□□□ -1.07
NEK3-207ENST00000617054 ZNF467Q7Z7K2 595 aaPredicted RBP8.4□□□□□ -1.07
NEK3-207ENST00000617054 KIAA0319LQ8IZA0 1049 aa8.4□□□□□ -1.07
NEK3-207ENST00000617054 TMC2Q8TDI7 906 aa8.4□□□□□ -1.07
NEK3-207ENST00000617054 LMBR1Q8WVP7 490 aa8.4□□□□□ -1.07
NEK3-207ENST00000617054 KAT2BQ92831 832 aa8.4□□□□□ -1.07
NEK3-207ENST00000617054 NT5C1BQ96P26 610 aa8.4□□□□□ -1.07
NEK3-207ENST00000617054 NOX5Q96PH1 765 aa8.4□□□□□ -1.07
NEK3-207ENST00000617054 TSGA10Q9BZW7 698 aa8.4□□□□□ -1.07
NEK3-207ENST00000617054 MYO1AQ9UBC5 1043 aa8.4□□□□□ -1.07
NEK3-207ENST00000617054 TRIP12Q14669 1992 aaPredicted RBP8.4□□□□□ -1.07
NEK3-207ENST00000617054 PASKQ96RG2 1323 aa8.4□□□□□ -1.07
NEK3-207ENST00000617054 ABLIM1O14639 778 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 MAPK13O15264 365 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 PGK1P00558 417 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 CD58P19256 250 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 SLC26A2P50443 739 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 GPC3P51654 580 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 EFNA5P52803 228 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 ZACNQ401N2 412 aa8.39□□□□□ -1.07
NEK3-207ENST00000617054 IQSEC1Q6DN90 963 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms