RNA–Protein interactions for RNA: ENST00000617003.1

AP3S2-216, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

BASIC

Gene AP3S2, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-216ENST00000617003 ATG2AQ2TAZ0 1938 aa17.83■□□□□ 0.44
AP3S2-216ENST00000617003 SMIM28A0A1B0GU29 152 aa17.83■□□□□ 0.44
AP3S2-216ENST00000617003 EIF3DO15371 548 aaKnown RBP eCLIP17.83■□□□□ 0.44
AP3S2-216ENST00000617003 FAM189A1O60320 539 aa17.83■□□□□ 0.44
AP3S2-216ENST00000617003 CSPG5O95196 566 aa17.83■□□□□ 0.44
AP3S2-216ENST00000617003 CLTAP09496 248 aa17.83■□□□□ 0.44
AP3S2-216ENST00000617003 PPM1AP35813 382 aa17.83■□□□□ 0.44
AP3S2-216ENST00000617003 KRT17Q04695 432 aa17.83■□□□□ 0.44
AP3S2-216ENST00000617003 PSMD2Q13200 908 aa17.83■□□□□ 0.44
AP3S2-216ENST00000617003 POSTNQ15063 836 aa17.83■□□□□ 0.44
AP3S2-216ENST00000617003 PTPROQ16827 1216 aa17.83■□□□□ 0.44
AP3S2-216ENST00000617003 SLC10A6Q3KNW5 377 aa17.83■□□□□ 0.44
AP3S2-216ENST00000617003 GLRA4Q5JXX5 417 aa17.83■□□□□ 0.44
AP3S2-216ENST00000617003 CLEC17AQ6ZS10 378 aa17.83■□□□□ 0.44
AP3S2-216ENST00000617003 TMEM173Q86WV6 379 aaPredicted RBP17.83■□□□□ 0.44
AP3S2-216ENST00000617003 SCFD1Q8WVM8 642 aa17.83■□□□□ 0.44
AP3S2-216ENST00000617003 POMGNT1Q8WZA1 660 aa17.83■□□□□ 0.44
AP3S2-216ENST00000617003 CCDC34Q96HJ3 373 aa17.83■□□□□ 0.44
AP3S2-216ENST00000617003 TIGD1Q96MW7 591 aa17.83■□□□□ 0.44
AP3S2-216ENST00000617003 LMAN2LQ9H0V9 348 aa17.83■□□□□ 0.44
AP3S2-216ENST00000617003 TOPORSQ9NS56 1045 aaPredicted RBP17.83■□□□□ 0.44
AP3S2-216ENST00000617003 AGO2Q9UKV8 859 aaKnown RBP17.83■□□□□ 0.44
AP3S2-216ENST00000617003 UBE2HP62256 183 aa17.82■□□□□ 0.44
AP3S2-216ENST00000617003 UBE3AQ05086 875 aa17.82■□□□□ 0.44
AP3S2-216ENST00000617003 PNOCQ13519 176 aa17.82■□□□□ 0.44
AP3S2-216ENST00000617003 NAB2Q15742 525 aa17.82■□□□□ 0.44
AP3S2-216ENST00000617003 NELFCDQ8IXH7 590 aa17.82■□□□□ 0.44
AP3S2-216ENST00000617003 MAFAQ8NHW3 353 aaPredicted RBP17.82■□□□□ 0.44
AP3S2-216ENST00000617003 BCL7CQ8WUZ0 217 aaPredicted RBP17.82■□□□□ 0.44
AP3S2-216ENST00000617003 RABGGTAQ92696 567 aa17.82■□□□□ 0.44
AP3S2-216ENST00000617003 IGSF21Q96ID5 467 aa17.82■□□□□ 0.44
AP3S2-216ENST00000617003 SNX27Q96L92 541 aa17.82■□□□□ 0.44
AP3S2-216ENST00000617003 ZMAT2Q96NC0 199 aaKnown RBP17.82■□□□□ 0.44
AP3S2-216ENST00000617003 CACNG4Q9UBN1 327 aa17.82■□□□□ 0.44
AP3S2-216ENST00000617003 PUF60Q9UHX1 559 aaKnown RBP17.82■□□□□ 0.44
AP3S2-216ENST00000617003 PRG3Q9Y2Y8 225 aaPredicted RBP17.82■□□□□ 0.44
AP3S2-216ENST00000617003 CXCL8P10145 99 aa17.81■□□□□ 0.44
AP3S2-216ENST00000617003 IRS1P35568 1242 aa17.81■□□□□ 0.44
AP3S2-216ENST00000617003 ACOT2P49753 483 aa17.81■□□□□ 0.44
AP3S2-216ENST00000617003 ERVFC1P60507 584 aa17.81■□□□□ 0.44
AP3S2-216ENST00000617003 TUSC3Q13454 348 aa17.81■□□□□ 0.44
AP3S2-216ENST00000617003 KYAT1Q16773 422 aa17.81■□□□□ 0.44
AP3S2-216ENST00000617003 KIAA0895Q8NCT3 520 aa17.81■□□□□ 0.44
AP3S2-216ENST00000617003 ZSWIM2Q8NEG5 633 aa17.81■□□□□ 0.44
AP3S2-216ENST00000617003 CCDC47Q96A33 483 aaKnown RBP17.81■□□□□ 0.44
AP3S2-216ENST00000617003 TMEM169Q96HH4 297 aa17.81■□□□□ 0.44
AP3S2-216ENST00000617003 PPP1R10Q96QC0 940 aaKnown RBP17.81■□□□□ 0.44
AP3S2-216ENST00000617003 PCIF1Q9H4Z3 704 aa17.81■□□□□ 0.44
AP3S2-216ENST00000617003 RPF1Q9H9Y2 349 aaKnown RBP17.81■□□□□ 0.44
AP3S2-216ENST00000617003 CNTN3Q9P232 1028 aa17.81■□□□□ 0.44
AP3S2-216ENST00000617003 CPSF3Q9UKF6 684 aaKnown RBP17.81■□□□□ 0.44
AP3S2-216ENST00000617003 LZTS1Q9Y250 596 aa17.81■□□□□ 0.44
AP3S2-216ENST00000617003 PDCD11Q14690 1871 aaKnown RBP17.81■□□□□ 0.44
AP3S2-216ENST00000617003 CARNS1A5YM72 827 aa17.8■□□□□ 0.44
AP3S2-216ENST00000617003 LACTBL1A8MY62 500 aa17.8■□□□□ 0.44
AP3S2-216ENST00000617003 RHOBTB3O94955 611 aa17.8■□□□□ 0.44
AP3S2-216ENST00000617003 KCNE1P15382 129 aa17.8■□□□□ 0.44
AP3S2-216ENST00000617003 GARTP22102 1010 aa17.8■□□□□ 0.44
AP3S2-216ENST00000617003 ENOX2Q16206 610 aaKnown RBP17.8■□□□□ 0.44
AP3S2-216ENST00000617003 ERCC4Q92889 916 aaPredicted RBP17.8■□□□□ 0.44
AP3S2-216ENST00000617003 PAAF1Q9BRP4 392 aa17.8■□□□□ 0.44
AP3S2-216ENST00000617003 CBWD1Q9BRT8 395 aa17.8■□□□□ 0.44
AP3S2-216ENST00000617003 SPTBN5Q9NRC6 3674 aaKnown RBP17.8■□□□□ 0.44
AP3S2-216ENST00000617003 ANK1P16157 1881 aa17.8■□□□□ 0.44
AP3S2-216ENST00000617003 TTC26A0AVF1 554 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 CASTOR2A6NHX0 329 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 F8W810 466 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 TGFB1I1O43294 461 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 SLC34A2O95436 690 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 SPAG1Q07617 926 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 BMT2Q1RMZ1 405 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 CRELD2Q6UXH1 353 aaPredicted RBP17.79■□□□□ 0.44
AP3S2-216ENST00000617003 MICAL1Q8TDZ2 1067 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 FAM212AQ96EL1 285 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 SAAL1Q96ER3 474 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 COLEC11Q9BWP8 271 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 PLEKHA5Q9HAU0 1116 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 TLR9Q9NR96 1032 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 MARCH5Q9NX47 278 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 PCDHGC5Q9Y5F6 944 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 UBE4BO95155 1302 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 GOLGA8IPA6NC78 632 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 GOLGA8JA6NMD2 632 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 KINO60870 393 aaKnown RBP17.79■□□□□ 0.44
AP3S2-216ENST00000617003 SOX4Q06945 474 aaPredicted RBP17.79■□□□□ 0.44
AP3S2-216ENST00000617003 KCNB1Q14721 858 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 KNOP1Q1ED39 458 aaKnown RBP17.79■□□□□ 0.44
AP3S2-216ENST00000617003 ARMCX5Q6P1M9 558 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 DDX53Q86TM3 631 aaKnown RBP17.79■□□□□ 0.44
AP3S2-216ENST00000617003 FAM213AQ9BRX8 229 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 GOLGA2P5Q9HBQ8 144 aa17.79■□□□□ 0.44
AP3S2-216ENST00000617003 BRWD1Q9NSI6 2320 aa17.78■□□□□ 0.44
AP3S2-216ENST00000617003 FSCN2O14926 492 aa17.78■□□□□ 0.44
AP3S2-216ENST00000617003 CLIC2O15247 247 aa17.78■□□□□ 0.44
AP3S2-216ENST00000617003 LDHAP00338 332 aaKnown RBP17.78■□□□□ 0.44
AP3S2-216ENST00000617003 ADRB2P07550 413 aa17.78■□□□□ 0.44
AP3S2-216ENST00000617003 PPP2R3AQ06190 1150 aa17.78■□□□□ 0.44
AP3S2-216ENST00000617003 TMC7Q7Z402 723 aa17.78■□□□□ 0.44
AP3S2-216ENST00000617003 ELOA2Q8IYF1 753 aaPredicted RBP17.78■□□□□ 0.44
AP3S2-216ENST00000617003 VPS52Q8N1B4 723 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms