RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 SHKBP1Q8TBC3 707 aa5.9□□□□□ -1.46
RFC3-203ENST00000616236 CCHCR1Q8TD31 782 aa5.9□□□□□ -1.46
RFC3-203ENST00000616236 BRIX1Q8TDN6 353 aaKnown RBP5.9□□□□□ -1.46
RFC3-203ENST00000616236 NMD3Q96D46 503 aaKnown RBP5.9□□□□□ -1.46
RFC3-203ENST00000616236 ZBTB10Q96DT7 871 aa5.9□□□□□ -1.46
RFC3-203ENST00000616236 SNX22Q96L94 193 aa5.9□□□□□ -1.46
RFC3-203ENST00000616236 TRIM54Q9BYV2 358 aa5.9□□□□□ -1.46
RFC3-203ENST00000616236 OR10A5Q9H207 317 aa5.9□□□□□ -1.46
RFC3-203ENST00000616236 ADAM7Q9H2U9 754 aa5.9□□□□□ -1.46
RFC3-203ENST00000616236 WASH6PQ9NQA3 447 aa5.9□□□□□ -1.46
RFC3-203ENST00000616236 SERHLQ9NQF3 203 aa5.9□□□□□ -1.46
RFC3-203ENST00000616236 TBC1D22BQ9NU19 505 aa5.9□□□□□ -1.46
RFC3-203ENST00000616236 DTLQ9NZJ0 730 aa5.9□□□□□ -1.46
RFC3-203ENST00000616236 RBPJLQ9UBG7 517 aa5.9□□□□□ -1.46
RFC3-203ENST00000616236 NUDT5Q9UKK9 219 aa5.9□□□□□ -1.46
RFC3-203ENST00000616236 A6NLC8 198 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 ZNF839A8K0R7 811 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 K7ENM7 598 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 AREL1O15033 823 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 CYP26A1O43174 497 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 AHSGP02765 367 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 ANXA2P07355 339 aaKnown RBP5.89□□□□□ -1.47
RFC3-203ENST00000616236 ENO2P09104 434 aaPredicted RBP5.89□□□□□ -1.47
RFC3-203ENST00000616236 ATP1A3P13637 1013 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 ECHS1P30084 290 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 TUBP50607 506 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 ARFIP2P53365 341 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 ANTXR2P58335 489 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 PFKPQ01813 784 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 CREMQ03060 361 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 CD69Q07108 199 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 IKZF1Q13422 519 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 PTK2BQ14289 1009 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 CNKSR3Q6P9H4 555 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 ABHD15Q6UXT9 468 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 C4orf50Q6ZRC1 276 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 MOGAT3Q86VF5 341 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 LRRTM4Q86VH4 590 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 PCYOX1LQ8NBM8 494 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 SIMC1Q8NDZ2 872 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 IFI44Q8TCB0 444 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 IPO4Q8TEX9 1081 aaKnown RBP5.89□□□□□ -1.47
RFC3-203ENST00000616236 KBTBD7Q8WVZ9 684 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 MAML1Q92585 1016 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 TOE1Q96GM8 510 aaKnown RBP5.89□□□□□ -1.47
RFC3-203ENST00000616236 SERINC2Q96SA4 455 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 BTBD2Q9BX70 525 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 MRPL46Q9H2W6 279 aaKnown RBP5.89□□□□□ -1.47
RFC3-203ENST00000616236 TM7SF3Q9NS93 570 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 IGSF9Q9P2J2 1179 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 MAGEL2Q9UJ55 1249 aa5.89□□□□□ -1.47
RFC3-203ENST00000616236 A0A1W2PR48 441 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 FAM234BA2RU67 622 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 TRIM43BA6NCK2 446 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 B4E171 279 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 NT5C1B-RDH14C9J2C7 533 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 F8W031 263 aaPredicted RBP5.88□□□□□ -1.47
RFC3-203ENST00000616236 PODXLO00592 558 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 THAP12O43422 761 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 PRAMEF4O60810 478 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 TNFRSF6BO95407 300 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 MT-ND5P03915 603 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 AMY1AP04745 511 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 DBHP09172 617 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 HDCP19113 662 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 PRDX5P30044 214 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 TSPAN7P41732 249 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 PER3P56645 1201 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 CHRNEQ04844 493 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 PRKG2Q13237 762 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 FAM110CQ1W6H9 321 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 CCDC96Q2M329 555 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 CCDC184Q52MB2 194 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 FBXO47Q5MNV8 452 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 AGAP9Q5VTM2 703 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 RRAGBQ5VZM2 374 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 ZNF787Q6DD87 383 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 FBXO38Q6PIJ6 1188 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 TEPPQ6URK8 271 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 CATSPERGQ6ZRH7 1159 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 PRR23CQ6ZRP0 262 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 PROSER1Q86XN7 944 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 SPPL2CQ8IUH8 684 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 ADGRG2Q8IZP9 1017 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 ZGPATQ8N5A5 531 aaKnown RBP5.88□□□□□ -1.47
RFC3-203ENST00000616236 OR5AN1Q8NGI8 311 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 OR6B3Q8NGW1 331 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 PPP1R14CQ8TAE6 165 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 WDR48Q8TAF3 677 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 CYP2W1Q8TAV3 490 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 FAM71BQ8TC56 605 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 STYXQ8WUJ0 223 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 TP53INP1Q96A56 240 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 TRIM43Q96BQ3 446 aaPredicted RBP5.88□□□□□ -1.47
RFC3-203ENST00000616236 ALPK1Q96QP1 1244 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 GDF15Q99988 308 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 PDCD2LQ9BRP1 358 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 CENPOQ9BU64 300 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 C1orf43Q9BWL3 253 aa5.88□□□□□ -1.47
RFC3-203ENST00000616236 HAPLN2Q9GZV7 340 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms