RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 PLCB3Q01970 1234 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 PPP2R5EQ16537 467 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 STK32AQ8WU08 396 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 PCDHB18PQ96TA0 734 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 ANKRD2Q9GZV1 360 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 RMI1Q9H9A7 625 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 AAASQ9NRG9 546 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 CNOT7Q9UIV1 285 aaKnown RBP14.03□□□□□ -0.16
MSH6-214ENST00000616033 ANAPC7Q9UJX3 599 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 R3HDM2Q9Y2K5 976 aaKnown RBP14.03□□□□□ -0.16
MSH6-214ENST00000616033 DOCK2Q92608 1830 aa14.03□□□□□ -0.16
MSH6-214ENST00000616033 FAM86B1E9PN63 330 aa14.02□□□□□ -0.16
MSH6-214ENST00000616033 PI4K2BG5E9Z4 385 aa14.02□□□□□ -0.16
MSH6-214ENST00000616033 BAG2O95816 211 aa14.02□□□□□ -0.16
MSH6-214ENST00000616033 FAM86B2P0C5J1 330 aa14.02□□□□□ -0.16
MSH6-214ENST00000616033 ATP5DP30049 168 aa14.02□□□□□ -0.16
MSH6-214ENST00000616033 PEX5P50542 639 aa14.02□□□□□ -0.16
MSH6-214ENST00000616033 WDR4P57081 412 aaKnown RBP14.02□□□□□ -0.16
MSH6-214ENST00000616033 IGBP1P78318 339 aa14.02□□□□□ -0.16
MSH6-214ENST00000616033 KHDC1Q4VXA5 237 aaKnown RBP14.02□□□□□ -0.16
MSH6-214ENST00000616033 ANKMY2Q8IV38 441 aa14.02□□□□□ -0.16
MSH6-214ENST00000616033 VPS52Q8N1B4 723 aa14.02□□□□□ -0.16
MSH6-214ENST00000616033 DHX38Q92620 1227 aaKnown RBP14.02□□□□□ -0.16
MSH6-214ENST00000616033 ART4Q93070 314 aa14.02□□□□□ -0.16
MSH6-214ENST00000616033 CNKSR1Q969H4 720 aa14.02□□□□□ -0.16
MSH6-214ENST00000616033 MCUR1Q96AQ8 359 aa14.02□□□□□ -0.16
MSH6-214ENST00000616033 DYDC2Q96IM9 177 aa14.02□□□□□ -0.16
MSH6-214ENST00000616033 CHCHD3Q9NX63 227 aaKnown RBP14.02□□□□□ -0.16
MSH6-214ENST00000616033 NINJ2Q9NZG7 142 aa14.02□□□□□ -0.16
MSH6-214ENST00000616033 MAPK13O15264 365 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 KRT36O76013 467 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 TTC4O95801 387 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 TTLL1O95922 423 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 ZSCAN5DPP0CG00 497 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 TPBGLP0DKB5 382 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 SPATA31C1P0DKV0 1188 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 GTF2IP78347 998 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 ARHGAP27Q6ZUM4 889 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 CCNJLQ8IV13 435 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 SNRNP27Q8WVK2 155 aaKnown RBP14.02□□□□□ -0.17
MSH6-214ENST00000616033 ZFP69BQ9UJL9 534 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 O00370 1275 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 ZBTB5O15062 677 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 CFBP00751 764 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 BCRP11274 1271 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 PIK3CAP42336 1068 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 PKN2Q16513 984 aaKnown RBP14.02□□□□□ -0.17
MSH6-214ENST00000616033 RASIP1Q5U651 963 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 DSTYKQ6XUX3 929 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 RHOT2Q8IXI1 618 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 ACSF2Q96CM8 615 aaPredicted RBP14.02□□□□□ -0.17
MSH6-214ENST00000616033 CCDC97Q96F63 343 aaPredicted RBP14.02□□□□□ -0.17
MSH6-214ENST00000616033 EIF2AK1Q9BQI3 630 aaKnown RBP14.02□□□□□ -0.17
MSH6-214ENST00000616033 CCDC77Q9BR77 488 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 SERPINA10Q9UK55 444 aa14.02□□□□□ -0.17
MSH6-214ENST00000616033 ETS2P15036 469 aa14.01□□□□□ -0.17
MSH6-214ENST00000616033 MAGEA10P43363 369 aaPredicted RBP14.01□□□□□ -0.17
MSH6-214ENST00000616033 SERPINB4P48594 390 aa14.01□□□□□ -0.17
MSH6-214ENST00000616033 NPEPPSP55786 919 aa14.01□□□□□ -0.17
MSH6-214ENST00000616033 ZNF543Q08ER8 600 aa14.01□□□□□ -0.17
MSH6-214ENST00000616033 SF3B3Q15393 1217 aaKnown RBP14.01□□□□□ -0.17
MSH6-214ENST00000616033 ASPRV1Q53RT3 343 aa14.01□□□□□ -0.17
MSH6-214ENST00000616033 RTFDC1Q9BY42 306 aaPredicted RBP14.01□□□□□ -0.17
MSH6-214ENST00000616033 CYP39A1Q9NYL5 469 aa14.01□□□□□ -0.17
MSH6-214ENST00000616033 NVLO15381 856 aaKnown RBP14.01□□□□□ -0.17
MSH6-214ENST00000616033 ZBED4O75132 1171 aa14.01□□□□□ -0.17
MSH6-214ENST00000616033 GJB6O95452 261 aa14.01□□□□□ -0.17
MSH6-214ENST00000616033 ALADP13716 330 aa14.01□□□□□ -0.17
MSH6-214ENST00000616033 ATF7P17544 494 aaPredicted RBP14.01□□□□□ -0.17
MSH6-214ENST00000616033 CD58P19256 250 aa14.01□□□□□ -0.17
MSH6-214ENST00000616033 RRM1P23921 792 aa14.01□□□□□ -0.17
MSH6-214ENST00000616033 RPA3P35244 121 aaPredicted RBP14.01□□□□□ -0.17
MSH6-214ENST00000616033 NOP14P78316 857 aaKnown RBP14.01□□□□□ -0.17
MSH6-214ENST00000616033 MTFR1Q15390 333 aa14.01□□□□□ -0.17
MSH6-214ENST00000616033 RINT1Q6NUQ1 792 aa14.01□□□□□ -0.17
MSH6-214ENST00000616033 PASD1Q8IV76 773 aa14.01□□□□□ -0.17
MSH6-214ENST00000616033 SEPT12Q8IYM1 358 aa14.01□□□□□ -0.17
MSH6-214ENST00000616033 SYT2Q8N9I0 419 aaPredicted RBP14.01□□□□□ -0.17
MSH6-214ENST00000616033 ABTB1Q969K4 478 aaPredicted RBP14.01□□□□□ -0.17
MSH6-214ENST00000616033 P2RX7Q99572 595 aaKnown RBP14.01□□□□□ -0.17
MSH6-214ENST00000616033 HERPUD2Q9BSE4 406 aa14.01□□□□□ -0.17
MSH6-214ENST00000616033 TSPYL2Q9H2G4 693 aaPredicted RBP14.01□□□□□ -0.17
MSH6-214ENST00000616033 ESYT2A0FGR8 921 aa14□□□□□ -0.17
MSH6-214ENST00000616033 CAPN9O14815 690 aa14□□□□□ -0.17
MSH6-214ENST00000616033 OAS1P00973 400 aaKnown RBP14□□□□□ -0.17
MSH6-214ENST00000616033 BMP3P12645 472 aa14□□□□□ -0.17
MSH6-214ENST00000616033 ETS1P14921 441 aa14□□□□□ -0.17
MSH6-214ENST00000616033 PSMC4P43686 418 aa14□□□□□ -0.17
MSH6-214ENST00000616033 POLGP54098 1239 aaPredicted RBP14□□□□□ -0.17
MSH6-214ENST00000616033 FASTKD3Q14CZ7 662 aaKnown RBP14□□□□□ -0.17
MSH6-214ENST00000616033 IZUMO3Q5VZ72 239 aa14□□□□□ -0.17
MSH6-214ENST00000616033 BTNL9Q6UXG8 535 aa14□□□□□ -0.17
MSH6-214ENST00000616033 ASRGL1Q7L266 308 aa14□□□□□ -0.17
MSH6-214ENST00000616033 PHC3Q8NDX5 983 aa14□□□□□ -0.17
MSH6-214ENST00000616033 SERPINB12Q96P63 405 aa14□□□□□ -0.17
MSH6-214ENST00000616033 RBM15Q96T37 977 aaKnown RBP eCLIP14□□□□□ -0.178e-10■■□□□ 12.9
MSH6-214ENST00000616033 ZNF219Q9P2Y4 722 aaPredicted RBP14□□□□□ -0.17
MSH6-214ENST00000616033 A0A1B0GUL6 1792 aa14□□□□□ -0.17
MSH6-214ENST00000616033 PLCH1Q4KWH8 1693 aa14□□□□□ -0.17
MSH6-214ENST00000616033 A0A1W2PPM1 405 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms