RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 NXNQ6DKJ4 435 aa9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 DSTYKQ6XUX3 929 aa9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 ZC3H18Q86VM9 953 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 CCDC125Q86Z20 511 aa9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 TEX2Q8IWB9 1127 aa9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 C2orf69Q8N8R5 385 aa9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 TMEM35BQ8NCS4 154 aa9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 PYROXD1Q8WU10 500 aa9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 SLC5A5Q92911 643 aa9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 IDI2Q9BXS1 227 aa9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 PLAGL2Q9UPG8 496 aa9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 TROVE2P10155 538 aaKnown RBP eCLIP9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 KCNJ1P48048 391 aa9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 SYN2Q92777 582 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 FAM163AQ96GL9 167 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 RANBP17Q9H2T7 1088 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 PPP1R9AQ9ULJ8 1098 aa9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 SSX2IPQ9Y2D8 614 aa9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 PABPN1LA6NDY0 278 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 ADCY2Q08462 1091 aa9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 CRY2Q49AN0 593 aa9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 IZUMO3Q5VZ72 239 aa9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 MOXD1Q6UVY6 613 aa9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 MTMR8Q96EF0 704 aa9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 KCNMB3Q9NPA1 279 aa9.5□□□□□ -0.89
PDLIM5-222ENST00000615540 TCHHQ07283 1943 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 FRMD3A2A2Y4 597 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 F8VZ95 297 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 ZBED1O96006 694 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 P3H1Q32P28 736 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 CBWD6Q4V339 395 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 CBWD3Q5JTY5 395 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 CBWD5Q5RIA9 395 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 C6orf118Q5T5N4 469 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 TWF2Q6IBS0 349 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 RWDD4Q6NW29 188 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 VWA5AO00534 786 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 H2AFXP16104 143 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 ARSEP51690 589 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 PPP2R2AP63151 447 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 SARNPP82979 210 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 NAA25Q14CX7 972 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 SRRM1Q8IYB3 904 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 CCDC33Q8N5R6 958 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 HDAC7Q8WUI4 952 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 C2orf40Q9H1Z8 148 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 LRRC4Q9HBW1 653 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 AGAP1Q9UPQ3 857 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 BAZ2BQ9UIF8 2168 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 IGSF9BQ9UPX0 1349 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 ZSCAN5CA6NGD5 496 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 PDIA2Q13087 525 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 RCN2Q14257 317 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 DUOXA2Q1HG44 320 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 ATF7IP2Q5U623 682 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 FAM47EQ6ZV65 393 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 RSRC2Q7L4I2 434 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 NLRP14Q86W24 1093 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 RBM41Q96IZ5 413 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 MTMR12Q9C0I1 747 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 NAGPAQ9UK23 515 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 SART1O43290 800 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 TMEM253P0C7T8 217 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 ZNF286BP0CG31 522 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 KIF22Q14807 665 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 CENPUQ71F23 418 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 RHOT1Q8IXI2 618 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 ZNF507Q8TCN5 953 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 TATDN2Q93075 761 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 SHISA4Q96DD7 197 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 TIPINQ9BVW5 301 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 PDGFDQ9GZP0 370 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 FIS1Q9Y3D6 152 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 ALG6Q9Y672 507 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 ANKRD63C9JTQ0 380 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 SASH3O75995 380 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 VTNP04004 478 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 KITP10721 976 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 RPS12P25398 132 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 ARL4AP40617 200 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 RNASELQ05823 741 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 AADACL2Q6P093 401 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 RAPH1Q70E73 1250 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 IL31RAQ8NI17 732 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 ATG4AQ8WYN0 398 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 GPRASP2Q96D09 838 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 SLITRK6Q9H5Y7 841 aa9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 PIN4Q9Y237 131 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-222ENST00000615540 PDGFRBP09619 1106 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 NOP14P78316 857 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 KIAA1755Q5JYT7 1200 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 C1orf131Q8NDD1 294 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 METTL5Q9NRN9 209 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 ASNSD1Q9NWL6 643 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 PKD1L3Q7Z443 1732 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 YDJCA8MPS7 323 aa9.48□□□□□ -0.89
PDLIM5-222ENST00000615540 TRIM68Q6AZZ1 485 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms