RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 DNAJC18Q9H819 358 aa12.52□□□□□ -0.4
CDH5-208ENST00000614547 NID2Q14112 1375 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 GJB6O95452 261 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 KRT1P04264 644 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 ENO1P06733 434 aaKnown RBP12.52□□□□□ -0.41
CDH5-208ENST00000614547 ZSCAN5DPP0CG00 497 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 MFAP3P55082 362 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 BASP1P80723 227 aaKnown RBP12.52□□□□□ -0.41
CDH5-208ENST00000614547 THOC5Q13769 683 aaKnown RBP12.52□□□□□ -0.41
CDH5-208ENST00000614547 ZDHHC24Q6UX98 284 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 NLRP9Q7RTR0 991 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 PIGWQ7Z7B1 504 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 CCDC125Q86Z20 511 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 CYP4X1Q8N118 509 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 TBC1D22AQ8WUA7 517 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 POMGNT1Q8WZA1 660 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 WNT8AQ9H1J5 351 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 C10orf88Q9H8K7 445 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 DDX3YO15523 660 aaKnown RBP12.52□□□□□ -0.41
CDH5-208ENST00000614547 CHRNA5P30532 468 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 MAGEA4P43358 317 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 PPP2R5CQ13362 524 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 WDR44Q5JSH3 913 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 LIN9Q5TKA1 542 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 BSPRYQ5W0U4 402 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 CRELD2Q6UXH1 353 aaPredicted RBP12.52□□□□□ -0.41
CDH5-208ENST00000614547 ZNF483Q8TF39 744 aaPredicted RBP12.52□□□□□ -0.41
CDH5-208ENST00000614547 ARMCX1Q9P291 453 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 TMEM59LQ9UK28 342 aa12.52□□□□□ -0.41
CDH5-208ENST00000614547 ATF5Q9Y2D1 282 aaPredicted RBP12.52□□□□□ -0.41
CDH5-208ENST00000614547 BAZ2AQ9UIF9 1905 aaKnown RBP12.52□□□□□ -0.41
CDH5-208ENST00000614547 TTC4O95801 387 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 GAP43P17677 238 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 PTDSS1P48651 473 aaKnown RBP12.51□□□□□ -0.41
CDH5-208ENST00000614547 ARSEP51690 589 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 ARFIP2P53365 341 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 RINT1Q6NUQ1 792 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 MIS18BP1Q6P0N0 1132 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 C16orf86Q6ZW13 317 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 AGGF1Q8N302 714 aaeCLIP12.51□□□□□ -0.41
CDH5-208ENST00000614547 CBWD1Q9BRT8 395 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 PDGFDQ9GZP0 370 aaPredicted RBP12.51□□□□□ -0.41
CDH5-208ENST00000614547 CYP4F11Q9HBI6 524 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 RAB20Q9NX57 234 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.51□□□□□ -0.41
CDH5-208ENST00000614547 HEY2Q9UBP5 337 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 M0R2N6 131 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 PFDN1O60925 122 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 ATP9AO75110 1047 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 BANF1O75531 89 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 MT-ND3P03897 115 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 NUDT17P0C025 328 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 MARK3P27448 753 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 PKN2Q16513 984 aaKnown RBP12.51□□□□□ -0.41
CDH5-208ENST00000614547 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.51□□□□□ -0.41
CDH5-208ENST00000614547 XKR9Q5GH70 373 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 PYROXD1Q8WU10 500 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 CENPTQ96BT3 561 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 PAGR1Q9BTK6 254 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 KIFC3Q9BVG8 833 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 RNPEPL1Q9HAU8 725 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 AGPAT3Q9NRZ7 376 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 NINJ2Q9NZG7 142 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 SLC12A4Q9UP95 1085 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 C5P01031 1676 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.51□□□□□ -0.41
CDH5-208ENST00000614547 RTN2O75298 545 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 KRT4P19013 534 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 CALB2P22676 271 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 PGM1P36871 562 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 SHROOM1Q2M3G4 852 aaPredicted RBP12.51□□□□□ -0.41
CDH5-208ENST00000614547 CKAP2Q8WWK9 683 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 SERPINB12Q96P63 405 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 TRIM55Q9BYV6 548 aa12.51□□□□□ -0.41
CDH5-208ENST00000614547 CCDC189A1A4V9 331 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 SRRM3A6NNA2 597 aaPredicted RBP12.5□□□□□ -0.41
CDH5-208ENST00000614547 I3L4J1 428 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 EML1O00423 815 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 KRT36O76013 467 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 ETS2P15036 469 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 CD19P15391 556 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 VPS72Q15906 364 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 SNX30Q5VWJ9 437 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 FAM43BQ6ZT52 329 aaPredicted RBP12.5□□□□□ -0.41
CDH5-208ENST00000614547 RSAD2Q8WXG1 361 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 SLC13A1Q9BZW2 595 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 PIDD1Q9HB75 910 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 ZDHHC18Q9NUE0 388 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 GRHL1Q9NZI5 618 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 C2orf71A6NGG8 1288 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 F5H423 210 aaPredicted RBP12.5□□□□□ -0.41
CDH5-208ENST00000614547 UNC5CO95185 931 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 MRPS35P82673 323 aaKnown RBP12.5□□□□□ -0.41
CDH5-208ENST00000614547 PPATQ06203 517 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 BNIP1Q12981 228 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 ZNF268Q14587 947 aaPredicted RBP12.5□□□□□ -0.41
CDH5-208ENST00000614547 FAM13CQ8NE31 585 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 STK32AQ8WU08 396 aa12.5□□□□□ -0.41
CDH5-208ENST00000614547 ROPN1BQ9BZX4 212 aaPredicted RBP12.5□□□□□ -0.41
CDH5-208ENST00000614547 ROPN1Q9HAT0 212 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms