RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 GPR158Q5T848 1215 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 TMEM214Q6NUQ4 689 aaKnown RBP3.25□□□□□ -1.89
CBWD3-209ENST00000614377 TUBA3EQ6PEY2 450 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 PLEKHM3Q6ZWE6 761 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 KRT74Q7RTS7 529 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 KDELC2Q7Z4H8 507 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 ITPRIPQ8IWB1 547 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.25□□□□□ -1.89
CBWD3-209ENST00000614377 ANKRD53Q8N9V6 530 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 HCAR2Q8TDS4 363 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 HDAC11Q96DB2 347 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 CCDC42Q96M95 316 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 CLIC6Q96NY7 704 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 CATSPER2Q96P56 530 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 ZSCAN10Q96SZ4 725 aaPredicted RBP3.25□□□□□ -1.89
CBWD3-209ENST00000614377 SEC62Q99442 399 aaKnown RBP3.25□□□□□ -1.89
CBWD3-209ENST00000614377 NDNQ99608 321 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 GPATCH1Q9BRR8 931 aaKnown RBP3.25□□□□□ -1.89
CBWD3-209ENST00000614377 SLC26A6Q9BXS9 759 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 TRIM5Q9C035 493 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 EHD1Q9H4M9 534 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 PSTPIP2Q9H939 334 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 PARVBQ9HBI1 364 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 CCDC177Q9NQR7 707 aaPredicted RBP3.25□□□□□ -1.89
CBWD3-209ENST00000614377 DDX18Q9NVP1 670 aaKnown RBP3.25□□□□□ -1.89
CBWD3-209ENST00000614377 GGA3Q9NZ52 723 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 ZNF624Q9P2J8 865 aaPredicted RBP3.25□□□□□ -1.89
CBWD3-209ENST00000614377 MTRF1LQ9UGC7 380 aaKnown RBP3.25□□□□□ -1.89
CBWD3-209ENST00000614377 HPCAL4Q9UM19 191 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 L1RE1Q9UN81 338 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 RTL1A6NKG5 1358 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 ATP10AO60312 1499 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 PI4K2BG5E9Z4 385 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 H7C0S8 307 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 KRIT1O00522 736 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 ZSCAN12O43309 604 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 XPOTO43592 962 aaKnown RBP3.25□□□□□ -1.89
CBWD3-209ENST00000614377 DYRK3O43781 588 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 SUPT3HO75486 399 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 CD4P01730 458 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 CYP2C9P11712 490 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 MSX1P28360 303 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 NOS3P29474 1203 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 BLVRAP53004 296 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 CAP1Q01518 475 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 UBXN1Q04323 297 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 GALNT1Q10472 559 aaPredicted RBP3.25□□□□□ -1.89
CBWD3-209ENST00000614377 FAPQ12884 760 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 DRP2Q13474 957 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 MTMR1Q13613 665 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 RFTN1Q14699 578 aaPredicted RBP3.25□□□□□ -1.89
CBWD3-209ENST00000614377 STK11Q15831 433 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 SNCBQ16143 134 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 ZNF792Q3KQV3 632 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 GNASQ5JWF2 1037 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 DAB2IPQ5VWQ8 1189 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 SLC30A10Q6XR72 485 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 LIMS2Q7Z4I7 341 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 LRRC71Q8N4P6 559 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 ZNF565Q8N9K5 539 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 KCNH5Q8NCM2 988 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 ATL1Q8WXF7 558 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 FERMT2Q96AC1 680 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 C11orf24Q96F05 449 aaPredicted RBP3.25□□□□□ -1.89
CBWD3-209ENST00000614377 CCDC106Q9BWC9 280 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 EHMT1Q9H9B1 1298 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 AGO4Q9HCK5 861 aaKnown RBP3.25□□□□□ -1.89
CBWD3-209ENST00000614377 CYP4F12Q9HCS2 524 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 ASNSD1Q9NWL6 643 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 IL37Q9NZH6 218 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 HSFX1Q9UBD0 423 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 ORC3Q9UBD5 711 aaPredicted RBP3.25□□□□□ -1.89
CBWD3-209ENST00000614377 ANAPC5Q9UJX4 755 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 GGA2Q9UJY4 613 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 DDX19BQ9UMR2 479 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 EDARQ9UNE0 448 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 ZBTB1Q9Y2K1 713 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 HEY1Q9Y5J3 304 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 NR2E3Q9Y5X4 410 aa3.25□□□□□ -1.89
CBWD3-209ENST00000614377 CETN3O15182 167 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 GREM1O60565 184 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 PDE8AO60658 829 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 ZC3H11AO75152 810 aaKnown RBP eCLIP3.24□□□□□ -1.89
CBWD3-209ENST00000614377 SERPINB7O75635 380 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 RFPL3O75679 317 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 IL33O95760 270 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 ECDO95905 644 aaPredicted RBP3.24□□□□□ -1.89
CBWD3-209ENST00000614377 DDX5P17844 614 aaKnown RBP3.24□□□□□ -1.89
CBWD3-209ENST00000614377 ARF4P18085 180 aaPredicted RBP3.24□□□□□ -1.89
CBWD3-209ENST00000614377 M6PRP20645 277 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 GRIK1P39086 918 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 AARSP49588 968 aaKnown RBP eCLIP3.24□□□□□ -1.89
CBWD3-209ENST00000614377 MCM2P49736 904 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 ATXN1P54253 815 aaKnown RBP3.24□□□□□ -1.89
CBWD3-209ENST00000614377 MLLT6P55198 1093 aaPredicted RBP3.24□□□□□ -1.89
CBWD3-209ENST00000614377 CCNA1P78396 465 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 MRPS15P82914 257 aaKnown RBP3.24□□□□□ -1.89
CBWD3-209ENST00000614377 ACTN3Q08043 901 aaPredicted RBP3.24□□□□□ -1.89
CBWD3-209ENST00000614377 IFFO1Q0D2I5 559 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 EPHA7Q15375 998 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms