RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 NAGPAQ9UK23 515 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 ARL2BPQ9Y2Y0 163 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 LRRC42Q9Y546 428 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 IVNS1ABPQ9Y6Y0 642 aa23.5■■□□□ 1.35
POLR2J3-220ENST00000613744 PIK3CDO00329 1044 aa23.49■■□□□ 1.35
POLR2J3-220ENST00000613744 MRPS35P82673 323 aaKnown RBP23.49■■□□□ 1.35
POLR2J3-220ENST00000613744 MFSD5Q6N075 450 aa23.49■■□□□ 1.35
POLR2J3-220ENST00000613744 NT5DC3Q86UY8 548 aa23.49■■□□□ 1.35
POLR2J3-220ENST00000613744 RXFP1Q9HBX9 757 aa23.49■■□□□ 1.35
POLR2J3-220ENST00000613744 ADAM22Q9P0K1 906 aa23.49■■□□□ 1.35
POLR2J3-220ENST00000613744 RASAL2Q9UJF2 1139 aa23.49■■□□□ 1.35
POLR2J3-220ENST00000613744 MAPK4P31152 587 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 COPB2P35606 906 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 RAB27AP51159 221 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 SP3Q02447 781 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 CCDC15Q0P6D6 951 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 LBRQ14739 615 aaKnown RBP23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 TAF11Q15544 211 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 IRF2BP2Q7Z5L9 587 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 PLEKHH3Q7Z736 793 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 ZC3H3Q8IXZ2 948 aaKnown RBP23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 ZBTB10Q96DT7 871 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 OSBPL1AQ9BXW6 950 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 AZI2Q9H6S1 392 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 DAAM1Q9Y4D1 1078 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 ENO4A6NNW6 628 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 GFPT2O94808 682 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 SHBGP04278 402 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 KRT16P08779 473 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 CCNB1P14635 433 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 ATP4AP20648 1035 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 ADORA2AP29274 412 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 FXR2P51116 673 aaKnown RBP eCLIP23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 PPARDQ03181 441 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 PTK2Q05397 1052 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 CWF19L1Q69YN2 538 aaKnown RBP23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 ALKBH5Q6P6C2 394 aaKnown RBP23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 VPS36Q86VN1 386 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 RAD54LQ92698 747 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 ROPN1BQ9BZX4 212 aaPredicted RBP23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 ROPN1Q9HAT0 212 aaPredicted RBP23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 LRRC4CQ9HCJ2 640 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 DOCK3Q8IZD9 2030 aa23.48■■□□□ 1.35
POLR2J3-220ENST00000613744 GPR25O00155 361 aa23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 NPTXRO95502 500 aa23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 ABL2P42684 1182 aa23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 PSMC4P43686 418 aa23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 DR1Q01658 176 aa23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 ROR2Q01974 943 aaKnown RBP23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 AP3B2Q13367 1082 aa23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 SGSM1Q2NKQ1 1148 aa23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 LMNTD2Q8IXW0 634 aa23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 CFAP61Q8NHU2 1237 aa23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 RNF25Q96BH1 459 aaPredicted RBP23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 AMFRQ9UKV5 643 aa23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 CENPFP49454 3210 aa23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 RBBP6Q7Z6E9 1792 aaKnown RBP23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 TNPO2O14787 897 aaKnown RBP23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 H2AFZP0C0S5 128 aa23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 EIF2AK2P19525 551 aaKnown RBP23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 TECP42680 631 aa23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 H2AFVQ71UI9 128 aa23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 ZNF571Q7Z3V5 609 aaPredicted RBP23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 CDK5RAP3Q96JB5 506 aa23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 PNMA5Q96PV4 448 aa23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 CFHR5Q9BXR6 569 aa23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 CELF4Q9BZC1 486 aaKnown RBP23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 YIPF3Q9GZM5 350 aa23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 WBP1LQ9NX94 342 aa23.47■■□□□ 1.35
POLR2J3-220ENST00000613744 PLXNB2O15031 1838 aa23.46■■□□□ 1.35
POLR2J3-220ENST00000613744 PFASO15067 1338 aa23.46■■□□□ 1.35
POLR2J3-220ENST00000613744 EVI5O60447 810 aa23.46■■□□□ 1.35
POLR2J3-220ENST00000613744 HIP1RO75146 1068 aa23.46■■□□□ 1.35
POLR2J3-220ENST00000613744 RPS6KA3P51812 740 aa23.46■■□□□ 1.35
POLR2J3-220ENST00000613744 PARP6Q2NL67 630 aa23.46■■□□□ 1.35
POLR2J3-220ENST00000613744 DAAM2Q86T65 1068 aa23.46■■□□□ 1.35
POLR2J3-220ENST00000613744 CD99L2Q8TCZ2 262 aa23.46■■□□□ 1.35
POLR2J3-220ENST00000613744 RMDN3Q96TC7 470 aa23.46■■□□□ 1.35
POLR2J3-220ENST00000613744 RAB34Q9BZG1 259 aa23.46■■□□□ 1.35
POLR2J3-220ENST00000613744 ZNFX1Q9P2E3 1918 aaKnown RBP23.46■■□□□ 1.35
POLR2J3-220ENST00000613744 TDP2O95551 362 aa23.45■■□□□ 1.35
POLR2J3-220ENST00000613744 PAPOLAP51003 745 aaKnown RBP23.45■■□□□ 1.35
POLR2J3-220ENST00000613744 SLC5A9Q2M3M2 681 aa23.45■■□□□ 1.35
POLR2J3-220ENST00000613744 TSC22D3Q99576 134 aa23.45■■□□□ 1.35
POLR2J3-220ENST00000613744 TRIM51Q9BSJ1 452 aa23.45■■□□□ 1.35
POLR2J3-220ENST00000613744 CARD9Q9H257 536 aa23.45■■□□□ 1.35
POLR2J3-220ENST00000613744 MTRF1LQ9UGC7 380 aaKnown RBP23.45■■□□□ 1.35
POLR2J3-220ENST00000613744 ASTN1O14525 1302 aa23.45■■□□□ 1.34
POLR2J3-220ENST00000613744 LRRD1A4D1F6 860 aa23.45■■□□□ 1.34
POLR2J3-220ENST00000613744 ATP5HO75947 161 aa23.45■■□□□ 1.34
POLR2J3-220ENST00000613744 FOSP01100 380 aaPredicted RBP23.45■■□□□ 1.34
POLR2J3-220ENST00000613744 GHRHRQ02643 423 aa23.45■■□□□ 1.34
POLR2J3-220ENST00000613744 ARID5AQ03989 594 aa23.45■■□□□ 1.34
POLR2J3-220ENST00000613744 PPP4R3CPQ6ZMV5 832 aa23.45■■□□□ 1.34
POLR2J3-220ENST00000613744 ZNF296Q8WUU4 475 aaPredicted RBP23.45■■□□□ 1.34
POLR2J3-220ENST00000613744 FAM210AQ96ND0 272 aa23.45■■□□□ 1.34
POLR2J3-220ENST00000613744 RUNDC3BQ96NL0 473 aa23.45■■□□□ 1.34
POLR2J3-220ENST00000613744 SAGE1Q9NXZ1 904 aa23.45■■□□□ 1.34
POLR2J3-220ENST00000613744 GNAZP19086 355 aa23.44■■□□□ 1.34
POLR2J3-220ENST00000613744 CNGA1P29973 690 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms