RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 CNGA4Q8IV77 575 aa21.94■■□□□ 1.1
CPNE9-205ENST00000613455 DIS3LQ8TF46 1054 aaKnown RBP21.94■■□□□ 1.1
CPNE9-205ENST00000613455 COL6A1P12109 1028 aa21.94■■□□□ 1.1
CPNE9-205ENST00000613455 TNNI1P19237 187 aa21.94■■□□□ 1.1
CPNE9-205ENST00000613455 GRM5P41594 1212 aa21.94■■□□□ 1.1
CPNE9-205ENST00000613455 CCZ1BP86790 482 aa21.94■■□□□ 1.1
CPNE9-205ENST00000613455 CCZ1P86791 482 aaPredicted RBP21.94■■□□□ 1.1
CPNE9-205ENST00000613455 POU5F1Q01860 360 aaKnown RBP21.94■■□□□ 1.1
CPNE9-205ENST00000613455 LPIN1Q14693 890 aa21.94■■□□□ 1.1
CPNE9-205ENST00000613455 APBB1IPQ7Z5R6 666 aaPredicted RBP21.94■■□□□ 1.1
CPNE9-205ENST00000613455 CCDC51Q96ER9 411 aa21.94■■□□□ 1.1
CPNE9-205ENST00000613455 INTS2Q9H0H0 1204 aaKnown RBP21.94■■□□□ 1.1
CPNE9-205ENST00000613455 RPF1Q9H9Y2 349 aaKnown RBP21.94■■□□□ 1.1
CPNE9-205ENST00000613455 ERVK-5Q9HDB9 667 aa21.94■■□□□ 1.1
CPNE9-205ENST00000613455 COQ4Q9Y3A0 265 aa21.94■■□□□ 1.1
CPNE9-205ENST00000613455 KIAA0100Q14667 2235 aaKnown RBP21.94■■□□□ 1.1
CPNE9-205ENST00000613455 LRRN2O75325 713 aa21.93■■□□□ 1.1
CPNE9-205ENST00000613455 GHRP10912 638 aa21.93■■□□□ 1.1
CPNE9-205ENST00000613455 KLHDC7AQ5VTJ3 777 aa21.93■■□□□ 1.1
CPNE9-205ENST00000613455 TDRD10Q5VZ19 366 aaKnown RBP21.93■■□□□ 1.1
CPNE9-205ENST00000613455 WDR49Q8IV35 697 aa21.93■■□□□ 1.1
CPNE9-205ENST00000613455 ABHD10Q9NUJ1 306 aa21.93■■□□□ 1.1
CPNE9-205ENST00000613455 MROH7Q68CQ1 1323 aa21.93■■□□□ 1.1
CPNE9-205ENST00000613455 C4BPAP04003 597 aaKnown RBP21.92■■□□□ 1.1
CPNE9-205ENST00000613455 CD52P31358 61 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 KRT9P35527 623 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 ATN1P54259 1190 aaPredicted RBP21.92■■□□□ 1.1
CPNE9-205ENST00000613455 SLC10A6Q3KNW5 377 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 ZACNQ401N2 412 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 SLC39A5Q6ZMH5 540 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 TMEM139Q8IV31 216 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 EFCAB13Q8IY85 973 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 OR5B17Q8NGF7 314 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 CAGE1Q8TC20 777 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 TAS1R2Q8TE23 839 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 BAP1Q92560 729 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 SEMA4DQ92854 862 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 FAM212AQ96EL1 285 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 PANX2Q96RD6 677 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 NXF3Q9H4D5 531 aaKnown RBP21.92■■□□□ 1.1
CPNE9-205ENST00000613455 CEP72Q9P209 647 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 LUC7L2Q9Y383 392 aaKnown RBP21.92■■□□□ 1.1
CPNE9-205ENST00000613455 TRIP11Q15643 1979 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 GPR182O15218 404 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 PQBP1O60828 265 aaKnown RBP21.92■■□□□ 1.1
CPNE9-205ENST00000613455 IL18RAPO95256 599 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 ZBED6P86452 979 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 CETN1Q12798 172 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 NFX1Q12986 1120 aaKnown RBP21.92■■□□□ 1.1
CPNE9-205ENST00000613455 MBTPS1Q14703 1052 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 SURF1Q15526 300 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 ANKRD33Q7Z3H0 272 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 EHBP1Q8NDI1 1231 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 DNAJC7Q99615 494 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 EDEM3Q9BZQ6 932 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 TMX1Q9H3N1 280 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 PADI3Q9ULW8 664 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 HES2Q9Y543 173 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 SQORQ9Y6N5 450 aa21.92■■□□□ 1.1
CPNE9-205ENST00000613455 LACTBL1A8MY62 500 aa21.91■■□□□ 1.1
CPNE9-205ENST00000613455 UCHL3P15374 230 aa21.91■■□□□ 1.1
CPNE9-205ENST00000613455 POLR2FP61218 127 aaKnown RBP21.91■■□□□ 1.1
CPNE9-205ENST00000613455 PAK2Q13177 524 aa21.91■■□□□ 1.1
CPNE9-205ENST00000613455 ANKLE1Q8NAG6 615 aa21.91■■□□□ 1.1
CPNE9-205ENST00000613455 FBXL13Q8NEE6 735 aa21.91■■□□□ 1.1
CPNE9-205ENST00000613455 ACAP3Q96P50 834 aa21.91■■□□□ 1.1
CPNE9-205ENST00000613455 CCDC94Q9BW85 323 aaPredicted RBP21.91■■□□□ 1.1
CPNE9-205ENST00000613455 TRIM6Q9C030 488 aaPredicted RBP21.91■■□□□ 1.1
CPNE9-205ENST00000613455 SNTG2Q9NY99 539 aa21.91■■□□□ 1.1
CPNE9-205ENST00000613455 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.91■■□□□ 1.1
CPNE9-205ENST00000613455 FBXL5Q9UKA1 691 aa21.91■■□□□ 1.1
CPNE9-205ENST00000613455 AJAP1Q9UKB5 411 aaPredicted RBP21.91■■□□□ 1.1
CPNE9-205ENST00000613455 FHOD1Q9Y613 1164 aa21.91■■□□□ 1.1
CPNE9-205ENST00000613455 TWF2Q6IBS0 349 aaKnown RBP21.9■■□□□ 1.1
CPNE9-205ENST00000613455 MTMR12Q9C0I1 747 aa21.9■■□□□ 1.1
CPNE9-205ENST00000613455 NLRC4Q9NPP4 1024 aa21.9■■□□□ 1.1
CPNE9-205ENST00000613455 CHST12Q9NRB3 414 aa21.9■■□□□ 1.1
CPNE9-205ENST00000613455 PDCD11Q14690 1871 aaKnown RBP21.89■■□□□ 1.1
CPNE9-205ENST00000613455 TANC1Q9C0D5 1861 aa21.89■■□□□ 1.1
CPNE9-205ENST00000613455 VNN1O95497 513 aa21.89■■□□□ 1.1
CPNE9-205ENST00000613455 NFICP08651 508 aa21.89■■□□□ 1.1
CPNE9-205ENST00000613455 FECHP22830 423 aa21.89■■□□□ 1.1
CPNE9-205ENST00000613455 C1orf53Q5VUE5 145 aa21.89■■□□□ 1.1
CPNE9-205ENST00000613455 GJB7Q6PEY0 223 aa21.89■■□□□ 1.1
CPNE9-205ENST00000613455 USP38Q8NB14 1042 aa21.89■■□□□ 1.1
CPNE9-205ENST00000613455 SMG8Q8ND04 991 aaKnown RBP21.89■■□□□ 1.1
CPNE9-205ENST00000613455 NAA15Q9BXJ9 866 aaKnown RBP21.89■■□□□ 1.1
CPNE9-205ENST00000613455 ASB7Q9H672 318 aa21.89■■□□□ 1.1
CPNE9-205ENST00000613455 PRDM10Q9NQV6 1147 aa21.89■■□□□ 1.1
CPNE9-205ENST00000613455 RAB20Q9NX57 234 aa21.89■■□□□ 1.1
CPNE9-205ENST00000613455 APEX2Q9UBZ4 518 aa21.89■■□□□ 1.1
CPNE9-205ENST00000613455 IPPQ9Y573 584 aa21.89■■□□□ 1.1
CPNE9-205ENST00000613455 AP3M2P53677 418 aa21.89■■□□□ 1.09
CPNE9-205ENST00000613455 BIRC3Q13489 604 aa21.89■■□□□ 1.09
CPNE9-205ENST00000613455 TRIM60Q495X7 471 aa21.89■■□□□ 1.09
CPNE9-205ENST00000613455 E4F1Q66K89 784 aaPredicted RBP21.89■■□□□ 1.09
CPNE9-205ENST00000613455 PHLDB3Q6NSJ2 640 aa21.89■■□□□ 1.09
CPNE9-205ENST00000613455 LRRC8DQ7L1W4 858 aa21.89■■□□□ 1.09
CPNE9-205ENST00000613455 CACNA2D4Q7Z3S7 1137 aa21.89■■□□□ 1.09
CPNE9-205ENST00000613455 OR8K1Q8NGG5 319 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms