RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 NCK2O43639 380 aa13.87□□□□□ -0.19
CSTF1-208ENST00000613138 KIF4AO95239 1232 aa13.87□□□□□ -0.19
CSTF1-208ENST00000613138 EFEMP2O95967 443 aa13.87□□□□□ -0.19
CSTF1-208ENST00000613138 GRM5P41594 1212 aa13.87□□□□□ -0.19
CSTF1-208ENST00000613138 MATR3P43243 847 aaKnown RBP eCLIP13.87□□□□□ -0.19
CSTF1-208ENST00000613138 KCNC3Q14003 757 aa13.87□□□□□ -0.19
CSTF1-208ENST00000613138 SMC1AQ14683 1233 aaKnown RBP13.87□□□□□ -0.19
CSTF1-208ENST00000613138 NOLC1Q14978 699 aaKnown RBP eCLIP13.87□□□□□ -0.19
CSTF1-208ENST00000613138 PTPN14Q15678 1187 aa13.87□□□□□ -0.19
CSTF1-208ENST00000613138 RESP18Q5W5W9 173 aa13.87□□□□□ -0.19
CSTF1-208ENST00000613138 CD300LGQ6UXG3 332 aa13.87□□□□□ -0.19
CSTF1-208ENST00000613138 FAM178BQ8IXR5 827 aa13.87□□□□□ -0.19
CSTF1-208ENST00000613138 HACE1Q8IYU2 909 aa13.87□□□□□ -0.19
CSTF1-208ENST00000613138 MRPL43Q8N983 215 aaKnown RBP13.87□□□□□ -0.19
CSTF1-208ENST00000613138 LEO1Q8WVC0 666 aaPredicted RBP13.87□□□□□ -0.19
CSTF1-208ENST00000613138 C18orf25Q96B23 403 aaPredicted RBP13.87□□□□□ -0.19
CSTF1-208ENST00000613138 MSLNLQ96KJ4 702 aa13.87□□□□□ -0.19
CSTF1-208ENST00000613138 SNX27Q96L92 541 aa13.87□□□□□ -0.19
CSTF1-208ENST00000613138 PPP1R10Q96QC0 940 aaKnown RBP13.87□□□□□ -0.19
CSTF1-208ENST00000613138 BLZF1Q9H2G9 400 aa13.87□□□□□ -0.19
CSTF1-208ENST00000613138 MTCL1Q9Y4B5 1905 aaKnown RBP13.87□□□□□ -0.19
CSTF1-208ENST00000613138 SCN1AP35498 2009 aa13.86□□□□□ -0.19
CSTF1-208ENST00000613138 SMIM28A0A1B0GU29 152 aa13.86□□□□□ -0.19
CSTF1-208ENST00000613138 I3L4J1 428 aa13.86□□□□□ -0.19
CSTF1-208ENST00000613138 TOM1L1O75674 476 aa13.86□□□□□ -0.19
CSTF1-208ENST00000613138 THP07101 528 aa13.86□□□□□ -0.19
CSTF1-208ENST00000613138 WEE2P0C1S8 567 aa13.86□□□□□ -0.19
CSTF1-208ENST00000613138 CXCL8P10145 99 aa13.86□□□□□ -0.19
CSTF1-208ENST00000613138 CTSAP10619 480 aa13.86□□□□□ -0.19
CSTF1-208ENST00000613138 MCF2P10911 925 aa13.86□□□□□ -0.19
CSTF1-208ENST00000613138 EPCAMP16422 314 aa13.86□□□□□ -0.19
CSTF1-208ENST00000613138 RPL17P18621 184 aaKnown RBP13.86□□□□□ -0.19
CSTF1-208ENST00000613138 GUCY2FP51841 1108 aa13.86□□□□□ -0.19
CSTF1-208ENST00000613138 MCL1Q07820 350 aa13.86□□□□□ -0.19
CSTF1-208ENST00000613138 TUSC3Q13454 348 aa13.86□□□□□ -0.19
CSTF1-208ENST00000613138 SLC10A6Q3KNW5 377 aa13.86□□□□□ -0.19
CSTF1-208ENST00000613138 FUT10Q6P4F1 479 aa13.86□□□□□ -0.19
CSTF1-208ENST00000613138 ALKAL1Q6UXT8 129 aa13.86□□□□□ -0.19
CSTF1-208ENST00000613138 GLYCTKQ8IVS8 523 aa13.86□□□□□ -0.19
CSTF1-208ENST00000613138 RNF168Q8IYW5 571 aaPredicted RBP13.86□□□□□ -0.19
CSTF1-208ENST00000613138 C12orf76Q8N812 135 aaPredicted RBP13.86□□□□□ -0.19
CSTF1-208ENST00000613138 C3orf58Q8NDZ4 430 aa13.86□□□□□ -0.19
CSTF1-208ENST00000613138 KCNG4Q8TDN1 519 aa13.86□□□□□ -0.19
CSTF1-208ENST00000613138 KHSRPQ92945 711 aaKnown RBP eCLIP13.86□□□□□ -0.19
CSTF1-208ENST00000613138 FAM84AQ96KN4 292 aa13.86□□□□□ -0.19
CSTF1-208ENST00000613138 UHRF1Q96T88 793 aaPredicted RBP13.86□□□□□ -0.19
CSTF1-208ENST00000613138 NGRNQ9NPE2 291 aaKnown RBP13.86□□□□□ -0.19
CSTF1-208ENST00000613138 A0A1B0GVL5 298 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 HNRNPDLO14979 420 aaKnown RBP13.85□□□□□ -0.19
CSTF1-208ENST00000613138 MBTPS2O43462 519 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 FAM189A1O60320 539 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 LILRB3O75022 631 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 PPP1R37O75864 691 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 CNPP09543 421 aaKnown RBP13.85□□□□□ -0.19
CSTF1-208ENST00000613138 AFMP43652 599 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 BRCC3P46736 316 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 LIG4P49917 911 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 CLCNKBP51801 687 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 GTF2BQ00403 316 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 COASYQ13057 564 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 HSP90AA2PQ14568 343 aaPredicted RBP13.85□□□□□ -0.19
CSTF1-208ENST00000613138 SYCE2Q6PIF2 218 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 PRSS55Q6UWB4 352 aaPredicted RBP13.85□□□□□ -0.19
CSTF1-208ENST00000613138 ZNF720Q7Z2F6 126 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 PPP2R3CQ969Q6 453 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 SPATA32Q96LK8 384 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 ACAP3Q96P50 834 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 HERC2P3Q9BVR0 1158 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 CCDC94Q9BW85 323 aaPredicted RBP13.85□□□□□ -0.19
CSTF1-208ENST00000613138 STRA6Q9BX79 667 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 MRPL44Q9H9J2 332 aaKnown RBP13.85□□□□□ -0.19
CSTF1-208ENST00000613138 PANK4Q9NVE7 773 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 KBTBD4Q9NVX7 518 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 TUBGCP4Q9UGJ1 667 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 SERTAD1Q9UHV2 236 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 CD207Q9UJ71 328 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 ADAM28Q9UKQ2 775 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 HCFC2Q9Y5Z7 792 aa13.85□□□□□ -0.19
CSTF1-208ENST00000613138 MYO10Q9HD67 2058 aa13.84□□□□□ -0.19
CSTF1-208ENST00000613138 FRMD3A2A2Y4 597 aa13.84□□□□□ -0.19
CSTF1-208ENST00000613138 CLDN3O15551 220 aa13.84□□□□□ -0.19
CSTF1-208ENST00000613138 PRPF6O94906 941 aaKnown RBP13.84□□□□□ -0.19
CSTF1-208ENST00000613138 SOD2P04179 222 aa13.84□□□□□ -0.19
CSTF1-208ENST00000613138 WNT7BP56706 349 aa13.84□□□□□ -0.19
CSTF1-208ENST00000613138 BECN1Q14457 450 aa13.84□□□□□ -0.19
CSTF1-208ENST00000613138 XKR4Q5GH76 650 aa13.84□□□□□ -0.19
CSTF1-208ENST00000613138 HERC4Q5GLZ8 1057 aaPredicted RBP13.84□□□□□ -0.19
CSTF1-208ENST00000613138 RTP2Q5QGT7 225 aa13.84□□□□□ -0.19
CSTF1-208ENST00000613138 ZPBP2Q6X784 338 aa13.84□□□□□ -0.19
CSTF1-208ENST00000613138 MAP4K3Q8IVH8 894 aa13.84□□□□□ -0.19
CSTF1-208ENST00000613138 KLHL5Q96PQ7 755 aa13.84□□□□□ -0.19
CSTF1-208ENST00000613138 COLEC11Q9BWP8 271 aa13.84□□□□□ -0.19
CSTF1-208ENST00000613138 TRIM9Q9C026 710 aa13.84□□□□□ -0.19
CSTF1-208ENST00000613138 GOLPH3LQ9H4A5 285 aa13.84□□□□□ -0.19
CSTF1-208ENST00000613138 CFAP45Q9UL16 551 aa13.84□□□□□ -0.19
CSTF1-208ENST00000613138 ZMYM2Q9UBW7 1377 aa13.83□□□□□ -0.19
CSTF1-208ENST00000613138 LACTBL1A8MY62 500 aa13.83□□□□□ -0.2
CSTF1-208ENST00000613138 PPEF2O14830 753 aa13.83□□□□□ -0.2
CSTF1-208ENST00000613138 ADAM12O43184 909 aa13.83□□□□□ -0.2
CSTF1-208ENST00000613138 ACTN4O43707 911 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms