RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 XPNPEP1Q9NQW7 623 aa17.69■□□□□ 0.42
CNOT3-208ENST00000613073 PCDHGC5Q9Y5F6 944 aa17.69■□□□□ 0.42
CNOT3-208ENST00000613073 C10orf76Q5T2E6 689 aa17.69■□□□□ 0.42
CNOT3-208ENST00000613073 FAM43BQ6ZT52 329 aaPredicted RBP17.69■□□□□ 0.42
CNOT3-208ENST00000613073 CD302Q8IX05 232 aa17.69■□□□□ 0.42
CNOT3-208ENST00000613073 C12orf56Q8IXR9 622 aa17.69■□□□□ 0.42
CNOT3-208ENST00000613073 KIFAP3Q92845 792 aa17.69■□□□□ 0.42
CNOT3-208ENST00000613073 IWS1Q96ST2 819 aa17.69■□□□□ 0.42
CNOT3-208ENST00000613073 LRRC4CQ9HCJ2 640 aa17.69■□□□□ 0.42
CNOT3-208ENST00000613073 NFASCO94856 1347 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 KIF3CO14782 793 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 AP1G2O75843 785 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 MAGOHP61326 146 aaKnown RBP17.68■□□□□ 0.42
CNOT3-208ENST00000613073 TTLL12Q14166 644 aaPredicted RBP17.68■□□□□ 0.42
CNOT3-208ENST00000613073 MIS18BP1Q6P0N0 1132 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 MAP4K3Q8IVH8 894 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 CHST13Q8NET6 341 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 UPF1Q92900 1129 aaKnown RBP eCLIP17.68■□□□□ 0.42
CNOT3-208ENST00000613073 KAT5Q92993 513 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 MAGOHBQ96A72 148 aaKnown RBP17.68■□□□□ 0.42
CNOT3-208ENST00000613073 TMEM117Q9H0C3 514 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 EXOC7Q9UPT5 735 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 SBF1O95248 1867 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 MYPNQ86TC9 1320 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 ANP32DO95626 131 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 H2AFZP0C0S5 128 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 ABCB4P21439 1286 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 ZNF844Q08AG5 666 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 CETN1Q12798 172 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 FAM133BQ5BKY9 247 aaKnown RBP17.68■□□□□ 0.42
CNOT3-208ENST00000613073 MEI1Q5TIA1 1274 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 EMC10Q5UCC4 262 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 H2AFVQ71UI9 128 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 POMGNT1Q8WZA1 660 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 FAM84AQ96KN4 292 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 CALR3Q96L12 384 aaKnown RBP17.68■□□□□ 0.42
CNOT3-208ENST00000613073 SPATS2LQ9NUQ6 558 aaKnown RBP17.68■□□□□ 0.42
CNOT3-208ENST00000613073 DICER1Q9UPY3 1922 aaKnown RBP17.68■□□□□ 0.42
CNOT3-208ENST00000613073 WDR90Q96KV7 1748 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 DGAT1O75907 488 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 SUPT20HL2P0C7V6 817 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 MXI1P50539 228 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 UAP1Q16222 522 aaPredicted RBP17.68■□□□□ 0.42
CNOT3-208ENST00000613073 SLC39A4Q6P5W5 647 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 PALB2Q86YC2 1186 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 MAGEC3Q8TD91 643 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 CCT6BQ92526 530 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 TMEM143Q96AN5 459 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 BICD1Q96G01 975 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 POLR3FQ9H1D9 316 aaPredicted RBP17.68■□□□□ 0.42
CNOT3-208ENST00000613073 TOPORSQ9NS56 1045 aaPredicted RBP17.68■□□□□ 0.42
CNOT3-208ENST00000613073 GGT7Q9UJ14 662 aa17.68■□□□□ 0.42
CNOT3-208ENST00000613073 LCTP09848 1927 aa17.67■□□□□ 0.42
CNOT3-208ENST00000613073 MYH9P35579 1960 aaKnown RBP17.67■□□□□ 0.42
CNOT3-208ENST00000613073 HNRNPDLO14979 420 aaKnown RBP17.67■□□□□ 0.42
CNOT3-208ENST00000613073 MYBL1P10243 752 aa17.67■□□□□ 0.42
CNOT3-208ENST00000613073 ATP4AP20648 1035 aa17.67■□□□□ 0.42
CNOT3-208ENST00000613073 ALDH5A1P51649 535 aaPredicted RBP17.67■□□□□ 0.42
CNOT3-208ENST00000613073 GALCP54803 685 aa17.67■□□□□ 0.42
CNOT3-208ENST00000613073 IFFO1Q0D2I5 559 aa17.67■□□□□ 0.42
CNOT3-208ENST00000613073 BZW1Q7L1Q6 419 aaKnown RBP17.67■□□□□ 0.42
CNOT3-208ENST00000613073 OLIG1Q8TAK6 271 aa17.67■□□□□ 0.42
CNOT3-208ENST00000613073 YIPF3Q9GZM5 350 aa17.67■□□□□ 0.42
CNOT3-208ENST00000613073 SPON1Q9HCB6 807 aa17.67■□□□□ 0.42
CNOT3-208ENST00000613073 DKC1O60832 514 aaKnown RBP eCLIP17.67■□□□□ 0.42
CNOT3-208ENST00000613073 STAM2O75886 525 aa17.67■□□□□ 0.42
CNOT3-208ENST00000613073 ERVK-9P63128 1117 aa17.67■□□□□ 0.42
CNOT3-208ENST00000613073 PPP2R2AP63151 447 aa17.67■□□□□ 0.42
CNOT3-208ENST00000613073 EPC2Q52LR7 807 aa17.67■□□□□ 0.42
CNOT3-208ENST00000613073 MREGQ8N565 214 aa17.67■□□□□ 0.42
CNOT3-208ENST00000613073 CCDC63Q8NA47 563 aa17.67■□□□□ 0.42
CNOT3-208ENST00000613073 WHAMMQ8TF30 809 aa17.67■□□□□ 0.42
CNOT3-208ENST00000613073 TATDN2Q93075 761 aa17.67■□□□□ 0.42
CNOT3-208ENST00000613073 SPATC1LQ9H0A9 340 aa17.67■□□□□ 0.42
CNOT3-208ENST00000613073 ZNF302Q9NR11 478 aa17.67■□□□□ 0.42
CNOT3-208ENST00000613073 TAS2R14Q9NYV8 317 aa17.67■□□□□ 0.42
CNOT3-208ENST00000613073 NENFQ9UMX5 172 aa17.67■□□□□ 0.42
CNOT3-208ENST00000613073 DLATP10515 647 aaKnown RBP17.66■□□□□ 0.42
CNOT3-208ENST00000613073 FLT3P36888 993 aa17.66■□□□□ 0.42
CNOT3-208ENST00000613073 POLGP54098 1239 aaPredicted RBP17.66■□□□□ 0.42
CNOT3-208ENST00000613073 DNERQ8NFT8 737 aa17.66■□□□□ 0.42
CNOT3-208ENST00000613073 SLC30A5Q8TAD4 765 aa17.66■□□□□ 0.42
CNOT3-208ENST00000613073 SLC20A1Q8WUM9 679 aa17.66■□□□□ 0.42
CNOT3-208ENST00000613073 NEUROG2Q9H2A3 272 aa17.66■□□□□ 0.42
CNOT3-208ENST00000613073 PDLIM7Q9NR12 457 aa17.66■□□□□ 0.42
CNOT3-208ENST00000613073 TSKSQ9UJT2 592 aa17.66■□□□□ 0.42
CNOT3-208ENST00000613073 TNFAIP3P21580 790 aa17.66■□□□□ 0.42
CNOT3-208ENST00000613073 XKR3Q5GH77 459 aa17.66■□□□□ 0.42
CNOT3-208ENST00000613073 AP1ARQ63HQ0 302 aa17.66■□□□□ 0.42
CNOT3-208ENST00000613073 PPM1KQ8N3J5 372 aa17.66■□□□□ 0.42
CNOT3-208ENST00000613073 SLC17A8Q8NDX2 589 aa17.66■□□□□ 0.42
CNOT3-208ENST00000613073 MCPH1Q8NEM0 835 aa17.66■□□□□ 0.42
CNOT3-208ENST00000613073 NTPCRQ9BSD7 190 aaKnown RBP17.66■□□□□ 0.42
CNOT3-208ENST00000613073 OSGEPQ9NPF4 335 aa17.66■□□□□ 0.42
CNOT3-208ENST00000613073 ACP6Q9NPH0 428 aa17.66■□□□□ 0.42
CNOT3-208ENST00000613073 TRPC6Q9Y210 931 aa17.66■□□□□ 0.42
CNOT3-208ENST00000613073 PTPRFP10586 1907 aa17.66■□□□□ 0.42
CNOT3-208ENST00000613073 SYNGAP1Q96PV0 1343 aa17.65■□□□□ 0.42
CNOT3-208ENST00000613073 SOWAHBA6NEL2 793 aa17.65■□□□□ 0.42
CNOT3-208ENST00000613073 KCNK3O14649 394 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms