RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 PLBD2Q8NHP8 589 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 THTPAQ9BU02 230 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 QRICH2Q9H0J4 1663 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 CIAO1O76071 339 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 CHN2P52757 468 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 LBRQ14739 615 aaKnown RBP9.23□□□□□ -0.93
TTC28-208ENST00000612946 TRIQKQ629K1 86 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 TAF2Q6P1X5 1199 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 FAM9CQ8IZT9 166 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 C6orf203Q9P0P8 240 aaPredicted RBP9.23□□□□□ -0.93
TTC28-208ENST00000612946 ATP6V1B1P15313 513 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 RXRAP19793 462 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 MXI1P50539 228 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 CENPCQ03188 943 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 NCF4Q15080 339 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 UBE3CQ15386 1083 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 DYMQ7RTS9 669 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 TNNQ9UQP3 1299 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 CDK12Q9NYV4 1490 aaPredicted RBP9.23□□□□□ -0.93
TTC28-208ENST00000612946 ATP1A1P05023 1023 aaKnown RBP9.23□□□□□ -0.93
TTC28-208ENST00000612946 CDKL3Q8IVW4 592 aaPredicted RBP9.23□□□□□ -0.93
TTC28-208ENST00000612946 NELFCDQ8IXH7 590 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 EZH1Q92800 747 aaPredicted RBP9.23□□□□□ -0.93
TTC28-208ENST00000612946 PVALEFA0A1B0GWK0 134 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 MAP2P11137 1827 aaKnown RBP9.23□□□□□ -0.93
TTC28-208ENST00000612946 ALDH18A1P54886 795 aaKnown RBP9.23□□□□□ -0.93
TTC28-208ENST00000612946 TRIP13Q15645 432 aaPredicted RBP9.23□□□□□ -0.93
TTC28-208ENST00000612946 MROH7Q68CQ1 1323 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 TBC1D7Q9P0N9 293 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 DAPK2Q9UIK4 370 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 L1RE1Q9UN81 338 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 PRELID1Q9Y255 219 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 P3H1Q32P28 736 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 ANKRD13CQ8N6S4 541 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 SMARCAD1Q9H4L7 1026 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 GINM1Q9NU53 330 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 PCDHB4Q9Y5E5 795 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 CEP170Q5SW79 1584 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 B2RBV5 119 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 GAS2O43903 313 aaKnown RBP9.23□□□□□ -0.93
TTC28-208ENST00000612946 ATP9AO75110 1047 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 PPARAQ07869 468 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 FUKQ8N0W3 1084 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 STK39Q9UEW8 545 aa9.23□□□□□ -0.93
TTC28-208ENST00000612946 A2MP01023 1474 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 SLCO1B7G3V0H7 640 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 CYP27A1Q02318 531 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 NUMA1Q14980 2115 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 ZNF398Q8TD17 642 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 BBS2Q9BXC9 721 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 IP6K2Q9UHH9 426 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 DMTF1Q9Y222 760 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 KIAA0556O60303 1618 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 USP27XA6NNY8 438 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 TBXAS1P24557 533 aaPredicted RBP9.22□□□□□ -0.93
TTC28-208ENST00000612946 BBS7Q8IWZ6 715 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.22□□□□□ -0.93
TTC28-208ENST00000612946 WDR36Q8NI36 951 aaKnown RBP9.22□□□□□ -0.93
TTC28-208ENST00000612946 MRPL48Q96GC5 212 aaKnown RBP9.22□□□□□ -0.93
TTC28-208ENST00000612946 AP3M1Q9Y2T2 418 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 TJAP1Q5JTD0 557 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 EFHC1Q5JVL4 640 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 IZUMO2Q6UXV1 221 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 RHOT1Q8IXI2 618 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 CLEC4FQ8N1N0 589 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 STAMQ92783 540 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 CNOT7Q9UIV1 285 aaKnown RBP9.22□□□□□ -0.93
TTC28-208ENST00000612946 PTPRTO14522 1441 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 MYO1DO94832 1006 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 OASLQ15646 514 aaKnown RBP9.22□□□□□ -0.93
TTC28-208ENST00000612946 TRIP4Q15650 581 aaPredicted RBP9.22□□□□□ -0.93
TTC28-208ENST00000612946 ASPRV1Q53RT3 343 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 CCDC157Q569K6 752 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 FNIP1Q8TF40 1166 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 POTEMA6NI47 508 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 TKTP29401 623 aaKnown RBP9.22□□□□□ -0.93
TTC28-208ENST00000612946 LIG4P49917 911 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 POTEHQ6S545 545 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 POTEGQ6S5H5 508 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 AKAP14Q86UN6 197 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 LPIN2Q92539 896 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 FAF2Q96CS3 445 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 METTL5Q9NRN9 209 aaKnown RBP9.22□□□□□ -0.93
TTC28-208ENST00000612946 KIAA1210Q9ULL0 1709 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 CCDC162PA2VCL2 907 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 SNPHO15079 494 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 CCDC130P13994 396 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 CNTFP26441 200 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 HSD17B3P37058 310 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 SLC1A4P43007 532 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 RPS6KA3P51812 740 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 TMPRSS6Q8IU80 811 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 LCORLQ8N3X6 602 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 ZIM3Q96PE6 472 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 CYP39A1Q9NYL5 469 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 A0A0D9SFI3 127 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 THRAP10827 490 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 MFSD4BQ5TF39 518 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 GPS1Q13098 491 aa9.22□□□□□ -0.93
TTC28-208ENST00000612946 CCDC149Q6ZUS6 474 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms