RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 EMBQ6PCB8 327 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 CATSPERGQ6ZRH7 1159 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 H2AFVQ71UI9 128 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 DNAAF5Q86Y56 855 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 FUKQ8N0W3 1084 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 CCDC197Q8NCU1 140 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 SH3TC2Q8TF17 1288 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 TNFRSF25Q93038 417 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 SENP7Q9BQF6 1050 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 MROH8Q9H579 483 aa11.57□□□□□ -0.56
FAM3A-221ENST00000612856 ANP32DO95626 131 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 EIF4A3P38919 411 aaKnown RBP11.56□□□□□ -0.56
FAM3A-221ENST00000612856 AARSP49588 968 aaKnown RBP eCLIP11.56□□□□□ -0.56
FAM3A-221ENST00000612856 ZNF699Q32M78 642 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 TTMPQ5BVD1 217 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 KCNK18Q7Z418 384 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 TTC30AQ86WT1 665 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 KIF2BQ8N4N8 673 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 KLHL29Q96CT2 875 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 SLC38A10Q9HBR0 1119 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 TOPORSQ9NS56 1045 aaPredicted RBP11.56□□□□□ -0.56
FAM3A-221ENST00000612856 FAM49BQ9NUQ9 324 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 DNAJC12Q9UKB3 198 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 HES2Q9Y543 173 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 TIMM13Q9Y5L4 95 aaPredicted RBP11.56□□□□□ -0.56
FAM3A-221ENST00000612856 ANKRD36CQ5JPF3 1778 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 PPP1R3GB7ZBB8 358 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 AGPSO00116 658 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 GNA14O95837 355 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 MOCS2O96007 188 aaPredicted RBP11.56□□□□□ -0.56
FAM3A-221ENST00000612856 RUFY4Q6ZNE9 571 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 TLK2Q86UE8 772 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 CALN1Q9BXU9 219 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 AGPAT5Q9NUQ2 364 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 BTAF1O14981 1849 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 TRIOBPQ9H2D6 2365 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 PRKAR2AP13861 404 aaKnown RBP11.56□□□□□ -0.56
FAM3A-221ENST00000612856 CPB1P15086 417 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 MAPK4P31152 587 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 SLCO1A2P46721 670 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 KLK7P49862 253 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 MAGOHP61326 146 aaKnown RBP11.56□□□□□ -0.56
FAM3A-221ENST00000612856 VWA3BQ502W6 1294 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 TCP11X2Q5H9J9 407 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 PPP6R3Q5H9R7 873 aaPredicted RBP11.56□□□□□ -0.56
FAM3A-221ENST00000612856 TRAPPC11Q7Z392 1133 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 EXOC8Q8IYI6 725 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 MDM1Q8TC05 714 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 MAGOHBQ96A72 148 aaKnown RBP11.56□□□□□ -0.56
FAM3A-221ENST00000612856 MED15Q96RN5 788 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 IKZF4Q9H2S9 585 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 ASIC3Q9UHC3 531 aa11.56□□□□□ -0.56
FAM3A-221ENST00000612856 TPRP12270 2363 aaKnown RBP11.56□□□□□ -0.56
FAM3A-221ENST00000612856 LRRD1A4D1F6 860 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 GRAP2O75791 330 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 RGS7P49802 495 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 ALDH5A1P51649 535 aaPredicted RBP11.55□□□□□ -0.56
FAM3A-221ENST00000612856 SEC16BQ96JE7 1060 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 C11orf70Q9BRQ4 267 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 MRPL4Q9BYD3 311 aaKnown RBP11.55□□□□□ -0.56
FAM3A-221ENST00000612856 NOP53Q9NZM5 478 aaKnown RBP11.55□□□□□ -0.56
FAM3A-221ENST00000612856 EME2A4GXA9 379 aaPredicted RBP11.55□□□□□ -0.56
FAM3A-221ENST00000612856 RNF225M0QZC1 329 aaPredicted RBP11.55□□□□□ -0.56
FAM3A-221ENST00000612856 FZD9O00144 591 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 FSBPO95073 299 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 TCP1P17987 556 aaKnown RBP11.55□□□□□ -0.56
FAM3A-221ENST00000612856 RPA1P27694 616 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 ACVR2BQ13705 512 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 C15orf52Q6ZUT6 534 aaKnown RBP11.55□□□□□ -0.56
FAM3A-221ENST00000612856 GLIS3Q8NEA6 775 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 GMCL1P1Q8NEA9 526 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 ATP6V1G3Q96LB4 118 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 CBWD1Q9BRT8 395 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 NUP58Q9BVL2 599 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 MLXIPLQ9NP71 852 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 BTBD7Q9P203 1132 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 FAM107AO95990 144 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 AKAP5P24588 427 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 KCNA1Q09470 495 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 PLCB4Q15147 1175 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 HSDL1Q3SXM5 330 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 KIAA1755Q5JYT7 1200 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 FKBP1CQ5VVH2 108 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 RINT1Q6NUQ1 792 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 GJB7Q6PEY0 223 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 GPR142Q7Z601 462 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 LMNTD2Q8IXW0 634 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 ANKRD42Q8N9B4 389 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 TRIM4Q9C037 500 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 PLCB1Q9NQ66 1216 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 RBM12Q9NTZ6 932 aaKnown RBP11.55□□□□□ -0.56
FAM3A-221ENST00000612856 CYP39A1Q9NYL5 469 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 PCSK1NQ9UHG2 260 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 USH1CQ9Y6N9 552 aa11.55□□□□□ -0.56
FAM3A-221ENST00000612856 A8MXQ7 604 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 XPOTO43592 962 aaKnown RBP11.54□□□□□ -0.56
FAM3A-221ENST00000612856 B3GAT3O94766 335 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 NPTXRO95502 500 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 FAM153BP0C7A2 387 aa11.54□□□□□ -0.56
FAM3A-221ENST00000612856 RAG1P15918 1043 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms