RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 IPO7O95373 1038 aaKnown RBP9.66□□□□□ -0.86
CCDC47-207ENST00000612558 SERPING1P05155 500 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 EDN1P05305 212 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 GJB1P08034 283 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 SMIM10L2AP0DMW4 78 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 SMIM10L2BP0DMW5 78 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 CYBAP13498 195 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 RFX1P22670 979 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 MAP2K2P36507 400 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 CLDN10P78369 228 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 CDC42EP1Q00587 391 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 RAPGEF1Q13905 1077 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 PSMD6Q15008 389 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 FAM187BQ17R55 369 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 EPC2Q52LR7 807 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 NFRKBQ6P4R8 1299 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 TSHZ1Q6ZSZ6 1077 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 FMNL3Q8IVF7 1028 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 ACRBPQ8NEB7 543 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 TRPV1Q8NER1 839 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 LMO3Q8TAP4 145 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 TRIB2Q92519 343 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 LENG1Q96BZ8 264 aaPredicted RBP9.66□□□□□ -0.86
CCDC47-207ENST00000612558 THAP11Q96EK4 314 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 ZBTB45Q96K62 511 aaPredicted RBP9.66□□□□□ -0.86
CCDC47-207ENST00000612558 MAP7D2Q96T17 732 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 TCHPQ9BT92 498 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 KATNAL1Q9BW62 490 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 STK33Q9BYT3 514 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 INO80BQ9C086 356 aaPredicted RBP9.66□□□□□ -0.86
CCDC47-207ENST00000612558 HAPLN2Q9GZV7 340 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 IFT122Q9HBG6 1241 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 SETD4Q9NVD3 440 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 PRMT7Q9NVM4 692 aaPredicted RBP9.66□□□□□ -0.86
CCDC47-207ENST00000612558 ARHGAP20Q9P2F6 1191 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 APEX2Q9UBZ4 518 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 FHOD1Q9Y613 1164 aa9.66□□□□□ -0.86
CCDC47-207ENST00000612558 BZW2Q9Y6E2 419 aaKnown RBP9.66□□□□□ -0.86
CCDC47-207ENST00000612558 A0A087WZ62 844 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 HAS3O00219 553 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 ZEB2O60315 1214 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 MYL3P08590 195 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 HOXD10P28358 340 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 EIF4A3P38919 411 aaKnown RBP9.65□□□□□ -0.86
CCDC47-207ENST00000612558 ACOT2P49753 483 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 JAM2P57087 298 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 GJA9P57773 515 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 NLRP11P59045 1033 aaKnown RBP9.65□□□□□ -0.86
CCDC47-207ENST00000612558 ETF1P62495 437 aaKnown RBP9.65□□□□□ -0.86
CCDC47-207ENST00000612558 PRKCZQ05513 592 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 MBTD1Q05BQ5 628 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 MCL1Q07820 350 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 PRPF4BQ13523 1007 aaKnown RBP9.65□□□□□ -0.86
CCDC47-207ENST00000612558 ASIC2Q16515 512 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 FSCN1Q16658 493 aaKnown RBP9.65□□□□□ -0.86
CCDC47-207ENST00000612558 HGSNATQ68CP4 663 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 IQCEQ6IPM2 695 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 CRELD2Q6UXH1 353 aaPredicted RBP9.65□□□□□ -0.86
CCDC47-207ENST00000612558 ZNF410Q86VK4 478 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 KIAA0319LQ8IZA0 1049 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 KIF18AQ8NI77 898 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 LMBR1Q8WVP7 490 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 VTI1AQ96AJ9 217 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 PRIMPOLQ96LW4 560 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 FNBP1Q96RU3 617 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 FDXACB1Q9BRP7 624 aaPredicted RBP9.65□□□□□ -0.86
CCDC47-207ENST00000612558 DEF6Q9H4E7 631 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 DNAJC12Q9UKB3 198 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 TNFSF13BQ9Y275 285 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 COQ4Q9Y3A0 265 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 PAXBP1Q9Y5B6 917 aa9.65□□□□□ -0.86
CCDC47-207ENST00000612558 CASP8AP2Q9UKL3 1982 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 SMIM35A0A1B0GVV1 85 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 MBLAC1A4D2B0 266 aaPredicted RBP9.64□□□□□ -0.87
CCDC47-207ENST00000612558 ABLIM1O14639 778 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 AKR1B10O60218 316 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 TRPA1O75762 1119 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 LCA5LO95447 670 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 VTNP04004 478 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 PLEKP08567 350 aaPredicted RBP9.64□□□□□ -0.87
CCDC47-207ENST00000612558 DLATP10515 647 aaKnown RBP9.64□□□□□ -0.87
CCDC47-207ENST00000612558 PROZP22891 400 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 STAT1P42224 750 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 GCGRP47871 477 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 GPC3P51654 580 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 KIF11P52732 1056 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 CHMP4BP1P59074 171 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 BEX3Q00994 111 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 MAP2K1Q02750 393 aaPredicted RBP9.64□□□□□ -0.87
CCDC47-207ENST00000612558 KLHL30Q0D2K2 578 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 SPA17Q15506 151 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 ASTE1Q2TB18 679 aaPredicted RBP9.64□□□□□ -0.87
CCDC47-207ENST00000612558 ARHGAP29Q52LW3 1261 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 TDRD12Q587J7 1177 aaKnown RBP9.64□□□□□ -0.87
CCDC47-207ENST00000612558 LCE2AQ5TA79 106 aaPredicted RBP9.64□□□□□ -0.87
CCDC47-207ENST00000612558 ATF7IP2Q5U623 682 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 PHLDB3Q6NSJ2 640 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 GJB7Q6PEY0 223 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 MPZL3Q6UWV2 235 aa9.64□□□□□ -0.87
CCDC47-207ENST00000612558 ZNF662Q6ZS27 426 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms