RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 EPHB4P54760 987 aa13.93□□□□□ -0.18
PRKN-210ENST00000612540 SMAD3P84022 425 aaKnown RBP13.93□□□□□ -0.18
PRKN-210ENST00000612540 BFSP1Q12934 665 aa13.93□□□□□ -0.18
PRKN-210ENST00000612540 DSC3Q14574 896 aa13.93□□□□□ -0.18
PRKN-210ENST00000612540 GPNMBQ14956 572 aa13.93□□□□□ -0.18
PRKN-210ENST00000612540 MAN2A1Q16706 1144 aa13.93□□□□□ -0.18
PRKN-210ENST00000612540 FILIP1LQ4L180 1135 aa13.93□□□□□ -0.18
PRKN-210ENST00000612540 CRELD2Q6UXH1 353 aaPredicted RBP13.93□□□□□ -0.18
PRKN-210ENST00000612540 USP37Q86T82 979 aa13.93□□□□□ -0.18
PRKN-210ENST00000612540 TRIM59Q8IWR1 403 aa13.93□□□□□ -0.18
PRKN-210ENST00000612540 TMEM174Q8WUU8 243 aa13.93□□□□□ -0.18
PRKN-210ENST00000612540 APBB2Q92870 758 aa13.93□□□□□ -0.18
PRKN-210ENST00000612540 FBXL18Q96ME1 805 aa13.93□□□□□ -0.18
PRKN-210ENST00000612540 ACAP3Q96P50 834 aa13.93□□□□□ -0.18
PRKN-210ENST00000612540 FNBP1Q96RU3 617 aa13.93□□□□□ -0.18
PRKN-210ENST00000612540 TRIM5Q9C035 493 aa13.93□□□□□ -0.18
PRKN-210ENST00000612540 IFNKQ9P0W0 207 aa13.93□□□□□ -0.18
PRKN-210ENST00000612540 LIMA1Q9UHB6 759 aaKnown RBP13.93□□□□□ -0.18
PRKN-210ENST00000612540 CPSF3Q9UKF6 684 aaKnown RBP13.93□□□□□ -0.18
PRKN-210ENST00000612540 IPPQ9Y573 584 aa13.93□□□□□ -0.18
PRKN-210ENST00000612540 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.93□□□□□ -0.18
PRKN-210ENST00000612540 MYO9BQ13459 2157 aa13.93□□□□□ -0.18
PRKN-210ENST00000612540 CUL9Q8IWT3 2517 aa13.93□□□□□ -0.18
PRKN-210ENST00000612540 RECQL4O94761 1208 aa13.92□□□□□ -0.18
PRKN-210ENST00000612540 CXCL10P02778 98 aa13.92□□□□□ -0.18
PRKN-210ENST00000612540 ITGA4P13612 1032 aa13.92□□□□□ -0.18
PRKN-210ENST00000612540 CSF2RAP15509 400 aa13.92□□□□□ -0.18
PRKN-210ENST00000612540 AKAP5P24588 427 aa13.92□□□□□ -0.18
PRKN-210ENST00000612540 MRE11P49959 708 aa13.92□□□□□ -0.18
PRKN-210ENST00000612540 MARSP56192 900 aaKnown RBP13.92□□□□□ -0.18
PRKN-210ENST00000612540 PPP2R3AQ06190 1150 aa13.92□□□□□ -0.18
PRKN-210ENST00000612540 PSMD6Q15008 389 aa13.92□□□□□ -0.18
PRKN-210ENST00000612540 ENOX2Q16206 610 aaKnown RBP13.92□□□□□ -0.18
PRKN-210ENST00000612540 LMBRD2Q68DH5 695 aaPredicted RBP13.92□□□□□ -0.18
PRKN-210ENST00000612540 MFSD5Q6N075 450 aa13.92□□□□□ -0.18
PRKN-210ENST00000612540 PDE11AQ9HCR9 933 aa13.92□□□□□ -0.18
PRKN-210ENST00000612540 C1orf112Q9NSG2 853 aa13.92□□□□□ -0.18
PRKN-210ENST00000612540 PDCD11Q14690 1871 aaKnown RBP13.92□□□□□ -0.18
PRKN-210ENST00000612540 CBFA2T2O43439 604 aa13.91□□□□□ -0.18
PRKN-210ENST00000612540 IL18RAPO95256 599 aa13.91□□□□□ -0.18
PRKN-210ENST00000612540 TPM3P06753 285 aa13.91□□□□□ -0.18
PRKN-210ENST00000612540 SKIP12755 728 aa13.91□□□□□ -0.18
PRKN-210ENST00000612540 TNNI1P19237 187 aa13.91□□□□□ -0.18
PRKN-210ENST00000612540 UBASH3AP57075 661 aa13.91□□□□□ -0.18
PRKN-210ENST00000612540 SURF1Q15526 300 aa13.91□□□□□ -0.18
PRKN-210ENST00000612540 TCTN1Q2MV58 587 aa13.91□□□□□ -0.18
PRKN-210ENST00000612540 CNKSR3Q6P9H4 555 aa13.91□□□□□ -0.18
PRKN-210ENST00000612540 RPUSD2Q8IZ73 545 aaKnown RBP13.91□□□□□ -0.18
PRKN-210ENST00000612540 SMG8Q8ND04 991 aaKnown RBP13.91□□□□□ -0.18
PRKN-210ENST00000612540 PLEKHO2Q8TD55 490 aa13.91□□□□□ -0.18
PRKN-210ENST00000612540 TMC2Q8TDI7 906 aa13.91□□□□□ -0.18
PRKN-210ENST00000612540 LINC01599Q8WXQ3 324 aa13.91□□□□□ -0.18
PRKN-210ENST00000612540 LPPQ93052 612 aa13.91□□□□□ -0.18
PRKN-210ENST00000612540 BORCS6Q96GS4 357 aa13.91□□□□□ -0.18
PRKN-210ENST00000612540 MFSD14AQ96MC6 490 aa13.91□□□□□ -0.18
PRKN-210ENST00000612540 CGRRF1Q99675 332 aa13.91□□□□□ -0.18
PRKN-210ENST00000612540 TSPYL2Q9H2G4 693 aaPredicted RBP13.91□□□□□ -0.18
PRKN-210ENST00000612540 TOPORSQ9NS56 1045 aaPredicted RBP13.91□□□□□ -0.18
PRKN-210ENST00000612540 KLK14Q9P0G3 267 aa13.91□□□□□ -0.18
PRKN-210ENST00000612540 TDRD15B5MCY1 1934 aaKnown RBP13.9□□□□□ -0.18
PRKN-210ENST00000612540 TTC3P53804 2025 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 LRRIQ3A6PVS8 624 aaPredicted RBP13.9□□□□□ -0.18
PRKN-210ENST00000612540 LGALS16A8MUM7 142 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 LACTBL1A8MY62 500 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 STX10O60499 249 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 CLSTN1O94985 981 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 AFPP02771 609 aaKnown RBP13.9□□□□□ -0.18
PRKN-210ENST00000612540 ACRP10323 421 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 DLG4P78352 724 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 FPGSQ05932 587 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 KCNH2Q12809 1159 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 PPIGQ13427 754 aaKnown RBP eCLIP13.9□□□□□ -0.18
PRKN-210ENST00000612540 IKBKEQ14164 716 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 VWA3BQ502W6 1294 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 FKBP15Q5T1M5 1219 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 SARM1Q6SZW1 724 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 SLC24A5Q71RS6 500 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 ECHDC2Q86YB7 292 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 PARD3BQ8TEW8 1205 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 ANP32BQ92688 251 aaKnown RBP13.9□□□□□ -0.18
PRKN-210ENST00000612540 SLC35C1Q96A29 364 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 PGBD4Q96DM1 585 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 FAM84AQ96KN4 292 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 SNX27Q96L92 541 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 RPS6KC1Q96S38 1066 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 POP1Q99575 1024 aaKnown RBP13.9□□□□□ -0.18
PRKN-210ENST00000612540 CDX2Q99626 313 aaPredicted RBP13.9□□□□□ -0.18
PRKN-210ENST00000612540 XPO4Q9C0E2 1151 aaKnown RBP13.9□□□□□ -0.18
PRKN-210ENST00000612540 RNF39Q9H2S5 420 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 TTYH1Q9H313 450 aaPredicted RBP13.9□□□□□ -0.18
PRKN-210ENST00000612540 RGS18Q9NS28 235 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 LRFN2Q9ULH4 789 aa13.9□□□□□ -0.18
PRKN-210ENST00000612540 PRUNE2Q8WUY3 3088 aa13.89□□□□□ -0.19
PRKN-210ENST00000612540 A0A0U1RQF3 1178 aa13.89□□□□□ -0.19
PRKN-210ENST00000612540 C9IYK1 514 aa13.89□□□□□ -0.19
PRKN-210ENST00000612540 AP5Z1O43299 807 aa13.89□□□□□ -0.19
PRKN-210ENST00000612540 PFKMP08237 780 aa13.89□□□□□ -0.19
PRKN-210ENST00000612540 TMEM191BP0C7N4 346 aa13.89□□□□□ -0.19
PRKN-210ENST00000612540 ACTN1P12814 892 aa13.89□□□□□ -0.19
PRKN-210ENST00000612540 GCLMP48507 274 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms