RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.74□□□□□ -0.05
HMGB1P24-201ENST00000611897 FBXW11Q9UKB1 542 aa14.74□□□□□ -0.05
HMGB1P24-201ENST00000611897 R4GN57 208 aa14.74□□□□□ -0.05
HMGB1P24-201ENST00000611897 ZMYM2Q9UBW7 1377 aa14.73□□□□□ -0.05
HMGB1P24-201ENST00000611897 CACNA1IQ9P0X4 2223 aa14.73□□□□□ -0.05
HMGB1P24-201ENST00000611897 ADAM12O43184 909 aa14.73□□□□□ -0.05
HMGB1P24-201ENST00000611897 LILRA6Q6PI73 481 aa14.73□□□□□ -0.05
HMGB1P24-201ENST00000611897 DCLRE1AQ6PJP8 1040 aa14.73□□□□□ -0.05
HMGB1P24-201ENST00000611897 SLC7A14Q8TBB6 771 aa14.73□□□□□ -0.05
HMGB1P24-201ENST00000611897 ING5Q8WYH8 240 aa14.73□□□□□ -0.05
HMGB1P24-201ENST00000611897 PIK3R5Q8WYR1 880 aa14.73□□□□□ -0.05
HMGB1P24-201ENST00000611897 RPP25Q9BUL9 199 aaKnown RBP14.73□□□□□ -0.05
HMGB1P24-201ENST00000611897 RHOBTB2Q9BYZ6 727 aa14.73□□□□□ -0.05
HMGB1P24-201ENST00000611897 COL4A3Q01955 1670 aa14.72□□□□□ -0.05
HMGB1P24-201ENST00000611897 EDN1P05305 212 aa14.72□□□□□ -0.05
HMGB1P24-201ENST00000611897 XRCC6P12956 609 aaKnown RBP eCLIP14.72□□□□□ -0.05
HMGB1P24-201ENST00000611897 CCT6AP40227 531 aaKnown RBP14.72□□□□□ -0.05
HMGB1P24-201ENST00000611897 NAMPTP43490 491 aa14.72□□□□□ -0.05
HMGB1P24-201ENST00000611897 ST3GAL1Q11201 340 aa14.72□□□□□ -0.05
HMGB1P24-201ENST00000611897 PARM1Q6UWI2 310 aa14.72□□□□□ -0.05
HMGB1P24-201ENST00000611897 CCDC83Q8IWF9 413 aa14.72□□□□□ -0.05
HMGB1P24-201ENST00000611897 FGF14Q92915 247 aa14.72□□□□□ -0.05
HMGB1P24-201ENST00000611897 NXPE3Q969Y0 559 aa14.72□□□□□ -0.05
HMGB1P24-201ENST00000611897 C8orf76Q96K31 380 aa14.72□□□□□ -0.05
HMGB1P24-201ENST00000611897 IFT74Q96LB3 600 aa14.72□□□□□ -0.05
HMGB1P24-201ENST00000611897 CLSTN3Q9BQT9 956 aa14.72□□□□□ -0.05
HMGB1P24-201ENST00000611897 FZD8Q9H461 694 aa14.72□□□□□ -0.05
HMGB1P24-201ENST00000611897 GOLGA2P5Q9HBQ8 144 aa14.72□□□□□ -0.05
HMGB1P24-201ENST00000611897 I3L4J1 428 aa14.71□□□□□ -0.05
HMGB1P24-201ENST00000611897 ACKR2O00590 384 aa14.71□□□□□ -0.05
HMGB1P24-201ENST00000611897 XYLBO75191 536 aa14.71□□□□□ -0.05
HMGB1P24-201ENST00000611897 LRRN2O75325 713 aa14.71□□□□□ -0.05
HMGB1P24-201ENST00000611897 B3GAT3O94766 335 aa14.71□□□□□ -0.05
HMGB1P24-201ENST00000611897 CYP11B2P19099 503 aa14.71□□□□□ -0.05
HMGB1P24-201ENST00000611897 OR1D2P34982 312 aa14.71□□□□□ -0.05
HMGB1P24-201ENST00000611897 OSTNP61366 133 aa14.71□□□□□ -0.05
HMGB1P24-201ENST00000611897 ELAVL2Q12926 359 aaKnown RBP14.71□□□□□ -0.05
HMGB1P24-201ENST00000611897 PPP2R5AQ15172 486 aa14.71□□□□□ -0.05
HMGB1P24-201ENST00000611897 FAM187BQ17R55 369 aa14.71□□□□□ -0.05
HMGB1P24-201ENST00000611897 DCAF4L1Q3SXM0 396 aa14.71□□□□□ -0.05
HMGB1P24-201ENST00000611897 GPR65Q8IYL9 337 aa14.71□□□□□ -0.05
HMGB1P24-201ENST00000611897 ITFG1Q8TB96 612 aa14.71□□□□□ -0.05
HMGB1P24-201ENST00000611897 LNX1Q8TBB1 728 aaPredicted RBP14.71□□□□□ -0.05
HMGB1P24-201ENST00000611897 KXD1Q9BQD3 176 aa14.71□□□□□ -0.05
HMGB1P24-201ENST00000611897 POLR3CQ9BUI4 534 aaPredicted RBP14.71□□□□□ -0.05
HMGB1P24-201ENST00000611897 HCFC1R1Q9NWW0 138 aa14.71□□□□□ -0.05
HMGB1P24-201ENST00000611897 CDH7Q9ULB5 785 aa14.71□□□□□ -0.05
HMGB1P24-201ENST00000611897 SIT1Q9Y3P8 196 aa14.71□□□□□ -0.05
HMGB1P24-201ENST00000611897 DMDP11532 3685 aa14.7□□□□□ -0.06
HMGB1P24-201ENST00000611897 ANHXE9PGG2 379 aa14.7□□□□□ -0.06
HMGB1P24-201ENST00000611897 HNRNPA1P09651 372 aaKnown RBP eCLIP14.7□□□□□ -0.06
HMGB1P24-201ENST00000611897 HARSP12081 509 aaKnown RBP14.7□□□□□ -0.06
HMGB1P24-201ENST00000611897 IGFBP6P24592 240 aaPredicted RBP14.7□□□□□ -0.06
HMGB1P24-201ENST00000611897 RPA1P27694 616 aa14.7□□□□□ -0.06
HMGB1P24-201ENST00000611897 TKTP29401 623 aaKnown RBP14.7□□□□□ -0.06
HMGB1P24-201ENST00000611897 GPC5P78333 572 aa14.7□□□□□ -0.06
HMGB1P24-201ENST00000611897 SNW1Q13573 536 aaKnown RBP14.7□□□□□ -0.06
HMGB1P24-201ENST00000611897 NBR1Q14596 966 aa14.7□□□□□ -0.06
HMGB1P24-201ENST00000611897 UBXN2BQ14CS0 331 aa14.7□□□□□ -0.06
HMGB1P24-201ENST00000611897 TTC38Q5R3I4 469 aa14.7□□□□□ -0.06
HMGB1P24-201ENST00000611897 AXDND1Q5T1B0 1012 aaPredicted RBP14.7□□□□□ -0.06
HMGB1P24-201ENST00000611897 ATF7IP2Q5U623 682 aa14.7□□□□□ -0.06
HMGB1P24-201ENST00000611897 HAUS3Q68CZ6 603 aa14.7□□□□□ -0.06
HMGB1P24-201ENST00000611897 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.7□□□□□ -0.06
HMGB1P24-201ENST00000611897 FGF13Q92913 245 aa14.7□□□□□ -0.06
HMGB1P24-201ENST00000611897 CCDC113Q9H0I3 377 aa14.7□□□□□ -0.06
HMGB1P24-201ENST00000611897 BHMT2Q9H2M3 363 aa14.7□□□□□ -0.06
HMGB1P24-201ENST00000611897 CDY1Q9Y6F8 540 aa14.7□□□□□ -0.06
HMGB1P24-201ENST00000611897 CCDC169A6NNP5 214 aa14.69□□□□□ -0.06
HMGB1P24-201ENST00000611897 BRCC3P46736 316 aa14.69□□□□□ -0.06
HMGB1P24-201ENST00000611897 ID4P47928 161 aa14.69□□□□□ -0.06
HMGB1P24-201ENST00000611897 CLCNKBP51801 687 aa14.69□□□□□ -0.06
HMGB1P24-201ENST00000611897 ARPP19P56211 112 aa14.69□□□□□ -0.06
HMGB1P24-201ENST00000611897 NAB2Q15742 525 aa14.69□□□□□ -0.06
HMGB1P24-201ENST00000611897 ZNF568Q3ZCX4 644 aa14.69□□□□□ -0.06
HMGB1P24-201ENST00000611897 PABPC1LQ4VXU2 614 aaKnown RBP14.69□□□□□ -0.06
HMGB1P24-201ENST00000611897 PDXDC1Q6P996 788 aa14.69□□□□□ -0.06
HMGB1P24-201ENST00000611897 MTSS1LQ765P7 747 aa14.69□□□□□ -0.06
HMGB1P24-201ENST00000611897 CEP120Q8N960 986 aa14.69□□□□□ -0.06
HMGB1P24-201ENST00000611897 PJA1Q8NG27 643 aa14.69□□□□□ -0.06
HMGB1P24-201ENST00000611897 CITO14578 2027 aa14.69□□□□□ -0.06
HMGB1P24-201ENST00000611897 ZNF292O60281 2723 aa14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 DMXL1Q9Y485 3027 aa14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 C1RP00736 705 aa14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 LMNAP02545 664 aaKnown RBP14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 EFNA5P52803 228 aa14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 YARSP54577 528 aaKnown RBP14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 NT5DC1Q5TFE4 455 aa14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 PHLDB3Q6NSJ2 640 aa14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 APBB1IPQ7Z5R6 666 aaPredicted RBP14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 KIAA2013Q8IYS2 634 aa14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 FAM184AQ8NB25 1140 aa14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 SNX29Q8TEQ0 813 aa14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 KIFAP3Q92845 792 aa14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 SHDQ96IW2 340 aa14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 CCDC94Q9BW85 323 aaPredicted RBP14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 SLC2A4RGQ9NR83 387 aa14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 DDX19AQ9NUU7 478 aaKnown RBP14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 MTRRQ9UBK8 725 aa14.68□□□□□ -0.06
HMGB1P24-201ENST00000611897 NOL7Q9UMY1 257 aaKnown RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms