RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 KCPQ6ZWJ8 1503 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 F5H423 210 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-218ENST00000610726 H3BRB1 525 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 PODXLO00592 558 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 RASGRF2O14827 1237 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 PPP1R11O60927 126 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-218ENST00000610726 CRCPO75575 148 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 CPP00450 1065 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 ALDH5A1P51649 535 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-218ENST00000610726 PPATQ06203 517 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 NME3Q13232 169 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 TFDP2Q14188 446 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 SLMAPQ14BN4 828 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 TMED2Q15363 201 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 ZKSCAN8Q15776 578 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-218ENST00000610726 ARL13BQ3SXY8 428 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 ANKRD20A3Q5VUR7 823 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 CCDC137Q6PK04 289 aaKnown RBP7.74□□□□□ -1.17
CSDE1-218ENST00000610726 C4orf50Q6ZRC1 276 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 MICAL1Q8TDZ2 1067 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 CLMNQ96JQ2 1002 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 WDR18Q9BV38 432 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 KATNAL1Q9BW62 490 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 DHX35Q9H5Z1 703 aaKnown RBP7.74□□□□□ -1.17
CSDE1-218ENST00000610726 TUT1Q9H6E5 874 aaKnown RBP7.74□□□□□ -1.17
CSDE1-218ENST00000610726 ZCCHC17Q9NP64 241 aaKnown RBP7.74□□□□□ -1.17
CSDE1-218ENST00000610726 PARVAQ9NVD7 372 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 NAGPAQ9UK23 515 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 COL14A1Q05707 1796 aaKnown RBP7.74□□□□□ -1.17
CSDE1-218ENST00000610726 EXOC1LA0A1B0GW35 172 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 GIPC1O14908 333 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 OGTO15294 1046 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 SART1O43290 800 aaKnown RBP7.74□□□□□ -1.17
CSDE1-218ENST00000610726 NPM3O75607 178 aaKnown RBP7.74□□□□□ -1.17
CSDE1-218ENST00000610726 NPTXRO95502 500 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 ITGB3P05106 788 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 ZNF286BP0CG31 522 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 CDH6P55285 790 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 ORC1Q13415 861 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 CUL1Q13616 776 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 GLE1Q53GS7 698 aaKnown RBP7.74□□□□□ -1.17
CSDE1-218ENST00000610726 VSIG10LQ86VR7 867 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 PYROXD1Q8WU10 500 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 CDKL2Q92772 493 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 HVCN1Q96D96 273 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 RILPQ96NA2 401 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 MTMR12Q9C0I1 747 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 TMEM117Q9H0C3 514 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 KCNMB3Q9NPA1 279 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 HAUS2Q9NVX0 235 aa7.74□□□□□ -1.17
CSDE1-218ENST00000610726 CPSF3Q9UKF6 684 aaKnown RBP7.74□□□□□ -1.17
CSDE1-218ENST00000610726 DIS3Q9Y2L1 958 aaKnown RBP7.74□□□□□ -1.17
CSDE1-218ENST00000610726 ATP8B3O60423 1300 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 A0A087WZ62 844 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 SPDYE16A6NNV3 312 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-218ENST00000610726 TISP43B9A030 160 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 TBC1D12O60347 775 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 TOM1L1O75674 476 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 INSRRP14616 1297 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 ITGB5P18084 799 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 ADORA2AP29274 412 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 GTF2H1P32780 548 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 NAMPTP43490 491 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 PSMC4P43686 418 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 CATSPERGQ6ZRH7 1159 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 FDXACB1Q9BRP7 624 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-218ENST00000610726 SIK2Q9H0K1 926 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 WNT8AQ9H1J5 351 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 EHD2Q9NZN4 543 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 ZBBXA8MT70 800 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 ATP9AO75110 1047 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 MOCS2O96007 188 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-218ENST00000610726 CYP3A4P08684 503 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 TGFB3P10600 412 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 CASP5P51878 434 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 GPAT2Q6NUI2 795 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 NYAP1Q6ZVC0 841 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 SV2AQ7L0J3 742 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 ZC3H18Q86VM9 953 aaKnown RBP7.73□□□□□ -1.17
CSDE1-218ENST00000610726 TNIP3Q96KP6 325 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 DNAJC7Q99615 494 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 NIF3L1Q9GZT8 377 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 SLITRK6Q9H5Y7 841 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 SAYSD1Q9NPB0 183 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 ARHGAP20Q9P2F6 1191 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 KCNH4Q9UQ05 1017 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 PLAAQ9Y263 795 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 ALG6Q9Y672 507 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 FAM237AA0A1B0GTK4 181 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 P4HA2O15460 535 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 BNIP3LO60238 219 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 ONECUT3O60422 494 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-218ENST00000610726 KRT7P08729 469 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 PDGFRAP16234 1089 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 BRD2P25440 801 aaKnown RBP7.73□□□□□ -1.17
CSDE1-218ENST00000610726 MSH2P43246 934 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 OAZ1P54368 228 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 BCAR1P56945 870 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 CDC42EP1Q00587 391 aa7.73□□□□□ -1.17
CSDE1-218ENST00000610726 CACNB2Q08289 660 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms