RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 USP17L17D6RBQ6 530 aa9.66□□□□□ -0.86
COL25A1-208ENST00000610288 USP17L19D6RCP7 530 aa9.66□□□□□ -0.86
COL25A1-208ENST00000610288 USP17L20D6RJB6 530 aa9.66□□□□□ -0.86
COL25A1-208ENST00000610288 SLC16A3O15427 465 aaKnown RBP9.66□□□□□ -0.86
COL25A1-208ENST00000610288 ASAP2O43150 1006 aa9.66□□□□□ -0.86
COL25A1-208ENST00000610288 RTN2O75298 545 aa9.66□□□□□ -0.86
COL25A1-208ENST00000610288 OSTNP61366 133 aa9.66□□□□□ -0.86
COL25A1-208ENST00000610288 USP17L24Q0WX57 530 aa9.66□□□□□ -0.86
COL25A1-208ENST00000610288 CEP55Q53EZ4 464 aa9.66□□□□□ -0.86
COL25A1-208ENST00000610288 USP17L6PQ6QN14 398 aa9.66□□□□□ -0.86
COL25A1-208ENST00000610288 ACAD11Q709F0 780 aa9.66□□□□□ -0.86
COL25A1-208ENST00000610288 CYFIP1Q7L576 1253 aa9.66□□□□□ -0.86
COL25A1-208ENST00000610288 EXOC8Q8IYI6 725 aa9.66□□□□□ -0.86
COL25A1-208ENST00000610288 FUKQ8N0W3 1084 aa9.66□□□□□ -0.86
COL25A1-208ENST00000610288 SRBD1Q8N5C6 995 aaKnown RBP9.66□□□□□ -0.86
COL25A1-208ENST00000610288 BTBD6Q96KE9 485 aa9.66□□□□□ -0.86
COL25A1-208ENST00000610288 BTBD7Q9P203 1132 aa9.66□□□□□ -0.86
COL25A1-208ENST00000610288 POTEB3A0JP26 581 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 POTECB2RU33 542 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 K7ERI5 159 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 ASNSP08243 561 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 SLC1A1P43005 524 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 HDAC4P56524 1084 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 PEX3P56589 373 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 POTEBQ6S5H4 581 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 CCNYQ8ND76 341 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 DCAF4Q8WV16 495 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 WDR60Q8WVS4 1066 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 EZH1Q92800 747 aaPredicted RBP9.65□□□□□ -0.86
COL25A1-208ENST00000610288 KIFC3Q9BVG8 833 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 ZNF341Q9BYN7 854 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 CELF4Q9BZC1 486 aaKnown RBP9.65□□□□□ -0.86
COL25A1-208ENST00000610288 NPHS2Q9NP85 383 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 PCDHA6Q9UN73 950 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 PCDHA8Q9Y5H6 950 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 ADGRB3O60242 1522 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 SPDYE16A6NNV3 312 aaPredicted RBP9.65□□□□□ -0.86
COL25A1-208ENST00000610288 STRNO43815 780 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 APOA1P02647 267 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 CYP19A1P11511 503 aaPredicted RBP9.65□□□□□ -0.86
COL25A1-208ENST00000610288 GCLMP48507 274 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 EZH2Q15910 746 aaKnown RBP9.65□□□□□ -0.86
COL25A1-208ENST00000610288 CNGA3Q16281 694 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 KYNUQ16719 465 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 SPDYE2Q495Y8 402 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 SPOPLQ6IQ16 392 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 PPM1NQ8N819 430 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 RBM15Q96T37 977 aaKnown RBP eCLIP9.65□□□□□ -0.86
COL25A1-208ENST00000610288 NRDE2Q9H7Z3 1164 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 UBN1Q9NPG3 1134 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 SEPT3Q9UH03 358 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 DUSP10Q9Y6W6 482 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 OVOS2A0A0G2JMS6 1433 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 UTYO14607 1347 aa9.65□□□□□ -0.86
COL25A1-208ENST00000610288 ZNF233A6NK53 670 aa9.65□□□□□ -0.87
COL25A1-208ENST00000610288 LIN7AO14910 233 aaPredicted RBP9.65□□□□□ -0.87
COL25A1-208ENST00000610288 PRPSAP2O60256 369 aa9.65□□□□□ -0.87
COL25A1-208ENST00000610288 PRPSAP1Q14558 356 aa9.65□□□□□ -0.87
COL25A1-208ENST00000610288 KBTBD12Q3ZCT8 623 aa9.65□□□□□ -0.87
COL25A1-208ENST00000610288 ZCWPW2Q504Y3 356 aa9.65□□□□□ -0.87
COL25A1-208ENST00000610288 ZNF746Q6NUN9 644 aaPredicted RBP9.65□□□□□ -0.87
COL25A1-208ENST00000610288 TMEM35BQ8NCS4 154 aa9.65□□□□□ -0.87
COL25A1-208ENST00000610288 RNF25Q96BH1 459 aaPredicted RBP9.65□□□□□ -0.87
COL25A1-208ENST00000610288 CEP95Q96GE4 821 aa9.65□□□□□ -0.87
COL25A1-208ENST00000610288 MASTLQ96GX5 879 aa9.65□□□□□ -0.87
COL25A1-208ENST00000610288 TRAPPC9Q96Q05 1148 aa9.65□□□□□ -0.87
COL25A1-208ENST00000610288 COQ7Q99807 217 aa9.65□□□□□ -0.87
COL25A1-208ENST00000610288 SNX25Q9H3E2 840 aa9.65□□□□□ -0.87
COL25A1-208ENST00000610288 CDC42BPGQ6DT37 1551 aa9.65□□□□□ -0.87
COL25A1-208ENST00000610288 CRKP46108 304 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 KLK7P49862 253 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 ADRM1Q16186 407 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 HIF1AQ16665 826 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 TMEM259Q4ZIN3 620 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 OR6B2Q6IFH4 312 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 ENOSF1Q7L5Y1 443 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 RAB44Q7Z6P3 723 aaPredicted RBP9.64□□□□□ -0.87
COL25A1-208ENST00000610288 ERICH1Q86X53 443 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 ACTRT1Q8TDG2 376 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 PARD3BQ8TEW8 1205 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 ZC3H15Q8WU90 426 aaKnown RBP9.64□□□□□ -0.87
COL25A1-208ENST00000610288 TRPV6Q9H1D0 765 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 PSMC3IPQ9P2W1 217 aaPredicted RBP9.64□□□□□ -0.87
COL25A1-208ENST00000610288 JCADQ9P266 1359 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 ZCCHC11Q5TAX3 1644 aaKnown RBP9.64□□□□□ -0.87
COL25A1-208ENST00000610288 KLHL33A6NCF5 533 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 UBOX5O94941 541 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 CALB1P05937 261 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 TRIM28Q13263 835 aaKnown RBP9.64□□□□□ -0.87
COL25A1-208ENST00000610288 CIAPIN1Q6FI81 312 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 TRIM72Q6ZMU5 477 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 RFX8Q6ZV50 586 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 DNAAF3Q8N9W5 541 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 CCDC124Q96CT7 223 aaKnown RBP9.64□□□□□ -0.87
COL25A1-208ENST00000610288 NSL1Q96IY1 281 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 CYP4F11Q9HBI6 524 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 SLC38A10Q9HBR0 1119 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 GNGT2O14610 69 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 PFDN6O15212 129 aa9.64□□□□□ -0.87
COL25A1-208ENST00000610288 SRGAP2BP0DMP2 458 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms